FFCP PHASE1:Hg19::chr12:125399493..125399504,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr12:125399493..125399504,- to FFCP PHASE1:Hg19::chr12:125399493..125399504,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=7316 | |EntrezGene=7316 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12468 | |HGNC=12468 | ||
|TSSclassifier=strong | |||
|UniProt=F5H041 | |UniProt=F5H041 | ||
|association_with_transcript=-15bp_to_ENST00000541046_5end | |||
|cluster_id=chr12:125399493..125399504,- | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_17_at_UBC_5end | |||
|id=chr12:125399493..125399504,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002363;2.74e-12;2!CL:0002593;2.74e-12;2!CL:0000746;9.66e-09;3!CL:0000737;7.27e-07;4!CL:0000244;8.85e-07;4!CL:0000731;8.85e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002593,3.24e-12,2;CL:0002363,3.62e-12,2;CL:0000008,3.62e-12,2;CL:0000746,9.66e-09,3;CL:0000513,9.66e-09,3;CL:0000737,7.27e-07,4;CL:0000244,7.70e-07,4;CL:0000731,7.70e-07,4 | |||
|ontology_enrichment_development_v019=CL:0000008;2.74e-12;2!UBERON:0009117;6.20e-10;10!UBERON:0005564;6.20e-10;10!CL:0000513;9.66e-09;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0003566;2.74e-12;2!UBERON:0001777;2.74e-12;2!UBERON:0002456;2.74e-12;2!UBERON:0000473;3.54e-12;8!UBERON:0003135;4.08e-09;11!UBERON:0003891;8.85e-07;4!UBERON:0000964;8.85e-07;4!UBERON:0010409;8.85e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002456,3.24e-12,2;UBERON:0000473,3.54e-12,8;UBERON:0003566,3.62e-12,2;UBERON:0001777,3.62e-12,2;UBERON:0003135,4.08e-09,11 | |||
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| ||
|short_description=p17@UBC | |||
}} | }} |
Latest revision as of 04:53, 17 September 2015
Short description: | p17@UBC |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_17_at_UBC_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | -15bp_to_ENST00000541046_5end |
EntrezGene: | UBC |
HGNC: | 12468 |
UniProt: | F5H041 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the internal thoracic artery | 3.24e-12 | 2 |
keratocyte | 3.62e-12 | 2 |
migratory cranial neural crest cell | 3.62e-12 | 2 |
cardiac muscle cell | 9.66e-09 | 3 |
cardiac muscle myoblast | 9.66e-09 | 3 |
striated muscle cell | 7.27e-07 | 4 |
transitional epithelial cell | 7.70e-07 | 4 |
urothelial cell | 7.70e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
internal thoracic artery | 3.24e-12 | 2 |
testis | 3.54e-12 | 8 |
head connective tissue | 3.62e-12 | 2 |
substantia propria of cornea | 3.62e-12 | 2 |
male reproductive organ | 4.08e-09 | 11 |