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(Created page with "{{UBERON |id=UBERON:0004914 |name=duodenal papilla |namespace= |def="." [Wikipedia:Major_duodenal_papilla, Wikipedia:Minor_duodenal_papilla] |xref=EMAPA:18662;;EMAPA:1885...")
 
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{{UBERON
{{UBERON
|id=UBERON:0004914
|alt_id=
|name=duodenal papilla
|namespace=
|def="." [Wikipedia:Major_duodenal_papilla, Wikipedia:Minor_duodenal_papilla]
|xref=EMAPA:18662;;EMAPA:18853;;FMA:15953;;http://upload.wikimedia.org/wikipedia/commons/thumb/4/43/Gray1057.png/200px-Gray1057.png;;SCTID:245389007
|is_a=UBERON:0000061;;UBERON:0004119
|synonym="papilla of duodenum" EXACT []
|comment=
|comment=
|alt_id=
|disjoint_from=
|union_of=
|created_by=
|created_by=
|obo_creation_date=
|def="." [Wikipedia:Major_duodenal_papilla, Wikipedia:Minor_duodenal_papilla]
|subset=
|adjacent_to=
|derives_from=
|derives_from=
|develops_from=
|develops_from=
|disjoint_from=
|has_quality=
|has_quality=
|id=UBERON:0004914
|is_a=UBERON:0000063
|is_obsolete=
|located_in=
|located_in=
|name=duodenal papilla
|namespace=FANTOM
|obo_creation_date=
|part_of=UBERON:0002114
|part_of=UBERON:0002114
|preceded_by=
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|subset=
|synonym="papilla duodeni major" RELATED LATIN [Wikipedia:Major_duodenal_papilla];;"papilla duodeni minor" RELATED LATIN [Wikipedia:Minor_duodenal_papilla];;"papilla of duodenum" EXACT []
|union_of=
|xref=EMAPA:18662;;EMAPA:18853;;FMA:15953;;http://upload.wikimedia.org/wikipedia/commons/4/43/Gray1057.png;;http://upload.wikimedia.org/wikipedia/commons/thumb/4/43/Gray1057.png/200px-Gray1057.png;;SCTID:245389007
}}
}}

Latest revision as of 17:49, 12 September 2014

Name:duodenal papilla
Namespace:FANTOM
Definition:"." [Wikipedia:Major_duodenal_papilla, Wikipedia:Minor_duodenal_papilla]
Xrefs:
links:

EMAPA:18662
EMAPA:18853
FMA:15953
[ Gray1057.png Gray1057.png]
[ 200px-Gray1057.png 200px-Gray1057.png]

SCTID:245389007
Synonyms: "papilla duodeni major" RELATED LATIN [Wikipedia:Major_duodenal_papilla]
"papilla duodeni minor" RELATED LATIN [Wikipedia:Minor_duodenal_papilla]
"papilla of duodenum" EXACT []

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:UBERON:0000063(organ segment)
part_of:UBERON:0002114(duodenum)



Children

part of:UBERON:0004913 (hepatopancreatic ampulla)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology

Human (Homo sapiens)

  • 10417-106C3 (papillotubular adenocarcinoma cell line:TGBC18TKB)


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0004914 (duodenal papilla), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
5.42e-195FFCP PHASE1:Hg19::chr7:98796685..98796688,-#_0fe5009f66aaeeb44bd59d3d512b30a1p@chr7:98796685..98796688, -
5.42e-195FFCP PHASE2:Hg19::chr7:98796685..98796688,-#_0fe5009f66aaeeb44bd59d3d512b30a1p@chr7:98796685..98796688, -
5.42e-195FFCP PHASE1:Hg19::chr19:15923954..15923958,-#_0fe5009f66aaeeb44bd59d3d512b30a1p@chr19:15923954..15923958, -
5.42e-195FFCP PHASE1:Hg19::chr7:99779265..99779276,+#_0fe5009f66aaeeb44bd59d3d512b30a1p15@STAG3
5.42e-195FFCP PHASE2:Hg19::chr19:15923954..15923958,-#_0fe5009f66aaeeb44bd59d3d512b30a1p@chr19:15923954..15923958, -
5.42e-195FFCP PHASE2:Hg19::chr7:99779265..99779276,+#_0fe5009f66aaeeb44bd59d3d512b30a1p15@STAG3
5.42e-195FFCP PHASE1:Hg19::chr19:49545691..49545692,+#_0fe5009f66aaeeb44bd59d3d512b30a1p@chr19:49545691..49545692, +
5.42e-195FFCP PHASE2:Hg19::chr19:49545691..49545692,+#_0fe5009f66aaeeb44bd59d3d512b30a1p@chr19:49545691..49545692, +
5.42e-195FFCP PHASE2:Hg19::chr15:20093569..20093572,+#_0fe5009f66aaeeb44bd59d3d512b30a1p@chr15:20093569..20093572, +
5.42e-195FFCP PHASE1:Hg19::chr7:98807901..98807908,-#_0fe5009f66aaeeb44bd59d3d512b30a1p@chr7:98807901..98807908, -
5.42e-195FFCP PHASE1:Hg19::chr15:20093569..20093572,+#_0fe5009f66aaeeb44bd59d3d512b30a1p@chr15:20093569..20093572, +
5.42e-195FFCP PHASE2:Hg19::chr7:98807901..98807908,-#_0fe5009f66aaeeb44bd59d3d512b30a1p@chr7:98807901..98807908, -
9.37e-99FFCP PHASE1:Hg19::chr7:98595103..98595105,-#_617dc7993ff40cab98065cf1bab8e9d8p@chr7:98595103..98595105, -
9.37e-99FFCP PHASE2:Hg19::chr7:98595103..98595105,-#_617dc7993ff40cab98065cf1bab8e9d8p@chr7:98595103..98595105, -
9.37e-99FFCP PHASE2:Hg19::chr3:139035972..139036016,-#_617dc7993ff40cab98065cf1bab8e9d8p@chr3:139035972..139036016, -
9.37e-99FFCP PHASE1:Hg19::chr19:49545646..49545652,+#_617dc7993ff40cab98065cf1bab8e9d8p@chr19:49545646..49545652, +
9.37e-99FFCP PHASE1:Hg19::chr3:139035972..139036016,-#_617dc7993ff40cab98065cf1bab8e9d8p@chr3:139035972..139036016, -
9.37e-99FFCP PHASE2:Hg19::chr19:49545646..49545652,+#_617dc7993ff40cab98065cf1bab8e9d8p@chr19:49545646..49545652, +
2.55e-98FFCP PHASE2:Hg19::chr20:61339609..61339610,+#_977aa70ade478f8553a2ee71e65f0e08p@chr20:61339609..61339610, +
2.55e-98FFCP PHASE2:Hg19::chr7:98870980..98870981,+#_977aa70ade478f8553a2ee71e65f0e08p8@MYH16
2.55e-98FFCP PHASE2:Hg19::chr2:40184895..40184905,-#_977aa70ade478f8553a2ee71e65f0e08p@chr2:40184895..40184905, -
2.55e-98FFCP PHASE1:Hg19::chr2:40184895..40184905,-#_977aa70ade478f8553a2ee71e65f0e08p@chr2:40184895..40184905, -
2.55e-98FFCP PHASE2:Hg19::chr11:69867159..69867175,-#_977aa70ade478f8553a2ee71e65f0e08p3@ENST00000528507
2.55e-98FFCP PHASE1:Hg19::chr7:98870790..98870795,+#_977aa70ade478f8553a2ee71e65f0e08p7@MYH16
2.55e-98FFCP PHASE1:Hg19::chr13:23368290..23368299,+#_977aa70ade478f8553a2ee71e65f0e08p@chr13:23368290..23368299, +
2.55e-98FFCP PHASE2:Hg19::chr7:98870790..98870795,+#_977aa70ade478f8553a2ee71e65f0e08p7@MYH16
2.55e-98FFCP PHASE1:Hg19::chr11:69867159..69867175,-#_977aa70ade478f8553a2ee71e65f0e08p3@ENST00000528507
2.55e-98FFCP PHASE1:Hg19::chr22:30653778..30653783,-#_977aa70ade478f8553a2ee71e65f0e08p@chr22:30653778..30653783, -
2.55e-98FFCP PHASE2:Hg19::chr7:150037547..150037552,-#_977aa70ade478f8553a2ee71e65f0e08p10@RARRES2
2.55e-98FFCP PHASE1:Hg19::chr7:150037547..150037552,-#_977aa70ade478f8553a2ee71e65f0e08p10@RARRES2
2.55e-98FFCP PHASE2:Hg19::chr13:23368290..23368299,+#_977aa70ade478f8553a2ee71e65f0e08p@chr13:23368290..23368299, +
2.55e-98FFCP PHASE1:Hg19::chr20:61339609..61339610,+#_977aa70ade478f8553a2ee71e65f0e08p@chr20:61339609..61339610, +
2.55e-98FFCP PHASE2:Hg19::chr22:30653778..30653783,-#_977aa70ade478f8553a2ee71e65f0e08p@chr22:30653778..30653783, -
2.55e-98FFCP PHASE1:Hg19::chr7:98870980..98870981,+#_977aa70ade478f8553a2ee71e65f0e08p8@MYH16
1.23e-66FFCP PHASE2:Hg19::chr6:1054763..1054800,-#_f26b942b92d07224d2ab4f0d8ad1209ep@chr6:1054763..1054800, -
1.23e-66FFCP PHASE1:Hg19::chr6:1054763..1054800,-#_f26b942b92d07224d2ab4f0d8ad1209ep@chr6:1054763..1054800, -
1.23e-66FFCP PHASE1:Hg19::chr13:107026326..107026335,-#_f26b942b92d07224d2ab4f0d8ad1209ep@chr13:107026326..107026335, -
1.23e-66FFCP PHASE1:Hg19::chr19:49545674..49545685,+#_f26b942b92d07224d2ab4f0d8ad1209ep@chr19:49545674..49545685, +
1.23e-66FFCP PHASE2:Hg19::chr19:49545674..49545685,+#_f26b942b92d07224d2ab4f0d8ad1209ep@chr19:49545674..49545685, +
1.23e-66FFCP PHASE1:Hg19::chr4:143369478..143369483,-#_f26b942b92d07224d2ab4f0d8ad1209ep@chr4:143369478..143369483, -
1.23e-66FFCP PHASE2:Hg19::chr4:143369478..143369483,-#_f26b942b92d07224d2ab4f0d8ad1209ep@chr4:143369478..143369483, -
1.23e-66FFCP PHASE2:Hg19::chr13:107026326..107026335,-#_f26b942b92d07224d2ab4f0d8ad1209ep@chr13:107026326..107026335, -
1.23e-66FFCP PHASE1:Hg19::chr19:51462404..51462413,-#_f26b942b92d07224d2ab4f0d8ad1209ep@chr19:51462404..51462413, -
1.23e-66FFCP PHASE2:Hg19::chr19:51462404..51462413,-#_f26b942b92d07224d2ab4f0d8ad1209ep@chr19:51462404..51462413, -
2.39e-66FFCP PHASE1:Hg19::chr7:98870435..98870449,+#_9415bb90864644f7bca774435d7a4c35p6@MYH16
2.39e-66FFCP PHASE2:Hg19::chr7:98870435..98870449,+#_9415bb90864644f7bca774435d7a4c35p6@MYH16
2.39e-66FFCP PHASE1:Hg19::chr3:170626681..170626687,+#_9415bb90864644f7bca774435d7a4c35p@chr3:170626681..170626687, +
2.39e-66FFCP PHASE2:Hg19::chr3:170626681..170626687,+#_9415bb90864644f7bca774435d7a4c35p@chr3:170626681..170626687, +
4.66e-66FFCP PHASE1:Hg19::chr20:56234717..56234758,-#_9ab4c92990319cac76fdd932f662334bp@chr20:56234717..56234758, -
4.66e-66FFCP PHASE2:Hg19::chr20:56234717..56234758,-#_9ab4c92990319cac76fdd932f662334bp@chr20:56234717..56234758, -
4.66e-66FFCP PHASE2:Hg19::chr10:114885594..114885600,+#_9ab4c92990319cac76fdd932f662334bp@chr10:114885594..114885600, +
4.66e-66FFCP PHASE1:Hg19::chr10:114885594..114885600,+#_9ab4c92990319cac76fdd932f662334bp@chr10:114885594..114885600, +
1.46e-50FFCP PHASE1:Hg19::chr17:70636802..70636818,+#_d0b5500c62efa9a828299d0ba1371f13p@chr17:70636802..70636818, +
1.46e-50FFCP PHASE2:Hg19::chr17:70636802..70636818,+#_d0b5500c62efa9a828299d0ba1371f13p@chr17:70636802..70636818, +
1.46e-50FFCP PHASE1:Hg19::chr19:51471381..51471383,-#_d0b5500c62efa9a828299d0ba1371f13p14@KLK6
1.46e-50FFCP PHASE1:Hg19::chr7:98740685..98740699,-#_d0b5500c62efa9a828299d0ba1371f13p@chr7:98740685..98740699, -
1.46e-50FFCP PHASE2:Hg19::chr19:51471381..51471383,-#_d0b5500c62efa9a828299d0ba1371f13p14@KLK6
1.46e-50FFCP PHASE2:Hg19::chr7:98740685..98740699,-#_d0b5500c62efa9a828299d0ba1371f13p@chr7:98740685..98740699, -
2.42e-50FFCP PHASE1:Hg19::chr6:128815342..128815347,-#_f64cb2a717d2f29d661d9a0c75b84bb7p@chr6:128815342..128815347, -
2.42e-50FFCP PHASE2:Hg19::chr10:5501962..5501964,+#_f64cb2a717d2f29d661d9a0c75b84bb7p@chr10:5501962..5501964, +
2.42e-50FFCP PHASE2:Hg19::chr15:42186162..42186197,-#_f64cb2a717d2f29d661d9a0c75b84bb7p1@SPTBN5
2.42e-50FFCP PHASE1:Hg19::chr15:42186162..42186197,-#_f64cb2a717d2f29d661d9a0c75b84bb7p1@SPTBN5
2.42e-50FFCP PHASE1:Hg19::chr10:5652876..5652885,-#_f64cb2a717d2f29d661d9a0c75b84bb7p5@ENST00000425246
2.42e-50FFCP PHASE1:Hg19::chr7:98870934..98870947,+#_f64cb2a717d2f29d661d9a0c75b84bb7p4@MYH16
2.42e-50FFCP PHASE1:Hg19::chr22:43343242..43343291,-#_f64cb2a717d2f29d661d9a0c75b84bb7p20@PACSIN2
2.42e-50FFCP PHASE2:Hg19::chr7:98870934..98870947,+#_f64cb2a717d2f29d661d9a0c75b84bb7p4@MYH16
2.42e-50FFCP PHASE2:Hg19::chr10:5652876..5652885,-#_f64cb2a717d2f29d661d9a0c75b84bb7p5@ENST00000425246
2.42e-50FFCP PHASE1:Hg19::chr10:5501962..5501964,+#_f64cb2a717d2f29d661d9a0c75b84bb7p@chr10:5501962..5501964, +
2.42e-50FFCP PHASE1:Hg19::chr7:98870948..98870967,+#_f64cb2a717d2f29d661d9a0c75b84bb7p3@MYH16
2.42e-50FFCP PHASE2:Hg19::chr22:43343242..43343291,-#_f64cb2a717d2f29d661d9a0c75b84bb7p20@PACSIN2
2.42e-50FFCP PHASE2:Hg19::chr7:98870948..98870967,+#_f64cb2a717d2f29d661d9a0c75b84bb7p3@MYH16
2.42e-50FFCP PHASE2:Hg19::chr6:128815342..128815347,-#_f64cb2a717d2f29d661d9a0c75b84bb7p@chr6:128815342..128815347, -
6.58e-50FFCP PHASE1:Hg19::chr1:46954560..46954569,+#_69fd6f4f61fe4373f019a481fb4fecbdp@chr1:46954560..46954569, +
6.58e-50FFCP PHASE2:Hg19::chr10:101691118..101691135,-#_69fd6f4f61fe4373f019a481fb4fecbdp6@DNMBP
6.58e-50FFCP PHASE2:Hg19::chr19:51523347..51523358,-#_69fd6f4f61fe4373f019a481fb4fecbdp11@KLK10
6.58e-50FFCP PHASE1:Hg19::chr19:51523347..51523358,-#_69fd6f4f61fe4373f019a481fb4fecbdp11@KLK10
6.58e-50FFCP PHASE1:Hg19::chr8:139755835..139755842,-#_69fd6f4f61fe4373f019a481fb4fecbdp@chr8:139755835..139755842, -
6.58e-50FFCP PHASE2:Hg19::chr8:139755835..139755842,-#_69fd6f4f61fe4373f019a481fb4fecbdp@chr8:139755835..139755842, -
6.58e-50FFCP PHASE1:Hg19::chr10:101691084..101691100,-#_69fd6f4f61fe4373f019a481fb4fecbdp8@DNMBP
6.58e-50FFCP PHASE1:Hg19::chr10:101691118..101691135,-#_69fd6f4f61fe4373f019a481fb4fecbdp6@DNMBP
6.58e-50FFCP PHASE2:Hg19::chr10:101691084..101691100,-#_69fd6f4f61fe4373f019a481fb4fecbdp8@DNMBP
6.58e-50FFCP PHASE2:Hg19::chr1:46954560..46954569,+#_69fd6f4f61fe4373f019a481fb4fecbdp@chr1:46954560..46954569, +
6.62e-41FFCP PHASE2:Hg19::chr3:139253550..139253585,+#_217779f84323076caebd212ba837a2f0p@chr3:139253550..139253585, +
6.62e-41FFCP PHASE1:Hg19::chr3:139253550..139253585,+#_217779f84323076caebd212ba837a2f0p@chr3:139253550..139253585, +
6.62e-41FFCP PHASE1:Hg19::chr3:98671855..98671858,+#_217779f84323076caebd212ba837a2f0p@chr3:98671855..98671858, +
6.62e-41FFCP PHASE2:Hg19::chr17:47091824..47091833,+#_217779f84323076caebd212ba837a2f0p@chr17:47091824..47091833, +
6.62e-41FFCP PHASE1:Hg19::chr17:47091824..47091833,+#_217779f84323076caebd212ba837a2f0p@chr17:47091824..47091833, +
6.62e-41FFCP PHASE2:Hg19::chr3:98671855..98671858,+#_217779f84323076caebd212ba837a2f0p@chr3:98671855..98671858, +
6.62e-41FFCP PHASE1:Hg19::chr7:98805698..98805708,-#_217779f84323076caebd212ba837a2f0p@chr7:98805698..98805708, -
6.62e-41FFCP PHASE2:Hg19::chr7:98805698..98805708,-#_217779f84323076caebd212ba837a2f0p@chr7:98805698..98805708, -
6.62e-41FFCP PHASE1:Hg19::chr10:30046722..30046725,-#_217779f84323076caebd212ba837a2f0p@chr10:30046722..30046725, -
6.62e-41FFCP PHASE1:Hg19::chr10:5652892..5652903,-#_217779f84323076caebd212ba837a2f0p2@ENST00000425246
6.62e-41FFCP PHASE2:Hg19::chr2:30440814..30440823,+#_217779f84323076caebd212ba837a2f0p@chr2:30440814..30440823, +
6.62e-41FFCP PHASE1:Hg19::chr2:30440814..30440823,+#_217779f84323076caebd212ba837a2f0p@chr2:30440814..30440823, +
6.62e-41FFCP PHASE2:Hg19::chr10:30046722..30046725,-#_217779f84323076caebd212ba837a2f0p@chr10:30046722..30046725, -
6.62e-41FFCP PHASE2:Hg19::chr9:132337391..132337396,+#_217779f84323076caebd212ba837a2f0p2@ENST00000443993, p2@uc004bya.1
6.62e-41FFCP PHASE2:Hg19::chr10:5652892..5652903,-#_217779f84323076caebd212ba837a2f0p2@ENST00000425246
6.62e-41FFCP PHASE1:Hg19::chr9:132337391..132337396,+#_217779f84323076caebd212ba837a2f0p2@ENST00000443993, p2@uc004bya.1
9.91e-41FFCP PHASE1:Hg19::chr8:143317560..143317581,-#_4eaa029509bec0dfe376e5fd9e2eb476p@chr8:143317560..143317581, -
9.91e-41FFCP PHASE2:Hg19::chr8:143317560..143317581,-#_4eaa029509bec0dfe376e5fd9e2eb476p@chr8:143317560..143317581, -

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