FFCP PHASE1:Hg19::chr10:123845246..123845261,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr10:123845246..123845261,+ to FFCP PHASE1:Hg19::chr10:123845246..123845261,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr10:123845246..123845261,+ | |||
|coexpression_cluster_id=C1302 | |||
|description=CAGE_peak_at_chr10:123845246..123845261,+ | |||
|id=chr10:123845246..123845261,+ | |||
|ontology_enrichment_celltype=CL:0002076!3.40e-36!43;CL:0000223!1.35e-26!59;CL:0002251!1.40e-24!21;CL:0000066!1.67e-18!254;CL:0002159!5.03e-17!13;CL:0000622!1.37e-15!5;CL:0002368!2.77e-13!13;CL:0000154!6.40e-13!6;CL:0000244!2.69e-12!4;CL:0000731!2.69e-12!4;CL:0000076!5.48e-11!62;CL:0002623!4.03e-10!3;CL:0000362!2.35e-09!8;CL:0002621!2.63e-09!3;CL:0002077!1.53e-08!33;CL:0000150!1.83e-08!9;CL:0000240!2.28e-08!6;CL:0000311!2.28e-08!6;CL:0000079!2.28e-08!6;CL:0000237!2.28e-08!6;CL:0000036!2.28e-08!6;CL:0000357!2.28e-08!6;CL:0000114!2.28e-08!6;CL:0000317!3.71e-07!2;CL:1000448!3.71e-07!2;CL:0002308!3.71e-07!2;CL:0002140!3.71e-07!2;CL:0000575!7.31e-07!2;CL:0000220!9.39e-07!246 | |||
|ontology_enrichment_celltype_v019=CL:0000622;2.76e-29;5!CL:0000154;1.83e-24;6!CL:0002251;1.25e-21;20!CL:0000317;7.82e-19;2!CL:1000448;7.82e-19;2!CL:0002308;7.82e-19;2!CL:0002140;7.82e-19;2!CL:0000150;2.08e-16;9!CL:0000362;2.93e-16;9!CL:0002159;5.84e-16;14!CL:0000240;3.68e-14;6!CL:0000311;3.68e-14;6!CL:0000079;3.68e-14;6!CL:0000237;3.68e-14;6!CL:0002623;2.47e-13;3!CL:0002076;4.30e-11;42!CL:0002336;2.74e-10;1!CL:0002261;2.74e-10;1!CL:0002252;2.74e-10;1!CL:0002170;2.74e-10;1!CL:0000244;6.83e-10;4!CL:0000731;6.83e-10;4!CL:0000076;5.28e-09;63!CL:0000312;3.21e-08;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000622,5.73e-29,5;CL:0000154,3.36e-24,6;CL:0002251,1.19e-21,20;CL:0000317,1.62e-18,2;CL:1000448,1.62e-18,2;CL:0002308,1.62e-18,2;CL:0002140,1.62e-18,2;CL:0000150,3.11e-16,9;CL:0000362,5.01e-16,9;CL:0002159,8.96e-16,14;CL:0000076,1.48e-15,63;CL:0000240,4.12e-14,6;CL:0000311,4.12e-14,6;CL:0000079,4.12e-14,6;CL:0000237,4.12e-14,6;CL:0000036,4.12e-14,6;CL:0000357,4.12e-14,6;CL:0000114,4.12e-14,6;CL:0002623,2.79e-13,3;CL:0002076,6.45e-13,42;CL:0002336,2.08e-10,1;CL:0002261,2.08e-10,1;CL:0002170,2.08e-10,1;CL:0002252,3.29e-10,1;CL:0000244,5.21e-10,4;CL:0000731,5.21e-10,4;CL:0000066,6.81e-10,253;CL:0000223,4.47e-09,58;CL:0000312,3.92e-08,5 | |||
|ontology_enrichment_development_v019=CL:0000357;3.68e-14;6!CL:0000114;3.68e-14;6 | |||
|ontology_enrichment_disease=DOID:1749!2.33e-19!14 | |||
|ontology_enrichment_disease_v019=DOID:1749;2.72e-16;14!DOID:3151;7.40e-11;1!DOID:3149;7.40e-11;1 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,3.14e-16,14;DOID:3151,7.40e-11,1;DOID:3149,7.40e-11,1 | |||
|ontology_enrichment_uberon=UBERON:0000166!1.12e-20!21;UBERON:0000161!1.58e-19!35;UBERON:0000165!2.53e-17!28;UBERON:0000930!2.53e-17!28;UBERON:0001004!4.01e-15!72;UBERON:0003729!4.18e-15!5;UBERON:0000365!2.09e-14!5;UBERON:0003102!6.33e-14!95;UBERON:0004119!2.08e-13!169;UBERON:0000925!2.08e-13!169;UBERON:0006595!2.08e-13!169;UBERON:0003343!2.77e-12!4;UBERON:0004785!2.77e-12!4;UBERON:0005910!6.03e-12!6;UBERON:0001444!1.05e-11!48;UBERON:0000344!6.39e-11!12;UBERON:0001949!2.63e-09!3;UBERON:0001723!6.85e-09!3;UBERON:0001033!6.85e-09!3;UBERON:0010056!6.85e-09!3;UBERON:0006562!2.40e-08!11;UBERON:0001007!8.03e-08!155;UBERON:0001555!8.03e-08!155;UBERON:0007026!8.03e-08!155;UBERON:0002419!3.71e-07!2;UBERON:0007771!3.71e-07!2;UBERON:0003297!3.71e-07!2;UBERON:0001821!3.71e-07!2;UBERON:0003487!3.71e-07!2;UBERON:0001820!3.71e-07!2;UBERON:0005089!3.71e-07!2;UBERON:0005088!3.71e-07!2;UBERON:0000065!3.79e-07!53;UBERON:0000974!5.35e-07!10;UBERON:0000078!5.98e-07!18 | |||
|ontology_enrichment_uberon_v019=UBERON:0002419;7.82e-19;2!UBERON:0007771;7.82e-19;2!UBERON:0003297;7.82e-19;2!UBERON:0001821;7.82e-19;2!UBERON:0003487;7.82e-19;2!UBERON:0001820;7.82e-19;2!UBERON:0000161;5.01e-12;19!UBERON:0000166;5.01e-12;19!UBERON:0003729;1.81e-11;13!UBERON:0000165;2.30e-11;28!UBERON:0003343;2.68e-10;4!UBERON:0004785;2.68e-10;4!UBERON:0000997;2.74e-10;1!UBERON:0005056;2.74e-10;1!UBERON:0004176;2.74e-10;1!UBERON:0001003;7.66e-10;15!UBERON:0007376;7.66e-10;15!UBERON:0000365;4.37e-08;5!UBERON:0000344;1.65e-07;20!UBERON:0000486;2.94e-07;12!UBERON:0002365;3.45e-07;31!UBERON:0002330;3.45e-07;31!UBERON:0000974;3.82e-07;6!UBERON:0010371;3.88e-07;31!UBERON:0001044;4.25e-07;6!UBERON:0003293;4.25e-07;6!UBERON:0003294;4.25e-07;6!UBERON:0010047;4.25e-07;6!UBERON:0003408;4.25e-07;6!UBERON:0000167;4.25e-07;6!UBERON:0005910;7.08e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002419,1.62e-18,2;UBERON:0007771,1.62e-18,2;UBERON:0003297,1.62e-18,2;UBERON:0001821,1.62e-18,2;UBERON:0003487,1.62e-18,2;UBERON:0001820,1.62e-18,2;UBERON:0005089,1.62e-18,2;UBERON:0005088,1.62e-18,2;UBERON:0003729,1.55e-11,13;UBERON:0003102,3.02e-11,99;UBERON:0000165,5.51e-11,29;UBERON:0000930,5.51e-11,29;UBERON:0000166,2.27e-10,22;UBERON:0003343,2.51e-10,4;UBERON:0004785,2.51e-10,4;UBERON:0000997,3.96e-10,1;UBERON:0005056,3.96e-10,1;UBERON:0001003,1.05e-09,15;UBERON:0007376,1.05e-09,15;UBERON:0007383,1.05e-09,15;UBERON:0001444,2.01e-08,49;UBERON:0000365,3.52e-08,5;UBERON:0000344,1.50e-07,20;UBERON:0000033,2.81e-07,56;UBERON:0002365,3.68e-07,31;UBERON:0002330,3.68e-07,31;UBERON:0001044,4.52e-07,6;UBERON:0003293,4.52e-07,6;UBERON:0003294,4.52e-07,6;UBERON:0010047,4.52e-07,6;UBERON:0000167,4.52e-07,6;UBERON:0005910,5.93e-07,6 | |||
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| ||
|short_description=p@chr10:123845246..123845261,+ | |||
}} | }} |
Latest revision as of 11:09, 23 July 2015
Short description: | p@chr10:123845246..123845261, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:123845246..123845261, + |
Coexpression cluster: | C1302_keratoacanthoma_cervical_immature_salivary_malignant_oral_Keratinocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin gland | 1.62e-18 | 2 |
epidermis gland | 1.62e-18 | 2 |
gland of integumental system | 1.62e-18 | 2 |
sebaceous gland | 1.62e-18 | 2 |
skin sebaceous gland | 1.62e-18 | 2 |
sweat gland | 1.62e-18 | 2 |
sweat gland placode | 1.62e-18 | 2 |
sebaceous gland placode | 1.62e-18 | 2 |
mouth mucosa | 1.55e-11 | 13 |
surface structure | 3.02e-11 | 99 |
mouth | 5.51e-11 | 29 |
stomodeum | 5.51e-11 | 29 |
oral opening | 2.27e-10 | 22 |
mucosa of oral region | 2.51e-10 | 4 |
respiratory system mucosa | 2.51e-10 | 4 |
mammalian vulva | 3.96e-10 | 1 |
external female genitalia | 3.96e-10 | 1 |
skin epidermis | 1.05e-09 | 15 |
outer epithelium | 1.05e-09 | 15 |
enveloping layer of ectoderm | 1.05e-09 | 15 |
subdivision of head | 2.01e-08 | 49 |
urothelium | 3.52e-08 | 5 |
mucosa | 1.50e-07 | 20 |
head | 2.81e-07 | 56 |
exocrine gland | 3.68e-07 | 31 |
exocrine system | 3.68e-07 | 31 |
saliva-secreting gland | 4.52e-07 | 6 |
gland of oral region | 4.52e-07 | 6 |
gland of foregut | 4.52e-07 | 6 |
oral gland | 4.52e-07 | 6 |
oral cavity | 4.52e-07 | 6 |
transitional epithelium | 5.93e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 3.14e-16 | 14 |
skin squamous cell carcinoma | 7.40e-11 | 1 |
keratoacanthoma | 7.40e-11 | 1 |