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Name:organ segment
Definition:"Organ region with one or more fixed or anchored fiat boundaries. Examples: artery, trunk of nerve, cervical part of esophagus, pelvic part of vagina, horn of thyroid cartilage, anterior segment of eyeball[FMA]." [FMA:86140]
Synonyms: "organ region with fixed fiat boundary" EXACT [FMA:86140]
"segment of organ" EXACT [FMA:86140]

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data


is_a:UBERON:0000064(organ part)


is a:UBERON:0000072 (segment of respiratory tract),UBERON:0001801 (anterior segment of eyeball),UBERON:0001802 (posterior segment of eyeball),UBERON:0003688 (omentum),UBERON:0004529 (anatomical projection),UBERON:0004732 (segmental subdivision of nervous system),UBERON:0004914 (duodenal papilla),UBERON:0005800 (segment of aorta)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology

Human (Homo sapiens)

... further results Mouse (Mus musculus)

... further results

Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0000063 (organ segment), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

No analysis results