UBERON:0000341: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{UBERON
|id=UBERON:0000341
|name=throat
|namespace=
|def="In anatomy, the throat is the anterior part of the neck, in front of the vertebral column. It consists of the ph...") |
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{{UBERON | {{UBERON | ||
|alt_id=UBERON:BTO_0000828-FMA_228738 | |alt_id=UBERON:BTO_0000828-FMA_228738 | ||
| | |comment=Taxon notes: The hyoid bone and the clavicle are the only bones located in the throat of mammals. | ||
|created_by= | |created_by= | ||
| | |def="In anatomy, the throat is the anterior part of the neck, in front of the vertebral column. It consists of the pharynx and larynx. An important feature of the throat is the epiglottis, a flap which separates the esophagus from the trachea and prevents inhalation of food or drink. The throat contains various blood vessels, various pharyngeal muscles, the trachea (windpipe) and the esophagus. The hyoid bone and the clavicle are the only bones located in the throat of mammals. It is sometimes considered a synonym for fauces. [WP,unvetted]." [Wikipedia:Throat] | ||
|derives_from= | |derives_from= | ||
|develops_from= | |develops_from= | ||
|disjoint_from= | |||
|has_quality= | |has_quality= | ||
|id=UBERON:0000341 | |||
|is_a=UBERON:0000475 | |||
|is_obsolete= | |||
|located_in= | |located_in= | ||
|name=throat | |||
|namespace=FANTOM | |||
|obo_creation_date= | |||
|part_of=UBERON:0000974 | |part_of=UBERON:0000974 | ||
|preceded_by= | |||
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | |property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | ||
|subset= | |||
|synonym="gula" RELATED LATIN [] | |||
|union_of= | |||
|xref=BTO:0000828;;FMA:228738;;http://upload.wikimedia.org/wikipedia/commons/1/16/Throat_Diagram.png;;http://upload.wikimedia.org/wikipedia/commons/thumb/1/16/Throat_Diagram.png/200px-Throat_Diagram.png;;ncithesaurus:Throat;;OpenCyc:Mx4rwQtO_JwpEbGdrcN5Y29ycA | |||
}} | }} | ||
Latest revision as of 17:08, 12 September 2014
| Name: | throat | ||
|---|---|---|---|
| Namespace: | FANTOM | ||
| Definition: | "In anatomy, the throat is the anterior part of the neck, in front of the vertebral column. It consists of the pharynx and larynx. An important feature of the throat is the epiglottis, a flap which separates the esophagus from the trachea and prevents inhalation of food or drink. The throat contains various blood vessels, various pharyngeal muscles, the trachea (windpipe) and the esophagus. The hyoid bone and the clavicle are the only bones located in the throat of mammals. It is sometimes considered a synonym for fauces. [WP,unvetted]." [Wikipedia:Throat] | ||
| Xrefs: |
| ||
| Synonyms: | "gula" RELATED LATIN [] | ||
| Comments: | Taxon notes: The hyoid bone and the clavicle are the only bones located in the throat of mammals. | ||
| Alt_id: | UBERON:BTO_0000828-FMA_228738 |
Throat_Diagram.png]
200px-Throat_Diagram.png]
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0000475(organism subdivision) |
|---|---|
| part_of: | UBERON:0000974(neck) |
Children
| derives from: | FF:0010061 (human throat - fetal sample),FF:0010209 (human throat - adult sample) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 10061-101H7 (throat, fetal, donor1)
- 10209-103G2 (throat, adult)
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0000341 (throat), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 1.75e-130 | FFCP PHASE2:Hg19::chr8:134014503..134014513,+#_6a4a112d45f2cd45f940ddb91ddda90d | p@chr8:134014503..134014513, + |
| 1.75e-130 | FFCP PHASE1:Hg19::chr8:134014503..134014513,+#_6a4a112d45f2cd45f940ddb91ddda90d | p@chr8:134014503..134014513, + |
| 1.55e-98 | FFCP PHASE1:Hg19::chr19:20069252..20069265,+#_ac2137c8acdb170e1a00921a9a9562e2 | p@chr19:20069252..20069265, + |
| 1.55e-98 | FFCP PHASE2:Hg19::chr19:20069252..20069265,+#_ac2137c8acdb170e1a00921a9a9562e2 | p@chr19:20069252..20069265, + |
| 2.56e-98 | FFCP PHASE2:Hg19::chr8:133913683..133913714,+#_cba5fd8d45d1c29395b843da81327285 | p@chr8:133913683..133913714, + |
| 2.56e-98 | FFCP PHASE1:Hg19::chr8:134034341..134034352,+#_cba5fd8d45d1c29395b843da81327285 | p@chr8:134034341..134034352, + |
| 2.56e-98 | FFCP PHASE2:Hg19::chr8:133895067..133895092,+#_cba5fd8d45d1c29395b843da81327285 | p@chr8:133895067..133895092, + |
| 2.56e-98 | FFCP PHASE2:Hg19::chr14:81423508..81423524,+#_cba5fd8d45d1c29395b843da81327285 | p@chr14:81423508..81423524, + |
| 2.56e-98 | FFCP PHASE1:Hg19::chr8:133913683..133913714,+#_cba5fd8d45d1c29395b843da81327285 | p@chr8:133913683..133913714, + |
| 2.56e-98 | FFCP PHASE2:Hg19::chr8:133898696..133898713,+#_cba5fd8d45d1c29395b843da81327285 | p@chr8:133898696..133898713, + |
| 2.56e-98 | FFCP PHASE1:Hg19::chr8:133895067..133895092,+#_cba5fd8d45d1c29395b843da81327285 | p@chr8:133895067..133895092, + |
| 2.56e-98 | FFCP PHASE2:Hg19::chr8:134034341..134034352,+#_cba5fd8d45d1c29395b843da81327285 | p@chr8:134034341..134034352, + |
| 2.56e-98 | FFCP PHASE1:Hg19::chr8:133898696..133898713,+#_cba5fd8d45d1c29395b843da81327285 | p@chr8:133898696..133898713, + |
| 2.56e-98 | FFCP PHASE1:Hg19::chr14:81423508..81423524,+#_cba5fd8d45d1c29395b843da81327285 | p@chr14:81423508..81423524, + |
| 2.56e-98 | FFCP PHASE1:Hg19::chr2:107982023..107982034,-#_cba5fd8d45d1c29395b843da81327285 | p1@ENST00000455614 |
| 2.56e-98 | FFCP PHASE2:Hg19::chr8:134003178..134003182,+#_cba5fd8d45d1c29395b843da81327285 | p@chr8:134003178..134003182, + |
| 2.56e-98 | FFCP PHASE1:Hg19::chr8:134128842..134128885,+#_cba5fd8d45d1c29395b843da81327285 | p@chr8:134128842..134128885, + |
| 2.56e-98 | FFCP PHASE2:Hg19::chr8:133883676..133883697,+#_cba5fd8d45d1c29395b843da81327285 | p@chr8:133883676..133883697, + |
| 2.56e-98 | FFCP PHASE1:Hg19::chr8:134003178..134003182,+#_cba5fd8d45d1c29395b843da81327285 | p@chr8:134003178..134003182, + |
| 2.56e-98 | FFCP PHASE2:Hg19::chr8:133885405..133885431,+#_cba5fd8d45d1c29395b843da81327285 | p@chr8:133885405..133885431, + |
| 2.56e-98 | FFCP PHASE2:Hg19::chr2:107982023..107982034,-#_cba5fd8d45d1c29395b843da81327285 | p1@ENST00000455614 |
| 2.56e-98 | FFCP PHASE1:Hg19::chr8:133885405..133885431,+#_cba5fd8d45d1c29395b843da81327285 | p@chr8:133885405..133885431, + |
| 2.56e-98 | FFCP PHASE1:Hg19::chr8:133883676..133883697,+#_cba5fd8d45d1c29395b843da81327285 | p@chr8:133883676..133883697, + |
| 2.56e-98 | FFCP PHASE2:Hg19::chr8:134128842..134128885,+#_cba5fd8d45d1c29395b843da81327285 | p@chr8:134128842..134128885, + |
| 4.22e-98 | FFCP PHASE2:Hg19::chr8:133899540..133899551,+#_ddab48d8677bcf806847f537fc8d3491 | p@chr8:133899540..133899551, + |
| 4.22e-98 | FFCP PHASE2:Hg19::chr9:100615264..100615293,-#_ddab48d8677bcf806847f537fc8d3491 | p@chr9:100615264..100615293, - |
| 4.22e-98 | FFCP PHASE1:Hg19::chr8:133899540..133899551,+#_ddab48d8677bcf806847f537fc8d3491 | p@chr8:133899540..133899551, + |
| 4.22e-98 | FFCP PHASE2:Hg19::chr8:133883748..133883766,+#_ddab48d8677bcf806847f537fc8d3491 | p@chr8:133883748..133883766, + |
| 4.22e-98 | FFCP PHASE1:Hg19::chr6:150691647..150691660,+#_ddab48d8677bcf806847f537fc8d3491 | p@chr6:150691647..150691660, + |
| 4.22e-98 | FFCP PHASE2:Hg19::chr8:133885349..133885365,+#_ddab48d8677bcf806847f537fc8d3491 | p@chr8:133885349..133885365, + |
| 4.22e-98 | FFCP PHASE2:Hg19::chr16:29801543..29801555,+#_ddab48d8677bcf806847f537fc8d3491 | p7@KIF22 |
| 4.22e-98 | FFCP PHASE2:Hg19::chr6:150691626..150691644,+#_ddab48d8677bcf806847f537fc8d3491 | p@chr6:150691626..150691644, + |
| 4.22e-98 | FFCP PHASE1:Hg19::chr18:24321768..24321782,-#_ddab48d8677bcf806847f537fc8d3491 | p@chr18:24321768..24321782, - |
| 4.22e-98 | FFCP PHASE1:Hg19::chr8:133885349..133885365,+#_ddab48d8677bcf806847f537fc8d3491 | p@chr8:133885349..133885365, + |
| 4.22e-98 | FFCP PHASE2:Hg19::chr7:107302560..107302575,-#_ddab48d8677bcf806847f537fc8d3491 | p2@ENST00000449741 |
| 4.22e-98 | FFCP PHASE1:Hg19::chr8:133883748..133883766,+#_ddab48d8677bcf806847f537fc8d3491 | p@chr8:133883748..133883766, + |
| 4.22e-98 | FFCP PHASE2:Hg19::chr8:133885382..133885403,+#_ddab48d8677bcf806847f537fc8d3491 | p@chr8:133885382..133885403, + |
| 4.22e-98 | FFCP PHASE2:Hg19::chr6:150691647..150691660,+#_ddab48d8677bcf806847f537fc8d3491 | p@chr6:150691647..150691660, + |
| 4.22e-98 | FFCP PHASE1:Hg19::chr7:107302560..107302575,-#_ddab48d8677bcf806847f537fc8d3491 | p2@ENST00000449741 |
| 4.22e-98 | FFCP PHASE1:Hg19::chr8:133885382..133885403,+#_ddab48d8677bcf806847f537fc8d3491 | p@chr8:133885382..133885403, + |
| 4.22e-98 | FFCP PHASE1:Hg19::chr16:29801543..29801555,+#_ddab48d8677bcf806847f537fc8d3491 | p7@KIF22 |
| 4.22e-98 | FFCP PHASE2:Hg19::chr8:133898951..133898986,+#_ddab48d8677bcf806847f537fc8d3491 | p@chr8:133898951..133898986, + |
| 4.22e-98 | FFCP PHASE2:Hg19::chr14:81421452..81421462,+#_ddab48d8677bcf806847f537fc8d3491 | p8@TSHR |
| 4.22e-98 | FFCP PHASE2:Hg19::chr18:24321768..24321782,-#_ddab48d8677bcf806847f537fc8d3491 | p@chr18:24321768..24321782, - |
| 4.22e-98 | FFCP PHASE2:Hg19::chr8:133894809..133894822,-#_ddab48d8677bcf806847f537fc8d3491 | p@chr8:133894809..133894822, - |
| 4.22e-98 | FFCP PHASE1:Hg19::chr8:133898951..133898986,+#_ddab48d8677bcf806847f537fc8d3491 | p@chr8:133898951..133898986, + |
| 4.22e-98 | FFCP PHASE2:Hg19::chr8:133898827..133898844,+#_ddab48d8677bcf806847f537fc8d3491 | p@chr8:133898827..133898844, + |
| 4.22e-98 | FFCP PHASE2:Hg19::chr8:133900622..133900639,+#_ddab48d8677bcf806847f537fc8d3491 | p@chr8:133900622..133900639, + |
| 4.22e-98 | FFCP PHASE1:Hg19::chr8:133894809..133894822,-#_ddab48d8677bcf806847f537fc8d3491 | p@chr8:133894809..133894822, - |
| 4.22e-98 | FFCP PHASE1:Hg19::chr6:154669280..154669293,-#_ddab48d8677bcf806847f537fc8d3491 | p@chr6:154669280..154669293, - |
| 4.22e-98 | FFCP PHASE1:Hg19::chr8:133898827..133898844,+#_ddab48d8677bcf806847f537fc8d3491 | p@chr8:133898827..133898844, + |
| 4.22e-98 | FFCP PHASE2:Hg19::chr8:133880402..133880425,+#_ddab48d8677bcf806847f537fc8d3491 | p@chr8:133880402..133880425, + |
| 4.22e-98 | FFCP PHASE1:Hg19::chr8:133900622..133900639,+#_ddab48d8677bcf806847f537fc8d3491 | p@chr8:133900622..133900639, + |
| 4.22e-98 | FFCP PHASE1:Hg19::chr14:81421452..81421462,+#_ddab48d8677bcf806847f537fc8d3491 | p8@TSHR |
| 4.22e-98 | FFCP PHASE1:Hg19::chr9:100615264..100615293,-#_ddab48d8677bcf806847f537fc8d3491 | p@chr9:100615264..100615293, - |
| 4.22e-98 | FFCP PHASE1:Hg19::chr6:150691626..150691644,+#_ddab48d8677bcf806847f537fc8d3491 | p@chr6:150691626..150691644, + |
| 4.22e-98 | FFCP PHASE2:Hg19::chr6:154669280..154669293,-#_ddab48d8677bcf806847f537fc8d3491 | p@chr6:154669280..154669293, - |
| 4.22e-98 | FFCP PHASE1:Hg19::chr8:133880402..133880425,+#_ddab48d8677bcf806847f537fc8d3491 | p@chr8:133880402..133880425, + |
| 2.34e-79 | FFCP PHASE2:Hg19::chr14:36645767..36645777,-#_be274978bacd5f59fc76f5c1b0e54f3a | p2@ENST00000556013 |
| 2.34e-79 | FFCP PHASE1:Hg19::chr14:36645767..36645777,-#_be274978bacd5f59fc76f5c1b0e54f3a | p2@ENST00000556013 |
| 3.49e-79 | FFCP PHASE1:Hg19::chr18:53858147..53858168,-#_8003ea9f6485554ad6a7659d42f5235e | p1@ENST00000382897 |
| 3.49e-79 | FFCP PHASE2:Hg19::chr18:53858147..53858168,-#_8003ea9f6485554ad6a7659d42f5235e | p1@ENST00000382897 |
| 5.22e-79 | FFCP PHASE1:Hg19::chr8:134015669..134015678,+#_420ba3c74fcda0764df3b392ad16e5b1 | p@chr8:134015669..134015678, + |
| 5.22e-79 | FFCP PHASE1:Hg19::chr1:226321114..226321123,+#_420ba3c74fcda0764df3b392ad16e5b1 | p@chr1:226321114..226321123, + |
| 5.22e-79 | FFCP PHASE1:Hg19::chr14:81421861..81421875,+#_420ba3c74fcda0764df3b392ad16e5b1 | p5@TSHR |
| 5.22e-79 | FFCP PHASE2:Hg19::chr14:81422021..81422032,+#_420ba3c74fcda0764df3b392ad16e5b1 | p6@TSHR |
| 5.22e-79 | FFCP PHASE1:Hg19::chr6:154669238..154669256,-#_420ba3c74fcda0764df3b392ad16e5b1 | p@chr6:154669238..154669256, - |
| 5.22e-79 | FFCP PHASE1:Hg19::chr12:101962128..101962133,+#_420ba3c74fcda0764df3b392ad16e5b1 | p19@MYBPC1 |
| 5.22e-79 | FFCP PHASE1:Hg19::chr8:134144086..134144098,+#_420ba3c74fcda0764df3b392ad16e5b1 | p@chr8:134144086..134144098, + |
| 5.22e-79 | FFCP PHASE1:Hg19::chr14:81422021..81422032,+#_420ba3c74fcda0764df3b392ad16e5b1 | p6@TSHR |
| 5.22e-79 | FFCP PHASE2:Hg19::chr6:154669238..154669256,-#_420ba3c74fcda0764df3b392ad16e5b1 | p@chr6:154669238..154669256, - |
| 5.22e-79 | FFCP PHASE2:Hg19::chr12:101962128..101962133,+#_420ba3c74fcda0764df3b392ad16e5b1 | p19@MYBPC1 |
| 5.22e-79 | FFCP PHASE1:Hg19::chr9:129184039..129184052,+#_420ba3c74fcda0764df3b392ad16e5b1 | p17@FAM125B |
| 5.22e-79 | FFCP PHASE2:Hg19::chr8:134144086..134144098,+#_420ba3c74fcda0764df3b392ad16e5b1 | p@chr8:134144086..134144098, + |
| 5.22e-79 | FFCP PHASE2:Hg19::chr8:134015669..134015678,+#_420ba3c74fcda0764df3b392ad16e5b1 | p@chr8:134015669..134015678, + |
| 5.22e-79 | FFCP PHASE2:Hg19::chr14:81421861..81421875,+#_420ba3c74fcda0764df3b392ad16e5b1 | p5@TSHR |
| 5.22e-79 | FFCP PHASE2:Hg19::chr1:226321114..226321123,+#_420ba3c74fcda0764df3b392ad16e5b1 | p@chr1:226321114..226321123, + |
| 5.22e-79 | FFCP PHASE2:Hg19::chr9:129184039..129184052,+#_420ba3c74fcda0764df3b392ad16e5b1 | p17@FAM125B |
| 7.79e-79 | FFCP PHASE1:Hg19::chr19:20068797..20068802,+#_7aecbf98e8dd33070d3ff0eb0f8ac4e8 | p@chr19:20068797..20068802, + |
| 7.79e-79 | FFCP PHASE2:Hg19::chr19:20068797..20068802,+#_7aecbf98e8dd33070d3ff0eb0f8ac4e8 | p@chr19:20068797..20068802, + |
| 1.16e-78 | FFCP PHASE2:Hg19::chr1:1848214..1848240,+#_9e677f1d811c1f809587be4befa37824 | p@chr1:1848214..1848240, + |
| 1.16e-78 | FFCP PHASE1:Hg19::chr1:1848214..1848240,+#_9e677f1d811c1f809587be4befa37824 | p@chr1:1848214..1848240, + |
| 1.16e-78 | FFCP PHASE1:Hg19::chrX:125953692..125953697,+#_9e677f1d811c1f809587be4befa37824 | p3@CXorf64 |
| 1.16e-78 | FFCP PHASE2:Hg19::chrX:125953692..125953697,+#_9e677f1d811c1f809587be4befa37824 | p3@CXorf64 |
| 1.45e-66 | FFCP PHASE1:Hg19::chr6:150498089..150498126,+#_c2039a9c501d420c9161be61623bf8a2 | p@chr6:150498089..150498126, + |
| 1.45e-66 | FFCP PHASE2:Hg19::chr6:150498089..150498126,+#_c2039a9c501d420c9161be61623bf8a2 | p@chr6:150498089..150498126, + |
| 2.84e-66 | FFCP PHASE2:Hg19::chr14:81423482..81423496,+#_56173dfbe46fa89d7ed9ed6623d56c35 | p@chr14:81423482..81423496, + |
| 2.84e-66 | FFCP PHASE2:Hg19::chr6:2744361..2744382,-#_56173dfbe46fa89d7ed9ed6623d56c35 | p@chr6:2744361..2744382, - |
| 2.84e-66 | FFCP PHASE1:Hg19::chr14:81423482..81423496,+#_56173dfbe46fa89d7ed9ed6623d56c35 | p@chr14:81423482..81423496, + |
| 2.84e-66 | FFCP PHASE1:Hg19::chr6:117597244..117597253,+#_56173dfbe46fa89d7ed9ed6623d56c35 | p@chr6:117597244..117597253, + |
| 2.84e-66 | FFCP PHASE2:Hg19::chr20:17608030..17608041,-#_56173dfbe46fa89d7ed9ed6623d56c35 | p@chr20:17608030..17608041, - |
| 2.84e-66 | FFCP PHASE1:Hg19::chr20:17608030..17608041,-#_56173dfbe46fa89d7ed9ed6623d56c35 | p@chr20:17608030..17608041, - |
| 2.84e-66 | FFCP PHASE2:Hg19::chr6:117597244..117597253,+#_56173dfbe46fa89d7ed9ed6623d56c35 | p@chr6:117597244..117597253, + |
| 2.84e-66 | FFCP PHASE1:Hg19::chr6:2744361..2744382,-#_56173dfbe46fa89d7ed9ed6623d56c35 | p@chr6:2744361..2744382, - |
| 3.96e-66 | FFCP PHASE2:Hg19::chr14:36990416..36990438,-#_31d9fa3764afb14f1582afd809951a07 | p4@NKX2-1 |
| 3.96e-66 | FFCP PHASE1:Hg19::chr2:241079761..241079791,-#_31d9fa3764afb14f1582afd809951a07 | p3@OTOS |
| 3.96e-66 | FFCP PHASE2:Hg19::chr2:241079761..241079791,-#_31d9fa3764afb14f1582afd809951a07 | p3@OTOS |
| 3.96e-66 | FFCP PHASE2:Hg19::chr14:81423399..81423412,+#_31d9fa3764afb14f1582afd809951a07 | p@chr14:81423399..81423412, + |
| 3.96e-66 | FFCP PHASE1:Hg19::chr14:36990416..36990438,-#_31d9fa3764afb14f1582afd809951a07 | p4@NKX2-1 |
| 3.96e-66 | FFCP PHASE2:Hg19::chr8:133894129..133894154,+#_31d9fa3764afb14f1582afd809951a07 | p3@TG |
