FFCP PHASE1:Hg19::chr15:40544804..40544820,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=56924 | |EntrezGene=56924 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16061 | |HGNC=16061 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=52bp_to_ENST00000560684_5end | |||
|cluster_id=chr15:40544804..40544820,+ | |||
|description=CAGE_peak_7_at_PAK6_5end | |||
|id=chr15:40544804..40544820,+ | |||
|ontology_enrichment_celltype=CL:0000066!1.17e-10!254;CL:0000039!1.37e-07!7;CL:0000586!1.37e-07!7;CL:0002322!4.97e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0000039;9.29e-19;7!CL:0000586;9.29e-19;7!CL:0000123;4.02e-12;2!CL:0000242;4.02e-12;2!CL:0000239;4.29e-08;3!CL:1000615;4.29e-08;3!CL:0002306;4.29e-08;3!CL:1001319;7.53e-07;1!CL:1000600;7.53e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,2.27e-18,7;CL:0000586,2.27e-18,7;CL:0000242,3.94e-12,2;CL:0000066,4.71e-10,253;CL:0000239,6.66e-08,3;CL:1000615,6.66e-08,3;CL:0002306,6.66e-08,3;CL:1001319,6.96e-07,1;CL:1000600,6.96e-07,1 | |||
|ontology_enrichment_development_v019=UBERON:0009117;1.31e-12;10!UBERON:0005564;1.31e-12;10 | |||
|ontology_enrichment_disease=DOID:305!1.24e-15!106;DOID:0050687!4.12e-12!143 | |||
|ontology_enrichment_disease_v019=DOID:3095;4.74e-08;22!DOID:2994;4.74e-08;22!DOID:299;6.75e-07;25 | |||
|ontology_enrichment_disease_v019_2=DOID:0050687,8.00e-19,143;DOID:305,1.28e-18,106;DOID:162,2.88e-11,235;DOID:14566,6.57e-11,239;DOID:3095,5.60e-08,22;DOID:2994,5.60e-08,22;DOID:299,7.75e-07,25 | |||
|ontology_enrichment_uberon=UBERON:0000464!1.90e-10!104;UBERON:0004119!2.26e-09!169;UBERON:0000925!2.26e-09!169;UBERON:0006595!2.26e-09!169;UBERON:0007023!4.58e-09!115;UBERON:0000466!4.59e-09!126;UBERON:0003135!1.56e-08!11;UBERON:0003101!2.12e-08!22;UBERON:0000079!2.12e-08!22;UBERON:0001007!3.70e-08!155;UBERON:0001555!3.70e-08!155;UBERON:0007026!3.70e-08!155;UBERON:0000077!4.32e-08!130;UBERON:0000473!1.09e-07!8;UBERON:0004921!1.82e-07!129;UBERON:0004185!1.82e-07!129;UBERON:0002294!8.64e-07!7;UBERON:0001173!8.64e-07!7;UBERON:0004912!8.64e-07!7;UBERON:0005153!9.35e-07!37 | |||
|ontology_enrichment_uberon_v019=UBERON:0006853;4.29e-08;3!UBERON:0007685;4.29e-08;3!UBERON:0004134;4.29e-08;3!UBERON:0004645;7.53e-07;1!UBERON:0001256;7.53e-07;1!UBERON:0001259;7.53e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006853,6.66e-08,3;UBERON:0007685,6.66e-08,3;UBERON:0004134,6.66e-08,3;UBERON:0004645,6.96e-07,1;UBERON:0001256,6.96e-07,1;UBERON:0001259,6.96e-07,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.491467873003018,2.79120467188971,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0.125542639594803,0,0,0,0,0,0,0,1.204823675113,0.739508020333575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128091319725675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0.261958150995425,0.728590576585084,0.741568885568859,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272746120590835,0,0.975789649036763,1.45782745153634,0.69716365721711,0.725627385107593,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.737930631258681,0,0.109750285408626,0,0.201057944823262,0.0925884451585296,0,0,1.44331342025273,0,0,0,0,0,0,0,0,0,0.148631162288728,0,0,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0.303127571446259,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0.604297247958111,0,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0.541892875087706,0.501689773854853,1.01950509218015,4.15538004464362,0.223874754722178,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0.384380134730212,0,0.2023155617111,0,0,0,0,0,0,0.18532421910392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192444225451024,0.670302275535787,0,0.188287601553558,0,0,0,0,0,0,0.569647187174163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.324621940274555,0,0,0,0,0,0,0.201799707191048,0,0,0,0,0,0,0,0,0,0,0,1.68426486367398,0,0,0,0,0.95497793895076,0.296964680832639,0,0,0.140669416410513,0,0,0.844501632511974,0,0.276283915531148,0.503865495708552,0,0.615424027305347,0,0.898683511473268,0.895105873378046,0,0,0,0,0,0,0,0.260427761085233,0.262379999988587,0,1.365521379426,1.01701460117107,0.945550727071745,1.03423011972439,0,0.347249989866585,0,0.241192877250816,0,0.552896299656123,0.886642856860642,0,0,0,0,0,2.3056390438806,0,5.75831071186643,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0.424059214301822,0,0.995261931078505,0.176915129006678,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.867798691675654,0,1.82824333818845,0.52418000472609,0,0,0,0,0.484945082442097,0,0,0,0,0,1.56441106187842,0.320635281006135,0.213452994739353,0,0.576361668616424,0,0,0.14405479798815,0,2.12124631155116,0,0,0,0,0,0,0,0,0,0,0,0,1.59743200399193,0.429226048136571,0,0,0,0,0,0,0,0.0984274815147488,0,0,0.136203406111576,0.160753148465019,0.687697182986169,1.24632101408756,0.2249738915515,0,0,0,0.157611414598396,0.209818352539992,0,0,0.191915197319445,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,1.40963004463334,0.213574825135389,0.157204305099666,0,0,0,0,0,0,0,0,0,0.314108192500469,0,0,0.1251909307065,0,0.110929051536852,0.124192805882767,0.138348634936231,0,0,0,0,2.34167452903441,3.04334160082733,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.07220795687463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05656061679314,0,0.106691729694141,0,0,0,0.419638523158333,0,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0,0,0,0,0,0.205116364240755,0,0.0691572524642179,0,0,0,1.1796972334774,0,0,0,0,0,0,0,0.781514011233092,1.57144016688853,0,1.33070477595341,0.135075169236789,0.781078098613847,0.206686796501184,0.126831620387814,0,1.09651553371436,0.496211178389294,0.527613733078862,0,1.07140367175657,0.336283722218824,0,0.682986574053893,0.79832133146375,0.345701962667338,0,0,0.0657727735628491,0.354581522651905,1.4460082245969,0.39246546425257,0,1.96190514319652,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0.68732060563215,0,0,1.00669888618013,2.15930513953535,0.731507549893617,0,0,0,0,1.63757624423474,0.397901550322736,0.713520544665411,0.67767649223376,0,1.50962843566674,0.0771741581079447,0.655678681511872,0,0,1.64973582971138,0,0,0,0,0,0,0,0.178553938605658,0,0,1.46067277649303,0.458729283404541,0,0,0.0679914901909147,0,0,0,0,0,0,0.109265571963696,0.253397002022874,1.01988829741982,1.06886962106224,1.19463369395298,0.50141507858475,0.303114792872958,0.535928260312357,0,0,0.213233981900981,0.714193294391221,0,0,0,0.445530107947154,0.606351566874658,0.653150243690884,0.342233301085281,0.404112318087525,0.358611026963382,0,2.44209805832924,0,0,0.179650404213174,0,0,0,0,0,0.320568492303233 | |phase1_expression=0,0,0,0,0,0,0,0,0,0.491467873003018,2.79120467188971,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0.125542639594803,0,0,0,0,0,0,0,1.204823675113,0.739508020333575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128091319725675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0.261958150995425,0.728590576585084,0.741568885568859,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272746120590835,0,0.975789649036763,1.45782745153634,0.69716365721711,0.725627385107593,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.737930631258681,0,0.109750285408626,0,0.201057944823262,0.0925884451585296,0,0,1.44331342025273,0,0,0,0,0,0,0,0,0,0.148631162288728,0,0,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0.303127571446259,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0.604297247958111,0,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0.541892875087706,0.501689773854853,1.01950509218015,4.15538004464362,0.223874754722178,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0.384380134730212,0,0.2023155617111,0,0,0,0,0,0,0.18532421910392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192444225451024,0.670302275535787,0,0.188287601553558,0,0,0,0,0,0,0.569647187174163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.324621940274555,0,0,0,0,0,0,0.201799707191048,0,0,0,0,0,0,0,0,0,0,0,1.68426486367398,0,0,0,0,0.95497793895076,0.296964680832639,0,0,0.140669416410513,0,0,0.844501632511974,0,0.276283915531148,0.503865495708552,0,0.615424027305347,0,0.898683511473268,0.895105873378046,0,0,0,0,0,0,0,0.260427761085233,0.262379999988587,0,1.365521379426,1.01701460117107,0.945550727071745,1.03423011972439,0,0.347249989866585,0,0.241192877250816,0,0.552896299656123,0.886642856860642,0,0,0,0,0,2.3056390438806,0,5.75831071186643,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0.424059214301822,0,0.995261931078505,0.176915129006678,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.867798691675654,0,1.82824333818845,0.52418000472609,0,0,0,0,0.484945082442097,0,0,0,0,0,1.56441106187842,0.320635281006135,0.213452994739353,0,0.576361668616424,0,0,0.14405479798815,0,2.12124631155116,0,0,0,0,0,0,0,0,0,0,0,0,1.59743200399193,0.429226048136571,0,0,0,0,0,0,0,0.0984274815147488,0,0,0.136203406111576,0.160753148465019,0.687697182986169,1.24632101408756,0.2249738915515,0,0,0,0.157611414598396,0.209818352539992,0,0,0.191915197319445,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,1.40963004463334,0.213574825135389,0.157204305099666,0,0,0,0,0,0,0,0,0,0.314108192500469,0,0,0.1251909307065,0,0.110929051536852,0.124192805882767,0.138348634936231,0,0,0,0,2.34167452903441,3.04334160082733,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.07220795687463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05656061679314,0,0.106691729694141,0,0,0,0.419638523158333,0,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0,0,0,0,0,0.205116364240755,0,0.0691572524642179,0,0,0,1.1796972334774,0,0,0,0,0,0,0,0.781514011233092,1.57144016688853,0,1.33070477595341,0.135075169236789,0.781078098613847,0.206686796501184,0.126831620387814,0,1.09651553371436,0.496211178389294,0.527613733078862,0,1.07140367175657,0.336283722218824,0,0.682986574053893,0.79832133146375,0.345701962667338,0,0,0.0657727735628491,0.354581522651905,1.4460082245969,0.39246546425257,0,1.96190514319652,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0.68732060563215,0,0,1.00669888618013,2.15930513953535,0.731507549893617,0,0,0,0,1.63757624423474,0.397901550322736,0.713520544665411,0.67767649223376,0,1.50962843566674,0.0771741581079447,0.655678681511872,0,0,1.64973582971138,0,0,0,0,0,0,0,0.178553938605658,0,0,1.46067277649303,0.458729283404541,0,0,0.0679914901909147,0,0,0,0,0,0,0.109265571963696,0.253397002022874,1.01988829741982,1.06886962106224,1.19463369395298,0.50141507858475,0.303114792872958,0.535928260312357,0,0,0.213233981900981,0.714193294391221,0,0,0,0.445530107947154,0.606351566874658,0.653150243690884,0.342233301085281,0.404112318087525,0.358611026963382,0,2.44209805832924,0,0,0.179650404213174,0,0,0,0,0,0.320568492303233 | ||
|short_description=p7@PAK6 | |||
}} | }} |
Latest revision as of 12:53, 17 September 2015
Short description: | p7@PAK6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_PAK6_5end |
Coexpression cluster: | NA |
Association with transcript: | 52bp_to_ENST00000560684_5end |
EntrezGene: | PAK6 |
HGNC: | 16061 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 2.27e-18 | 7 |
germ cell | 2.27e-18 | 7 |
Merkel cell | 3.94e-12 | 2 |
epithelial cell | 4.71e-10 | 253 |
brush border epithelial cell | 6.66e-08 | 3 |
kidney cortex tubule cell | 6.66e-08 | 3 |
epithelial cell of proximal tubule | 6.66e-08 | 3 |
bladder cell | 6.96e-07 | 1 |
lower urinary tract cell | 6.96e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
renal cortex tubule | 6.66e-08 | 3 |
region of nephron tubule | 6.66e-08 | 3 |
proximal tubule | 6.66e-08 | 3 |
urinary bladder urothelium | 6.96e-07 | 1 |
wall of urinary bladder | 6.96e-07 | 1 |
mucosa of urinary bladder | 6.96e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
cell type cancer | 8.00e-19 | 143 |
carcinoma | 1.28e-18 | 106 |
cancer | 2.88e-11 | 235 |
disease of cellular proliferation | 6.57e-11 | 239 |
germ cell and embryonal cancer | 5.60e-08 | 22 |
germ cell cancer | 5.60e-08 | 22 |
adenocarcinoma | 7.75e-07 | 25 |