FFCP PHASE1:Hg19::chr16:53503935..53503948,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr16:53503935..53503948,+ to FFCP PHASE1:Hg19::chr16:53503935..53503948,+: NSchange) |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr16:53503935..53503948,+ | |||
|description=CAGE_peak_at_chr16:53503935..53503948,+ | |||
|id=chr16:53503935..53503948,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000895;3.81e-21;1!CL:0000898;6.13e-08;3!CL:0002615;6.13e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000810,3.45e-21,1;CL:0000895,3.45e-21,1;CL:0002436,3.45e-21,1;CL:0002427,3.45e-21,1;CL:0002428,3.45e-21,1;CL:0002429,3.45e-21,1;CL:0002433,3.45e-21,1;CL:0002431,3.45e-21,1;CL:0002432,3.45e-21,1;CL:0000893,2.73e-11,2;CL:0002489,2.73e-11,2;CL:0000809,2.73e-11,2;CL:0000808,2.73e-11,2;CL:0000894,2.73e-11,2;CL:0000806,2.73e-11,2;CL:0000807,2.73e-11,2;CL:0000805,2.73e-11,2;CL:0002425,2.73e-11,2;CL:0000898,5.93e-08,3;CL:0002615,8.29e-08,3 | |||
|ontology_enrichment_development_v019=CL:0002427;3.81e-21;1!CL:0002425;2.87e-11;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0.281908808191942,1.0007329835313,0,0,0,0,0.522371256399677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.305653622991805,0,0,0,0,0.309632246632152,0,0,0,0,0.142169232487422,0,0,0,0,0.223915474239924,0,0.257575567634187,0.145398238779565,0,0,0,0,0,0.28769239232215,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211255286311942,0,0.209658645508376,0.112328631146495,0.300353785683013,0.32145117339416,0,0,0.182664153764634,0,0,0.889509253863555,0.426730222566507,0,0,0.661044872784862,0.954053754535364,0,0,0.382273228125229,0,0,0.263384084775077,0,0,0,1.00311897234407,0.32592226663359,0,1.94826728407911,1.33692548262208,0.883817722424512,0.664601683750863,0.270803863765016,0.25618263945135,0,0.328875809207352,0.276350017785848,1.73881851441031,1.03800594213442,0.535081656179426,1.04535523804977,0.679856056185397,1.14966148080576,0.68725489096526,0.506039384039006,0.318565414324097,0,0,0.451725357233318,0,0,0.236777252044017,0,0.201606743224732,0.267440195783507,0.579297615531196,0,0,0.12786256184353,0,0,0.144846518960824,0,0,0,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0.81014194788176,0,0,0.112611480483322,1.53316637465883,0,0,0,0,0,0,0.12663051166458,0,0.286836620748814,0,0,0,0.24666754841716,0,0,0.326923806226917,0,0,0,0,0,0.149448680551801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30648779579902,0.150238058906597,0,0,0,0,0,0,0,0.18611685633159,0,0.0974370051611986,0,0,0.161646056818812,0,0,0,0.193260853163297,0,0,0.121973706129595,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0.168584690078102,0.241011029883482,0.220587945464788,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0.100528972411631,0.185176890317059,0,0,0,0.115930404975077,0,0.144366447761074,0,0,0,0,0,0.234004265139238,0,0,0.16798212819886,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205654985406647,0.300343057843917,0,0,0,0,0.387815147273333,0,0,0.26593811658487,0,0,0,0,0.142977993658148,0,0,0,0.355391948742546,0,0,0,0.099972991182057,0,0.502257091432126,0,0,0,0,0.144781306667579,0.410952645100767,0,0.448340575974109,0,0.646882724578552,0.641715181398742,0,0,0,0,0,0.749007023947182,0,0,0.12269149171914,0,0,0.207970861530807,0.535286966391485,0.315404830067869,0,0,0,0,0,0,0.173767228936166,0,0,0.206768026122887,0.431428401637234,0.213455115606889,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0,0,0.116210378459959,0,0.601519410909855,0.184161977871793,0,0,0.393373244878272,0,0.15403067420883,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0.214840489736547,0,0,0.0890320356467374,0.165284915360978,0,0,0.10115778085555,0.929691098594572,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0.329294892959902,0,0,0,0,0,0.376575203107117,0,0,0,0,0,0,0,0,0,0.648473311192717,0,0,0,0,0,0,0,0,0.159426272728822,0.399158742865633,0.191505370132367,0,0,0,0,0,0,0.338583555603207,0,0.201799707191048,0,0,0,0,0,0,0,0,0,0,0,0,0.586032717087576,0,0,0,0.23874448473769,0,0.614321404198464,0,0.140669416410513,0.333926115068718,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0.295930216910801,0,0,0,0.0927680981618513,0,0,0.0874599999961957,0,0,0.254253650292766,0,0,0,0,0,0,0,0.110579259931225,0.295547618953547,0,0.10893846351899,0,0.0769502585037971,0,0,0,0.108647371922008,0.31900115973192,0.0915975934018623,0,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207376382794494,0,0,0,0,0,0,0.347119476670262,0,0,0.34945333648406,0,0.0967563312890851,0,0.246346371159628,0.0969890164884194,0.0882561266915003,0,0.137041924646751,0,0,0.195551382734803,0,0.426905989478705,0,0,0,0.171594997861965,0.14405479798815,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0.199679000498991,0,0,0.0671834724867263,0,0,0,0.0824158583811665,0.0674035438541849,0.0984274815147488,0,0,0.272406812223151,0.160753148465019,0.137539436597234,0.415440338029185,0,0,0.0607495566580247,0,0.157611414598396,0.0524545881349981,0,0.179287339332845,0,0,0,0,0,0,0.326587360109409,0,0,0.170388021785422,0.113312091520126,0.146552233678082,0,0,0.26446520348538,0,0,0,0.314408610199332,0.414239055347196,0,0,0.121792598380896,0,0,0,0,0.327872630709804,0,0,0.244052529803926,0.1251909307065,0,0.221858103073705,0,0,0,0.151649117541648,0,0.235265819698172,0,0,0,0.233713309847224,0,0,0.251567901752575,0,0,0.151230923763239,0,0.147855149989634,0,0,0,0,0,0,0,0,0,0,0.214821114084977,0,0,0,0,0,0,0,0,0.260994291965212,0,0,0,0,0,0.219284049578707,0,0,0,0.256241518587947,0,0,0,0.389720617678777,0.132864840313363,0.163565394255844,0,0.245772908753719,0,0.19998739585493,0,0,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0.157723490002507,0,0,0,0,0,0.319267718114302,0,0,0,0,0,0.0981477185010256,0,0,0,0,0,0,0.225630985047772,0,0,0,0,0,0.0675375846183947,0,0,0,0,0,0.496211178389294,0.175871244359621,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0.156986185701028,0,0,0,0,0,0,0,0.116241425368125,0,0,0,0.17071847709395,0,0,0,0.0852134047591577,0,0,0,0,0,0.098150233615243,0.243835849964539,0,0.102662806856247,0,0,0.233939463462106,0,0,0,0.109940516745429,0,0.154348316215889,0,0,0,0,0,0,0,0,0.187967835959707,0,0.0999411559249289,0,0,0,0,0,0.286679166302903,0.315543124386369,0,0,0,0,0,0,0,0,0.126698501011437,0,0,0,0.250707539292375,1.06090177505535,0,0,0.103432995861895,0.213233981900981,0,0.258355639344024,0.0620747142958579,0,0.318235791390825,0,0.217716747896961,0,0,0.0717222053926763,0,0,0.213454691755431,0,0,0,0.244482888365733,0,0,0.402547587182052,0.320568492303233 | |phase1_expression=0,0,0.281908808191942,1.0007329835313,0,0,0,0,0.522371256399677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.305653622991805,0,0,0,0,0.309632246632152,0,0,0,0,0.142169232487422,0,0,0,0,0.223915474239924,0,0.257575567634187,0.145398238779565,0,0,0,0,0,0.28769239232215,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211255286311942,0,0.209658645508376,0.112328631146495,0.300353785683013,0.32145117339416,0,0,0.182664153764634,0,0,0.889509253863555,0.426730222566507,0,0,0.661044872784862,0.954053754535364,0,0,0.382273228125229,0,0,0.263384084775077,0,0,0,1.00311897234407,0.32592226663359,0,1.94826728407911,1.33692548262208,0.883817722424512,0.664601683750863,0.270803863765016,0.25618263945135,0,0.328875809207352,0.276350017785848,1.73881851441031,1.03800594213442,0.535081656179426,1.04535523804977,0.679856056185397,1.14966148080576,0.68725489096526,0.506039384039006,0.318565414324097,0,0,0.451725357233318,0,0,0.236777252044017,0,0.201606743224732,0.267440195783507,0.579297615531196,0,0,0.12786256184353,0,0,0.144846518960824,0,0,0,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0.81014194788176,0,0,0.112611480483322,1.53316637465883,0,0,0,0,0,0,0.12663051166458,0,0.286836620748814,0,0,0,0.24666754841716,0,0,0.326923806226917,0,0,0,0,0,0.149448680551801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30648779579902,0.150238058906597,0,0,0,0,0,0,0,0.18611685633159,0,0.0974370051611986,0,0,0.161646056818812,0,0,0,0.193260853163297,0,0,0.121973706129595,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0.168584690078102,0.241011029883482,0.220587945464788,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0.100528972411631,0.185176890317059,0,0,0,0.115930404975077,0,0.144366447761074,0,0,0,0,0,0.234004265139238,0,0,0.16798212819886,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205654985406647,0.300343057843917,0,0,0,0,0.387815147273333,0,0,0.26593811658487,0,0,0,0,0.142977993658148,0,0,0,0.355391948742546,0,0,0,0.099972991182057,0,0.502257091432126,0,0,0,0,0.144781306667579,0.410952645100767,0,0.448340575974109,0,0.646882724578552,0.641715181398742,0,0,0,0,0,0.749007023947182,0,0,0.12269149171914,0,0,0.207970861530807,0.535286966391485,0.315404830067869,0,0,0,0,0,0,0.173767228936166,0,0,0.206768026122887,0.431428401637234,0.213455115606889,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0,0,0.116210378459959,0,0.601519410909855,0.184161977871793,0,0,0.393373244878272,0,0.15403067420883,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0.214840489736547,0,0,0.0890320356467374,0.165284915360978,0,0,0.10115778085555,0.929691098594572,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0.329294892959902,0,0,0,0,0,0.376575203107117,0,0,0,0,0,0,0,0,0,0.648473311192717,0,0,0,0,0,0,0,0,0.159426272728822,0.399158742865633,0.191505370132367,0,0,0,0,0,0,0.338583555603207,0,0.201799707191048,0,0,0,0,0,0,0,0,0,0,0,0,0.586032717087576,0,0,0,0.23874448473769,0,0.614321404198464,0,0.140669416410513,0.333926115068718,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0.295930216910801,0,0,0,0.0927680981618513,0,0,0.0874599999961957,0,0,0.254253650292766,0,0,0,0,0,0,0,0.110579259931225,0.295547618953547,0,0.10893846351899,0,0.0769502585037971,0,0,0,0.108647371922008,0.31900115973192,0.0915975934018623,0,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207376382794494,0,0,0,0,0,0,0.347119476670262,0,0,0.34945333648406,0,0.0967563312890851,0,0.246346371159628,0.0969890164884194,0.0882561266915003,0,0.137041924646751,0,0,0.195551382734803,0,0.426905989478705,0,0,0,0.171594997861965,0.14405479798815,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0.199679000498991,0,0,0.0671834724867263,0,0,0,0.0824158583811665,0.0674035438541849,0.0984274815147488,0,0,0.272406812223151,0.160753148465019,0.137539436597234,0.415440338029185,0,0,0.0607495566580247,0,0.157611414598396,0.0524545881349981,0,0.179287339332845,0,0,0,0,0,0,0.326587360109409,0,0,0.170388021785422,0.113312091520126,0.146552233678082,0,0,0.26446520348538,0,0,0,0.314408610199332,0.414239055347196,0,0,0.121792598380896,0,0,0,0,0.327872630709804,0,0,0.244052529803926,0.1251909307065,0,0.221858103073705,0,0,0,0.151649117541648,0,0.235265819698172,0,0,0,0.233713309847224,0,0,0.251567901752575,0,0,0.151230923763239,0,0.147855149989634,0,0,0,0,0,0,0,0,0,0,0.214821114084977,0,0,0,0,0,0,0,0,0.260994291965212,0,0,0,0,0,0.219284049578707,0,0,0,0.256241518587947,0,0,0,0.389720617678777,0.132864840313363,0.163565394255844,0,0.245772908753719,0,0.19998739585493,0,0,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0.157723490002507,0,0,0,0,0,0.319267718114302,0,0,0,0,0,0.0981477185010256,0,0,0,0,0,0,0.225630985047772,0,0,0,0,0,0.0675375846183947,0,0,0,0,0,0.496211178389294,0.175871244359621,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0.156986185701028,0,0,0,0,0,0,0,0.116241425368125,0,0,0,0.17071847709395,0,0,0,0.0852134047591577,0,0,0,0,0,0.098150233615243,0.243835849964539,0,0.102662806856247,0,0,0.233939463462106,0,0,0,0.109940516745429,0,0.154348316215889,0,0,0,0,0,0,0,0,0.187967835959707,0,0.0999411559249289,0,0,0,0,0,0.286679166302903,0.315543124386369,0,0,0,0,0,0,0,0,0.126698501011437,0,0,0,0.250707539292375,1.06090177505535,0,0,0.103432995861895,0.213233981900981,0,0.258355639344024,0.0620747142958579,0,0.318235791390825,0,0.217716747896961,0,0,0.0717222053926763,0,0,0.213454691755431,0,0,0,0.244482888365733,0,0,0.402547587182052,0.320568492303233 | ||
|short_description=p@chr16:53503935..53503948,+ | |||
}} | }} |
Latest revision as of 09:46, 25 July 2015
Short description: | p@chr16:53503935..53503948, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:53503935..53503948, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD4-positive, alpha-beta thymocyte | 3.45e-21 | 1 |
naive thymus-derived CD4-positive, alpha-beta T cell | 3.45e-21 | 1 |
mature CD4 single-positive thymocyte | 3.45e-21 | 1 |
resting double-positive thymocyte | 3.45e-21 | 1 |
double-positive blast | 3.45e-21 | 1 |
CD69-positive double-positive thymocyte | 3.45e-21 | 1 |
CD69-positive, CD4-positive single-positive thymocyte | 3.45e-21 | 1 |
CD4-positive, CD8-intermediate double-positive thymocyte | 3.45e-21 | 1 |
CD24-positive, CD4 single-positive thymocyte | 3.45e-21 | 1 |
thymocyte | 2.73e-11 | 2 |
double negative thymocyte | 2.73e-11 | 2 |
double-positive, alpha-beta thymocyte | 2.73e-11 | 2 |
DN4 thymocyte | 2.73e-11 | 2 |
DN1 thymic pro-T cell | 2.73e-11 | 2 |
DN2 thymocyte | 2.73e-11 | 2 |
DN3 thymocyte | 2.73e-11 | 2 |
immature single positive thymocyte | 2.73e-11 | 2 |
early T lineage precursor | 2.73e-11 | 2 |
naive T cell | 5.93e-08 | 3 |
adipocyte of omentum tissue | 8.29e-08 | 3 |