FFCP PHASE1:Hg19::chr12:56347504..56347517,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr12:56347504..56347517,+ to FFCP PHASE1:Hg19::chr12:56347504..56347517,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr12:56347504..56347517,+ | |||
|description=CAGE_peak_at_chr12:56347504..56347517,+ | |||
|id=chr12:56347504..56347517,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000622;2.29e-09;5!CL:0002623;5.34e-09;3!CL:0000154;8.47e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000622,1.50e-09,5;CL:0002623,3.58e-09,3;CL:0000154,5.99e-08,6;CL:0000244,6.28e-07,4;CL:0000731,6.28e-07,4 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0001044;1.56e-07;6!UBERON:0003293;1.56e-07;6!UBERON:0003294;1.56e-07;6!UBERON:0010047;1.56e-07;6!UBERON:0003408;1.56e-07;6!UBERON:0000167;1.56e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003408,1.17e-09,10;UBERON:0001044,1.60e-07,6;UBERON:0003293,1.60e-07,6;UBERON:0003294,1.60e-07,6;UBERON:0010047,1.60e-07,6;UBERON:0000167,1.60e-07,6 | |||
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| 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| ||
|short_description=p@chr12:56347504..56347517,+ | |||
}} | }} |
Latest revision as of 10:15, 24 July 2015
Short description: | p@chr12:56347504..56347517, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:56347504..56347517, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
acinar cell | 1.50e-09 | 5 |
acinar cell of salivary gland | 3.58e-09 | 3 |
protein secreting cell | 5.99e-08 | 6 |
transitional epithelial cell | 6.28e-07 | 4 |
urothelial cell | 6.28e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
gland of gut | 1.17e-09 | 10 |
saliva-secreting gland | 1.60e-07 | 6 |
gland of oral region | 1.60e-07 | 6 |
gland of foregut | 1.60e-07 | 6 |
oral gland | 1.60e-07 | 6 |
oral cavity | 1.60e-07 | 6 |