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{{UBERON
{{UBERON
|id=UBERON:0005933
|name=hair root sheath
|namespace=
|def=
|xref=EMAPA:18772;;MA:0000162;;MA:0000784
|is_a=UBERON:0000061;;UBERON:0004121
|synonym=
|comment=see https://sourceforge.net/tracker/?func=detail&aid=3213510&group_id=76834&atid=1205376
|alt_id=
|alt_id=
|disjoint_from=
|comment=see https://sourceforge.net/tracker/?func
|union_of=
|created_by=
|created_by=
|obo_creation_date=
|def=
|subset=
|adjacent_to=
|derives_from=
|derives_from=
|develops_from=
|develops_from=
|disjoint_from=
|has_quality=
|has_quality=
|id=UBERON:0005933
|is_a=UBERON:0000479 ;;UBERON:0004121 ;;UBERON:0010314
|is_obsolete=
|located_in=
|located_in=
|name=hair root sheath
|namespace=FANTOM
|obo_creation_date=
|part_of=UBERON:0005932
|part_of=UBERON:0005932
|preceded_by=
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|subset=
|synonym=
|union_of=
|xref=EMAPA:18772;;MA:0000162;;MA:0000784
}}
}}

Latest revision as of 17:55, 12 September 2014

Name:hair root sheath
Namespace:FANTOM
Xrefs:
links:

EMAPA:18772
MA:0000162

MA:0000784
Comments:see https://sourceforge.net/tracker/?func

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:UBERON:0000479(tissue),UBERON:0004121(ectoderm-derived structure),UBERON:0010314(structure with developmental contribution from neural crest)
part_of:UBERON:0005932(bulb of hair follicle)



Children

is a:UBERON:0005941 (hair inner root sheath),UBERON:0005942 (hair outer root sheath)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology

Human (Homo sapiens)


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0005933 (hair root sheath), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
4.22e-98FFCP PHASE2:Hg19::chr3:4723000..4723006,+#_0cccdacbf873f49e5d6a1c1d0b7a4329p@chr3:4723000..4723006, +
4.22e-98FFCP PHASE1:Hg19::chr3:4723000..4723006,+#_0cccdacbf873f49e5d6a1c1d0b7a4329p@chr3:4723000..4723006, +
2.34e-79FFCP PHASE1:Hg19::chr1:8950583..8950588,+#_b54d613ec10da2aa3af22df8612230eap@chr1:8950583..8950588, +
2.34e-79FFCP PHASE2:Hg19::chr1:8950583..8950588,+#_b54d613ec10da2aa3af22df8612230eap@chr1:8950583..8950588, +
1.4e-49FFCP PHASE2:Hg19::chr1:78958342..78958353,+#_240ffb7d8313a92a815e92b6e5264772p3@PTGFR
1.4e-49FFCP PHASE1:Hg19::chr1:78958342..78958353,+#_240ffb7d8313a92a815e92b6e5264772p3@PTGFR
4.89e-41FFCP PHASE1:Hg19::chr13:36432199..36432209,+#_601ead1f7eb4ff2c0166f021ead7abe1p1@uc001uvi.1
4.89e-41FFCP PHASE2:Hg19::chr13:36432199..36432209,+#_601ead1f7eb4ff2c0166f021ead7abe1p1@uc001uvi.1
3.61e-34FFCP PHASE2:Hg19::chr9:97765380..97765385,-#_92228b08ecfabb1edec3580f0772ce87p@chr9:97765380..97765385, -
3.61e-34FFCP PHASE1:Hg19::chr9:97765380..97765385,-#_92228b08ecfabb1edec3580f0772ce87p@chr9:97765380..97765385, -
4.29e-34FFCP PHASE2:Hg19::chr7:142563953..142563963,+#_e1bddfa9c10b7b685dde803542cdc928p@chr7:142563953..142563963, +
4.29e-34FFCP PHASE1:Hg19::chr7:142563953..142563963,+#_e1bddfa9c10b7b685dde803542cdc928p@chr7:142563953..142563963, +
8.57e-32FFCP PHASE1:Hg19::chr3:154899522..154899536,+#_dc0649352ade1e0446e2902dcf10d0a7p@chr3:154899522..154899536, +
8.57e-32FFCP PHASE2:Hg19::chr3:154899522..154899536,+#_dc0649352ade1e0446e2902dcf10d0a7p@chr3:154899522..154899536, +
1.0e-31FFCP PHASE2:Hg19::chr4:120192715..120192730,+#_ce3be8d3e1dea4035eb76d86c3735bc8p@chr4:120192715..120192730, +
1.0e-31FFCP PHASE1:Hg19::chr4:120192715..120192730,+#_ce3be8d3e1dea4035eb76d86c3735bc8p@chr4:120192715..120192730, +
2.22e-29FFCP PHASE1:Hg19::chr3:154741907..154741918,+#_4f0a95a29653f83d767078263692d29cp25@MME
2.22e-29FFCP PHASE2:Hg19::chr3:154741907..154741918,+#_4f0a95a29653f83d767078263692d29cp25@MME
8.13e-28FFCP PHASE2:Hg19::chr11:121896688..121896697,-#_836e6b14a75724c83cbfa0436971794bp@chr11:121896688..121896697, -
8.13e-28FFCP PHASE1:Hg19::chr11:121896688..121896697,-#_836e6b14a75724c83cbfa0436971794bp@chr11:121896688..121896697, -
5.56e-26FFCP PHASE1:Hg19::chr14:92344000..92344007,-#_5ed1279cfff5c18977c3db127eead6c4p@chr14:92344000..92344007, -
5.56e-26FFCP PHASE2:Hg19::chr14:92344000..92344007,-#_5ed1279cfff5c18977c3db127eead6c4p@chr14:92344000..92344007, -
5.96e-26FFCP PHASE1:Hg19::chr19:9811125..9811144,-#_3feabee8cf3fbb5461f96cd8b4842167p2@ZNF812
5.96e-26FFCP PHASE2:Hg19::chr19:9811125..9811144,-#_3feabee8cf3fbb5461f96cd8b4842167p2@ZNF812
9.18e-26FFCP PHASE2:Hg19::chr8:123102017..123102025,-#_bc2aaa6d1356dfd9656674ecc3c42aa0p@chr8:123102017..123102025, -
9.18e-26FFCP PHASE1:Hg19::chr8:123102017..123102025,-#_bc2aaa6d1356dfd9656674ecc3c42aa0p@chr8:123102017..123102025, -
9.02e-25FFCP PHASE2:Hg19::chr5:65105892..65105924,+#_34a8976d299002fb8e98c1bc682440d2p@chr5:65105892..65105924, +
9.02e-25FFCP PHASE1:Hg19::chr5:65105892..65105924,+#_34a8976d299002fb8e98c1bc682440d2p@chr5:65105892..65105924, +
2.64e-24FFCP PHASE2:Hg19::chr11:86520665..86520684,+#_39590f9713d061e61f3792e0140b257bp@chr11:86520665..86520684, +
2.64e-24FFCP PHASE1:Hg19::chr11:86520665..86520684,+#_39590f9713d061e61f3792e0140b257bp@chr11:86520665..86520684, +
1.78e-23FFCP PHASE2:Hg19::chr2:38418282..38418295,+#_aee9f151b492dc7eeefd5c3944ddb13dp@chr2:38418282..38418295, +
1.78e-23FFCP PHASE1:Hg19::chr2:38418282..38418295,+#_aee9f151b492dc7eeefd5c3944ddb13dp@chr2:38418282..38418295, +
1.99e-23FFCP PHASE1:Hg19::chr3:112359271..112359279,+#_5b7900eba0f3372166f8c00f7a0bb81bp@chr3:112359271..112359279, +
1.99e-23FFCP PHASE2:Hg19::chr3:157160884..157160892,-#_5b7900eba0f3372166f8c00f7a0bb81bp@chr3:157160884..157160892, -
1.99e-23FFCP PHASE1:Hg19::chr3:157160884..157160892,-#_5b7900eba0f3372166f8c00f7a0bb81bp@chr3:157160884..157160892, -
1.99e-23FFCP PHASE2:Hg19::chr3:112359271..112359279,+#_5b7900eba0f3372166f8c00f7a0bb81bp@chr3:112359271..112359279, +
3.12e-23FFCP PHASE1:Hg19::chr6:139694564..139694581,-#_02f92b7cc299a748a27ccdf897989828p13@CITED2
3.12e-23FFCP PHASE2:Hg19::chr6:139694564..139694581,-#_02f92b7cc299a748a27ccdf897989828p13@CITED2
8.7e-23FFCP PHASE1:Hg19::chr4:47857451..47857469,-#_af48626ff605cde2812d27a3a8e057e0p@chr4:47857451..47857469, -
8.7e-23FFCP PHASE2:Hg19::chr4:47857451..47857469,-#_af48626ff605cde2812d27a3a8e057e0p@chr4:47857451..47857469, -
2.85e-22FFCP PHASE1:Hg19::chr3:154899435..154899447,+#_2da8d804090886ac22e8e42ba606f9f6p@chr3:154899435..154899447, +
2.85e-22FFCP PHASE2:Hg19::chr3:154899435..154899447,+#_2da8d804090886ac22e8e42ba606f9f6p@chr3:154899435..154899447, +
3.93e-22FFCP PHASE2:Hg19::chr19:6071270..6071281,+#_e272840b9f085de3d1f227b97889cf3dp@chr19:6071270..6071281, +
3.93e-22FFCP PHASE1:Hg19::chr19:6071270..6071281,+#_e272840b9f085de3d1f227b97889cf3dp@chr19:6071270..6071281, +
3.47e-21FFCP PHASE1:Hg19::chr11:1123043..1123046,-#_5206def2c87c1ce2280f920ba492bd3ep@chr11:1123043..1123046, -
3.47e-21FFCP PHASE2:Hg19::chr11:1123043..1123046,-#_5206def2c87c1ce2280f920ba492bd3ep@chr11:1123043..1123046, -
3.81e-21FFCP PHASE1:Hg19::chr7:142563227..142563251,+#_c8eed27a151d51b3a429de22cb769060p@chr7:142563227..142563251, +
3.81e-21FFCP PHASE2:Hg19::chr7:142563227..142563251,+#_c8eed27a151d51b3a429de22cb769060p@chr7:142563227..142563251, +
4.66e-21FFCP PHASE1:Hg19::chr8:108509895..108509902,-#_17912aea131237db1058cbae089758f9p16@ANGPT1
4.66e-21FFCP PHASE2:Hg19::chr9:132337391..132337396,+#_17912aea131237db1058cbae089758f9p2@ENST00000443993, p2@uc004bya.1
4.66e-21FFCP PHASE1:Hg19::chr9:132337391..132337396,+#_17912aea131237db1058cbae089758f9p2@ENST00000443993, p2@uc004bya.1
4.66e-21FFCP PHASE2:Hg19::chr21:17943379..17943385,+#_17912aea131237db1058cbae089758f9p@chr21:17943379..17943385, +
4.66e-21FFCP PHASE1:Hg19::chr15:81611431..81611434,-#_17912aea131237db1058cbae089758f9p@chr15:81611431..81611434, -
4.66e-21FFCP PHASE2:Hg19::chr8:108509895..108509902,-#_17912aea131237db1058cbae089758f9p16@ANGPT1
4.66e-21FFCP PHASE2:Hg19::chr15:81611431..81611434,-#_17912aea131237db1058cbae089758f9p@chr15:81611431..81611434, -
4.66e-21FFCP PHASE1:Hg19::chr21:17943379..17943385,+#_17912aea131237db1058cbae089758f9p@chr21:17943379..17943385, +
6.96e-21FFCP PHASE1:Hg19::chr19:43702360..43702371,-#_166ce11f8f17ca2728ef29f7496b9857p8@PSG4
6.96e-21FFCP PHASE2:Hg19::chr19:43702360..43702371,-#_166ce11f8f17ca2728ef29f7496b9857p8@PSG4
7.7e-21FFCP PHASE2:Hg19::chr1:77997785..77997808,+#_20ed36d55aa0f74bac9117d4f77bea1ep12@AK5
7.7e-21FFCP PHASE1:Hg19::chr2:96012757..96012779,+#_20ed36d55aa0f74bac9117d4f77bea1ep8@KCNIP3
7.7e-21FFCP PHASE1:Hg19::chr1:77997785..77997808,+#_20ed36d55aa0f74bac9117d4f77bea1ep12@AK5
7.7e-21FFCP PHASE2:Hg19::chr2:96012757..96012779,+#_20ed36d55aa0f74bac9117d4f77bea1ep8@KCNIP3
5.4e-20FFCP PHASE2:Hg19::chr1:65888177..65888194,+#_f1c92db578156bbf011874e060b21039p@chr1:65888177..65888194, +
5.4e-20FFCP PHASE1:Hg19::chr1:65888177..65888194,+#_f1c92db578156bbf011874e060b21039p@chr1:65888177..65888194, +
9.38e-20FFCP PHASE2:Hg19::chr5:75912926..75912939,-#_d304192e45ec031c18794142c7ff5adbp@chr5:75912926..75912939, -
9.38e-20FFCP PHASE1:Hg19::chr5:75912926..75912939,-#_d304192e45ec031c18794142c7ff5adbp@chr5:75912926..75912939, -
6.43e-19FFCP PHASE2:Hg19::chr19:6076930..6076937,+#_5d6b05bfab5e0ee27074413cf06fc005p@chr19:6076930..6076937, +
6.43e-19FFCP PHASE1:Hg19::chr19:6076930..6076937,+#_5d6b05bfab5e0ee27074413cf06fc005p@chr19:6076930..6076937, +
2.04e-18FFCP PHASE1:Hg19::chr16:89687120..89687166,+#_00f330da7969adae78d5abcbac3b4809p3@DPEP1
2.04e-18FFCP PHASE2:Hg19::chr16:89687120..89687166,+#_00f330da7969adae78d5abcbac3b4809p3@DPEP1
2.22e-18FFCP PHASE1:Hg19::chr9:118358945..118358954,+#_552b75d53bb31314a5b59a29d8b35f75p@chr9:118358945..118358954, +
2.22e-18FFCP PHASE2:Hg19::chr9:118358945..118358954,+#_552b75d53bb31314a5b59a29d8b35f75p@chr9:118358945..118358954, +
2.43e-18FFCP PHASE1:Hg19::chr5:39376845..39376861,-#_70c8854c752dab822c7f0b608a85ac9fp@chr5:39376845..39376861, -
2.43e-18FFCP PHASE2:Hg19::chr5:39376845..39376861,-#_70c8854c752dab822c7f0b608a85ac9fp@chr5:39376845..39376861, -
2.9e-18FFCP PHASE1:Hg19::chr2:119605374..119605377,-#_bf7360129c114650b8d9d6967cdc7e37p7@EN1
2.9e-18FFCP PHASE2:Hg19::chr2:119605374..119605377,-#_bf7360129c114650b8d9d6967cdc7e37p7@EN1
5.48e-18FFCP PHASE1:Hg19::chr2:230786015..230786026,-#_a098825067d622e8a2cf479c4f818b4ap23@TRIP12
5.48e-18FFCP PHASE2:Hg19::chr2:230786015..230786026,-#_a098825067d622e8a2cf479c4f818b4ap23@TRIP12
5.75e-18FFCP PHASE2:Hg19::chr4:24801803..24801832,+#_ce29604a77267d96529804f2d616e45cp@chr4:24801803..24801832, +
5.75e-18FFCP PHASE1:Hg19::chr4:24801803..24801832,+#_ce29604a77267d96529804f2d616e45cp@chr4:24801803..24801832, +
6.48e-18FFCP PHASE1:Hg19::chr12:58934549..58934562,+#_075ee5dbf591496384c9ed45fc137cccp@chr12:58934549..58934562, +
6.48e-18FFCP PHASE2:Hg19::chr12:58934549..58934562,+#_075ee5dbf591496384c9ed45fc137cccp@chr12:58934549..58934562, +
9.07e-18FFCP PHASE1:Hg19::chr9:113799720..113799726,-#_d5a52f17f38ad81ef0ff5af85ef049a8p@chr9:113799720..113799726, -
9.07e-18FFCP PHASE1:Hg19::chr1:85987417..85987423,-#_d5a52f17f38ad81ef0ff5af85ef049a8p44@DDAH1
9.07e-18FFCP PHASE2:Hg19::chr9:113799720..113799726,-#_d5a52f17f38ad81ef0ff5af85ef049a8p@chr9:113799720..113799726, -
9.07e-18FFCP PHASE2:Hg19::chr1:85987417..85987423,-#_d5a52f17f38ad81ef0ff5af85ef049a8p44@DDAH1
9.58e-18FFCP PHASE2:Hg19::chr5:149497202..149497221,+#_8baa8a4afc2ab69546d5d6f00c59b6e6p@chr5:149497202..149497221, +
9.58e-18FFCP PHASE1:Hg19::chr5:149497202..149497221,+#_8baa8a4afc2ab69546d5d6f00c59b6e6p@chr5:149497202..149497221, +
1.07e-17FFCP PHASE2:Hg19::chr4:47839519..47839528,-#_0dfd6c1ce9f886231f499cf5e065ac2cp4@CORIN
1.07e-17FFCP PHASE1:Hg19::chr5:172222753..172222757,+#_0dfd6c1ce9f886231f499cf5e065ac2cp@chr5:172222753..172222757, +
1.07e-17FFCP PHASE1:Hg19::chr4:47839519..47839528,-#_0dfd6c1ce9f886231f499cf5e065ac2cp4@CORIN
1.07e-17FFCP PHASE2:Hg19::chr5:172222753..172222757,+#_0dfd6c1ce9f886231f499cf5e065ac2cp@chr5:172222753..172222757, +
1.27e-17FFCP PHASE2:Hg19::chr12:56224522..56224535,-#_0e7f369f6a47c5ea878bae4171717fdep7@DNAJC14
1.27e-17FFCP PHASE1:Hg19::chr12:56224522..56224535,-#_0e7f369f6a47c5ea878bae4171717fdep7@DNAJC14
1.27e-17FFCP PHASE2:Hg19::chr4:178083004..178083050,-#_0e7f369f6a47c5ea878bae4171717fdep@chr4:178083004..178083050, -
1.27e-17FFCP PHASE1:Hg19::chr4:178083004..178083050,-#_0e7f369f6a47c5ea878bae4171717fdep@chr4:178083004..178083050, -
1.37e-17FFCP PHASE2:Hg19::chr22:45958896..45958922,+#_9d244774d2d00cb0f5982b88cb672f3cp@chr22:45958896..45958922, +
1.37e-17FFCP PHASE1:Hg19::chr22:45958896..45958922,+#_9d244774d2d00cb0f5982b88cb672f3cp@chr22:45958896..45958922, +
1.49e-17FFCP PHASE2:Hg19::chr3:57583650..57583654,+#_643de95cdd2507c148d6298a57a86485p@chr3:57583650..57583654, +
1.49e-17FFCP PHASE1:Hg19::chr3:57583650..57583654,+#_643de95cdd2507c148d6298a57a86485p@chr3:57583650..57583654, +

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