FFCP PHASE1:Mm9::chr9:108885020..108885041,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr9:108885020..108885041,+
|short_description=p3@Col7a1
|description=CAGE_peak_3_at_Col7a1_5end
|association_with_transcript=88bp_to_ENSMUST00000138588_5end
|...") |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=12836 | |EntrezGene=12836 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=92 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=88bp_to_ENSMUST00000138588_5end | |||
|cluster_id=chr9:108885020..108885041,+ | |||
|description=CAGE_peak_3_at_Col7a1_5end | |||
|id=chr9:108885020..108885041,+ | |||
|ontology_enrichment_celltype=CL:0000215!1.28e-08!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000217,5.12e-21,2;CL:0000328,5.12e-21,2;CL:0002573,5.12e-21,2;CL:0002376,5.12e-21,2;CL:0000218,5.12e-21,2;CL:0000692,5.12e-21,2;CL:0002377,5.12e-21,2;CL:0002375,5.12e-21,2;CL:0000215,2.32e-14,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002369!1.94e-18!7;UBERON:0006858!1.94e-18!7;UBERON:0003064!4.04e-17!14;UBERON:0002342!1.50e-12!10;UBERON:0005062!1.50e-12!10;UBERON:0000011!7.26e-08!3;UBERON:0000010!8.21e-08!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002369,1.36e-49,7;UBERON:0006858,1.36e-49,7;UBERON:0003064,1.56e-33,14;UBERON:0000998,1.12e-10,1;UBERON:0007194,1.12e-10,1;UBERON:0006868,1.12e-10,1;UBERON:0005256,2.19e-10,45;UBERON:0005172,1.60e-09,49;UBERON:0005173,1.60e-09,49;UBERON:0002417,1.60e-09,49;UBERON:0000916,1.60e-09,49;UBERON:0003104,1.33e-07,61;UBERON:0009142,1.33e-07,61;UBERON:0002530,4.08e-07,65;UBERON:0009569,5.28e-07,66 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449949858640699,0,0,0,0,0,0,0.210324961351382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.99585751998029,5.2144376473682,0.289864488701678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.505524445014783,0,0,1.63286352971307,1.73485326766136,4.26251669636998,3.68984795609694,5.87818298155228,4.11560474974967,0.502666365318702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.228497025219458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275936746304732,0,0.117211686592203,0,0,0,0,0,0.477937595905104,0.445597348164788,0.283076530788832,0.404810701674894,0,0,0,0,0,0,0,0,0,0.302323556964751,0,0,0,0,0,0,0,0,0,0.680879211507576,0,0,0,0,0,0,0.608929898229199,0,0,0.661585194164886,0.16488625294148,0.484393280087717,0,0,0,0,0,0,0.206386867963223,0.370389054739423,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168956125490778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0762068066549998,0,0,0,0,0,0,0,0,0,0.187682475451182,0,0,1.00314420807073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252697211763798,0,0,0,0,0,0,0,0,0.412085900803307,0,0,0,0,0,0.0941093804153306,0,0.182927972872773,0,0,0,0,0.29551344712669,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449949858640699,0,0,0,0,0,0,0.210324961351382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.99585751998029,5.2144376473682,0.289864488701678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.505524445014783,0,0,1.63286352971307,1.73485326766136,4.26251669636998,3.68984795609694,5.87818298155228,4.11560474974967,0.502666365318702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.228497025219458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275936746304732,0,0.117211686592203,0,0,0,0,0,0.477937595905104,0.445597348164788,0.283076530788832,0.404810701674894,0,0,0,0,0,0,0,0,0,0.302323556964751,0,0,0,0,0,0,0,0,0,0.680879211507576,0,0,0,0,0,0,0.608929898229199,0,0,0.661585194164886,0.16488625294148,0.484393280087717,0,0,0,0,0,0,0.206386867963223,0.370389054739423,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168956125490778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0762068066549998,0,0,0,0,0,0,0,0,0,0.187682475451182,0,0,1.00314420807073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252697211763798,0,0,0,0,0,0,0,0,0.412085900803307,0,0,0,0,0,0.0941093804153306,0,0.182927972872773,0,0,0,0,0.29551344712669,0,0,0,0,0,0,0,0,0 | ||
|short_description=p3@Col7a1 | |||
}} | }} |
Latest revision as of 04:42, 26 September 2015
Short description: | p3@Col7a1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Col7a1_5end |
Coexpression cluster: | MCL_coexpression_mm9:92 |
Association with transcript: | 88bp_to_ENSMUST00000138588_5end |
EntrezGene: | Col7a1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
insulating cell | 5.12e-21 | 2 |
myelin accumulating cell | 5.12e-21 | 2 |
Schwann cell | 5.12e-21 | 2 |
non-myelinating Schwann cell | 5.12e-21 | 2 |
myelinating Schwann cell;;Schwann cell | 5.12e-21 | 2 |
terminal Schwann cell | 5.12e-21 | 2 |
immature Schwann cell | 5.12e-21 | 2 |
Schwann cell precursor | 5.12e-21 | 2 |
barrier cell | 2.32e-14 | 3 |
Ontology term | p-value | n |
---|---|---|
adrenal gland | 1.36e-49 | 7 |
adrenal/interrenal gland | 1.36e-49 | 7 |
intermediate mesoderm | 1.56e-33 | 14 |
seminal vesicle | 1.12e-10 | 1 |
vesicular gland | 1.12e-10 | 1 |
seminal fluid secreting gland | 1.12e-10 | 1 |
trunk mesenchyme | 2.19e-10 | 45 |
abdomen element | 1.60e-09 | 49 |
abdominal segment element | 1.60e-09 | 49 |
abdominal segment of trunk | 1.60e-09 | 49 |
abdomen | 1.60e-09 | 49 |
mesenchyme | 1.33e-07 | 61 |
entire embryonic mesenchyme | 1.33e-07 | 61 |
gland | 4.08e-07 | 65 |
subdivision of trunk | 5.28e-07 | 66 |