FFCP PHASE1:Hg19::chr14:106573756..106573760,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=100291917,100293211 | |EntrezGene=100291917,100293211 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=5580 | |HGNC=5580 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=39bp_to_ENST00000390601_5end | |||
|cluster_id=chr14:106573756..106573760,- | |||
|coexpression_cluster_id=C282 | |||
|description=CAGE_peak_1_at_IGHV3-11_5end | |||
|id=chr14:106573756..106573760,- | |||
|ontology_enrichment_celltype=CL:0000236!3.71e-11!14 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006298;1.78e-15;1!UBERON:0008801;1.78e-15;1!UBERON:0004872;3.88e-09;7!UBERON:0006965;2.15e-08;2!UBERON:0006595;1.98e-07;86 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:12603;5.55e-16;1 | |||
|ontology_enrichment_disease_v019_2=DOID:12603,5.56e-16,1 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.31e-34!115;UBERON:0001829!2.79e-10!2;UBERON:0000178!4.55e-07!15;UBERON:0000179!4.55e-07!15;UBERON:0000463!4.55e-07!15;UBERON:0002106!5.33e-07!3;UBERON:0004854!5.33e-07!3;UBERON:0009034!5.33e-07!3;UBERON:0002095!5.33e-07!3;UBERON:0004782!5.33e-07!3;UBERON:0003281!5.33e-07!3;UBERON:0009664!5.33e-07!3;UBERON:0002296!5.33e-07!3;UBERON:0005602!5.33e-07!3;UBERON:0001179!5.33e-07!3;UBERON:0006293!5.33e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0001829;3.93e-29;2!UBERON:0002372;6.43e-16;1!UBERON:0001961;6.43e-16;1!UBERON:0001744;6.43e-16;1!UBERON:0001042;6.43e-16;1!UBERON:0001735;6.43e-16;1!UBERON:0000029;1.78e-15;1!UBERON:0001831;1.78e-15;1!UBERON:0001736;1.78e-15;1!UBERON:0001567;1.78e-15;1!UBERON:0001044;2.19e-10;6!UBERON:0003293;2.19e-10;6!UBERON:0003294;2.19e-10;6!UBERON:0010047;2.19e-10;6!UBERON:0003408;2.19e-10;6!UBERON:0000167;2.19e-10;6!UBERON:0004921;3.79e-09;33!UBERON:0006562;1.29e-08;2!UBERON:0001255;2.15e-08;2!UBERON:0000341;2.15e-08;2!UBERON:0001556;2.15e-08;2!UBERON:0004089;2.15e-08;2!UBERON:0000161;2.37e-07;19!UBERON:0000166;2.37e-07;19 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001829,1.24e-28,2;UBERON:0007023,1.22e-16,114;UBERON:0002372,6.44e-16,1;UBERON:0001961,6.44e-16,1;UBERON:0001744,6.44e-16,1;UBERON:0001735,6.44e-16,1;UBERON:0000029,1.54e-15,1;UBERON:0001736,2.75e-15,1;UBERON:0006298,2.75e-15,1;UBERON:0001831,3.66e-15,1;UBERON:0001567,3.66e-15,1;UBERON:0008801,3.66e-15,1;UBERON:0001044,3.19e-10,6;UBERON:0003293,3.19e-10,6;UBERON:0003294,3.19e-10,6;UBERON:0010047,3.19e-10,6;UBERON:0000167,3.19e-10,6;UBERON:0000341,1.86e-08,2;UBERON:0001255,2.15e-08,2;UBERON:0001556,2.15e-08,2;UBERON:0004089,3.08e-08,2;UBERON:0004921,6.81e-07,118 | |||
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| ||
|short_description=p1@IGHV3-11 | |||
}} | }} |
Latest revision as of 22:07, 18 September 2015
Short description: | p1@IGHV3-11 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_IGHV3-11_5end |
Coexpression cluster: | C282_acute_B_tonsil_CD19_submaxillary_lymph_throat |
Association with transcript: | 39bp_to_ENST00000390601_5end |
EntrezGene: | 100291917,100293211 |
HGNC: | 5580 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
major salivary gland | 1.24e-28 | 2 |
adult organism | 1.22e-16 | 114 |
tonsil | 6.44e-16 | 1 |
mucosa-associated lymphoid tissue | 6.44e-16 | 1 |
lymphoid tissue | 6.44e-16 | 1 |
tonsillar ring | 6.44e-16 | 1 |
lymph node | 1.54e-15 | 1 |
submandibular gland | 2.75e-15 | 1 |
submandibular gland primordium | 2.75e-15 | 1 |
parotid gland | 3.66e-15 | 1 |
cheek | 3.66e-15 | 1 |
parotid gland primordium | 3.66e-15 | 1 |
saliva-secreting gland | 3.19e-10 | 6 |
gland of oral region | 3.19e-10 | 6 |
gland of foregut | 3.19e-10 | 6 |
oral gland | 3.19e-10 | 6 |
oral cavity | 3.19e-10 | 6 |
throat | 1.86e-08 | 2 |
urinary bladder | 2.15e-08 | 2 |
lower urinary tract | 2.15e-08 | 2 |
midface | 3.08e-08 | 2 |
subdivision of digestive tract | 6.81e-07 | 118 |
Ontology term | p-value | n |
---|---|---|
acute leukemia | 5.56e-16 | 1 |