FFCP PHASE1:Hg19::chr19:50399335..50399348,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr19:50399335..50399348,- | |||
|coexpression_cluster_id=C36 | |||
|description=CAGE_peak_at_chr19:50399335..50399348,- | |||
|id=chr19:50399335..50399348,- | |||
|ontology_enrichment_celltype=CL:0000738!1.78e-29!140;CL:0002087!1.32e-28!119;CL:0002057!7.31e-27!42;CL:0000988!3.25e-26!182;CL:0000860!7.89e-25!45;CL:0000037!1.58e-24!172;CL:0000566!1.58e-24!172;CL:0002031!3.55e-23!124;CL:0002032!2.42e-22!165;CL:0000837!2.42e-22!165;CL:0002194!3.83e-21!63;CL:0000576!3.83e-21!63;CL:0000040!3.83e-21!63;CL:0000559!3.83e-21!63;CL:0002009!2.23e-20!65;CL:0000766!5.99e-19!76;CL:0000839!1.18e-18!70;CL:0000557!2.45e-18!71;CL:0000763!2.63e-16!112;CL:0000049!2.63e-16!112;CL:0000080!1.00e-12!6;CL:0000134!3.33e-08!358;CL:0002320!6.49e-08!365;CL:0000623!1.99e-07!3;CL:0000825!1.99e-07!3;CL:0000842!3.34e-07!3;CL:0000945!3.49e-07!24;CL:0000826!3.49e-07!24;CL:0000219!6.79e-07!390 | |||
|ontology_enrichment_celltype_v019=CL:0000945;1.01e-13;24!CL:0000473;4.82e-07;39!CL:0000234;4.82e-07;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,1.08e-13,24;CL:0000826,1.08e-13,24;CL:0000738,2.65e-11,136;CL:0002087,1.34e-10,115;CL:0002031,3.81e-10,120;CL:0002032,1.75e-09,161;CL:0000837,1.75e-09,161;CL:0000037,4.55e-09,168;CL:0000988,1.39e-08,177;CL:0000473,6.32e-07,48;CL:0000234,6.32e-07,48 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2355;6.31e-21;1!DOID:74;3.70e-11;2!DOID:0060058;6.93e-09;10 | |||
|ontology_enrichment_disease_v019_2=DOID:2355,9.43e-21,1;DOID:74,4.52e-11,2;DOID:0060058,7.36e-09,10 | |||
|ontology_enrichment_uberon=UBERON:0002390!2.98e-24!102;UBERON:0003061!2.98e-24!102;UBERON:0002193!1.46e-23!112;UBERON:0002371!7.58e-16!80;UBERON:0002405!1.21e-15!115;UBERON:0001474!1.79e-14!86;UBERON:0004765!9.33e-12!101;UBERON:0001434!9.33e-12!101;UBERON:0003081!1.54e-09!216;UBERON:0002384!1.61e-07!375;UBERON:0002106!1.64e-07!3;UBERON:0004854!1.64e-07!3;UBERON:0009034!1.64e-07!3;UBERON:0002095!1.64e-07!3;UBERON:0004782!1.64e-07!3;UBERON:0003281!1.64e-07!3;UBERON:0009664!1.64e-07!3;UBERON:0002296!1.64e-07!3;UBERON:0005602!1.64e-07!3;UBERON:0001179!1.64e-07!3;UBERON:0006293!1.64e-07!3;UBERON:0004177!7.61e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0002106;5.73e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,5.54e-08,3;UBERON:0004854,5.54e-08,3;UBERON:0009034,5.54e-08,3;UBERON:0002095,5.54e-08,3;UBERON:0004782,5.54e-08,3;UBERON:0003281,5.54e-08,3;UBERON:0009664,5.54e-08,3;UBERON:0002296,5.54e-08,3;UBERON:0005602,5.54e-08,3;UBERON:0001179,5.54e-08,3;UBERON:0006293,5.54e-08,3 | |||
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|short_description=p@chr19:50399335..50399348,- | |||
}} | }} |
Latest revision as of 16:17, 27 July 2015
Short description: | p@chr19:50399335..50399348, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:50399335..50399348, - |
Coexpression cluster: | C36_B_b_splenic_plasma_xeroderma_adrenal_Burkitt |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 1.08e-13 | 24 |
pro-B cell | 1.08e-13 | 24 |
leukocyte | 2.65e-11 | 136 |
nongranular leukocyte | 1.34e-10 | 115 |
hematopoietic lineage restricted progenitor cell | 3.81e-10 | 120 |
hematopoietic oligopotent progenitor cell | 1.75e-09 | 161 |
hematopoietic multipotent progenitor cell | 1.75e-09 | 161 |
hematopoietic stem cell | 4.55e-09 | 168 |
hematopoietic cell | 1.39e-08 | 177 |
defensive cell | 6.32e-07 | 48 |
phagocyte | 6.32e-07 | 48 |
Ontology term | p-value | n |
---|---|---|
spleen | 5.54e-08 | 3 |
gastrointestinal system mesentery | 5.54e-08 | 3 |
stomach region | 5.54e-08 | 3 |
mesentery | 5.54e-08 | 3 |
gastrointestinal system serosa | 5.54e-08 | 3 |
mesentery of stomach | 5.54e-08 | 3 |
gut mesentery | 5.54e-08 | 3 |
dorsal mesentery | 5.54e-08 | 3 |
dorsal mesogastrium | 5.54e-08 | 3 |
peritoneal cavity | 5.54e-08 | 3 |
spleen primordium | 5.54e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
anemia | 9.43e-21 | 1 |
hematopoietic system disease | 4.52e-11 | 2 |
lymphoma | 7.36e-09 | 10 |