FFCP PHASE1:Hg19::chr15:67547163..67547193,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr15:67547163..67547193,+ to FFCP PHASE1:Hg19::chr15:67547163..67547193,+: NSchange) |
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(10 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=64799 | |EntrezGene=64799 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25721 | |HGNC=25721 | ||
|TSSclassifier=strong | |||
|UniProt=Q86VS3,B4E2J4 | |UniProt=Q86VS3,B4E2J4 | ||
|association_with_transcript=0bp_to_ENST00000335894,ENST00000535744,ENST00000559568,uc002aqm.2,uc002aqn.1,uc002aqo.1,uc002aqp.1,uc002aqq.1,uc010ujv.1_5end | |||
|cluster_id=chr15:67547163..67547193,+ | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_1_at_IQCH_5end | |||
|id=chr15:67547163..67547193,+ | |||
|ontology_enrichment_celltype=CL:0000066!9.40e-07!254 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,7.21e-07,253 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!6.25e-17!235;DOID:14566!5.55e-16!239;DOID:305!1.10e-15!106;DOID:0050687!3.14e-14!143;DOID:0050686!1.84e-09!137 | |||
|ontology_enrichment_disease_v019=DOID:1749;6.73e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:305,2.16e-17,106;DOID:0050687,2.83e-16,143;DOID:162,3.66e-16,235;DOID:14566,2.86e-15,239;DOID:0050686,1.37e-07,137;DOID:1749,5.72e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0005743!2.61e-08!86;UBERON:0004121!2.75e-08!169;UBERON:0000073!3.45e-08!94;UBERON:0001016!3.45e-08!94;UBERON:0001017!4.49e-08!82;UBERON:0000924!5.66e-08!173;UBERON:0006601!5.66e-08!173;UBERON:0003075!3.44e-07!86;UBERON:0007284!3.44e-07!86;UBERON:0000153!3.91e-07!129;UBERON:0007811!3.91e-07!129;UBERON:0000955!4.17e-07!69;UBERON:0006238!4.17e-07!69;UBERON:0000033!8.55e-07!123;UBERON:0002346!9.81e-07!90 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0.54503513781167,0,0.422863212287913,0,0,0,0,0,0,0.245733936501509,0,0.655324116390517,0.263766978228454,0.495065411840187,0,0.672325146451775,0,0.730310090387373,0.975865597581014,0.861847406537515,0.204000691244253,0,1.14494394852423,0.273748850145768,0.376627918784408,0.229240217243854,0.410502947249729,0.472264687882075,0.786728553697808,0,0.464448369948228,0.919421224478927,0,0.369754010166788,2.63388481973026,2.84338464974843,0,1.10799081706375,1.20326668482085,1.08505435357926,0,0,0,0,0.377875943688809,0.242584061187816,0.232429036905685,0.411167888021826,0.929119112685311,0,0,0,0,0,0,0.188242339542605,0.545812300115692,0,0.918251677112708,0.320929027076094,0,0.329851300186716,0,0,0,0,0.622822248995575,0,0,0,0,0,0.316462387440884,0,0.212604299965044,0.209658645508376,0.112328631146495,0.150176892841506,0.16072558669708,0.285012743741249,0.19891667719909,0.365328307529268,0,0.546138611262131,0,0,0,0,0,0,0.569212969109448,0.587237189370939,0,2.64342657158052,0,0.263384084775077,0.196709770113833,0,0.205601498999509,0,0,0.473447805734733,0,0.222820913770347,0,0,0.270803863765016,0.25618263945135,0.130059347559878,0.164437904603676,0.552700035571697,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0.80642697289893,0,0.144824403882799,0,0.670700859703636,0.12786256184353,0.361439152384566,0.50133791063589,0.434539556882471,1.5905718941022,1.45990461090791,0.850813354476611,0.221729397462564,0.527008714158756,8.97206667159332,0.364295288292542,0.370784442784429,0,0,0,0.238490624305342,0,0.371457501329565,0.198762407366705,0.860234595106124,0.347140501607594,0.56530794192401,0,0,0.626984899610432,0.258416759169329,0.71153252537342,0.33472061276467,0.805658634218294,0,0.24406205754817,0,0,0.625098097988558,0.22452937262617,0.112611480483322,0,0,0.183201743930407,0,0,0.436094052142534,0,0.12663051166458,1.72131935057184,1.14734648299525,0.709336764396714,0.560677600142307,2.1349799145941,0.24666754841716,0.311211035399766,0.404132016209064,0.163461903113459,0.151357427644931,0.576175924479999,0.468642863667593,0,0,0.448346041655403,1.05691048779388,0.323745888736263,0.421352420106746,0.408308342509787,0.491337269247072,0.516628905878827,0,0.741800787835671,0,0,1.0100166837244,0.125118519871964,0.831192346452549,0.877955241761676,0,0.300476117813194,0.567160915800105,0.89694817844431,0.85422955527427,0.423863802319124,0.600182192168805,0.824420233907511,0.515281080091258,0.558350568994769,0.843881661206331,0.584622030967192,1.7670364197088,0.736399189138395,0.80823028409406,0.355009592516614,0.201504196455281,0,0.193260853163297,0.272746120590835,0.573609190778008,1.09776335516636,0.265059536642971,1.2781333715647,1.0366105501537,0,0.72995471815166,1.56449532329816,0,0,0.928735856063958,0,0.236613600079688,0.337169380156203,0,0.772057809126758,0.653638332277218,0.949082476444386,0.269662616320329,0.392442930250692,1.15424147083917,0,0,0,0,0,0,0.590789906681404,1.7658523976586,0.245976877086227,0.686271241194102,1.31700342490351,1.1240175325762,1.20634766893957,1.11106134190236,0.325808305310325,0,0,1.15930404975077,1.29149563659404,0.288732895522148,0.925971025153221,0.570762456703795,0.790204397959275,1.71697232418975,0,0,0,0.93733833986777,0.671928512795438,0.992425680696705,1.52249488594842,0,0,0.492663237895943,0.352193736052904,0.414656231081544,0.144119953416961,0.25248486685276,0.507983154337352,0,1.17217447210047,0,0.102827492703324,0.300343057843917,0.285826432630578,0.672786506072164,0.87192013766656,0.4400297149257,0.129271715757778,0,0,0,0,0,0,0.799266537048298,0.428933980974443,0,1.64648067356154,0.325736184293735,0.355391948742546,0,1.20575750823834,0,0.599837947092342,0,0,0,0.479249710983165,0,0,0.434343920002738,0.61642896765115,0.895304816199478,1.00876629594175,0.197030760201927,0.431255149719035,0.513372145118994,0.76228387266739,1.30139853857622,0.773288812777695,0,1.91381625495949,0.749007023947182,0,0,0.36807447515742,0,0,0.623912584592421,0.535286966391485,0.473107245101804,0,1.20378439891088,2.27407504055985,0,0,0,1.47702144595741,0.783204629850962,0.343143423810856,0.206768026122887,0.431428401637234,0.106727557803444,0.303127571446259,0,0.604780586659361,0.496215615637554,0.153461973288062,0.561320188866147,0.640695746278505,0.511707249066704,0.160853921143607,0,0,0.177561725313127,0.246381468041427,0.519254429183621,0.581051892299796,0.120859449591622,0.802025881213139,0.276242966807689,0.229628896329213,0.546273504020151,0.524497659837696,0,0.924184045252977,0,1.46139224653261,0.633309773357254,0,0,1.51141141271498,0,0.541892875087706,0,0.509752546090077,0,0.447749509444357,0,0.261435451024901,0.512900250232778,0.328014645699706,0.650756789328606,1.03041011647722,1.92295876118521,2.0627374980147,0.574265537996172,0.650060246036521,0,0.48335359146061,0.616194468458578,0.15350367472613,0.275673144969061,1.07420244868274,1.16013355131383,1.19317278382541,1.15741646340759,0.826424576804891,0.384380134730212,1.78657797492418,0.50578890427775,0.4648455492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| ||
|short_description=p1@IQCH | |||
}} | }} |
Latest revision as of 17:42, 18 September 2015
Short description: | p1@IQCH |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_IQCH_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | 0bp_to_ENST00000335894, ENST00000535744, ENST00000559568, uc002aqm.2, uc002aqn.1, uc002aqo.1, uc002aqp.1, uc002aqq.1, uc010ujv.1_5end |
EntrezGene: | IQCH |
HGNC: | 25721 |
UniProt: | Q86VS3B4E2J4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 7.21e-07 | 253 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 2.16e-17 | 106 |
cell type cancer | 2.83e-16 | 143 |
cancer | 3.66e-16 | 235 |
disease of cellular proliferation | 2.86e-15 | 239 |
organ system cancer | 1.37e-07 | 137 |
squamous cell carcinoma | 5.72e-07 | 14 |