FFCP PHASE1:Hg19::chr21:9831035..9831065,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr21:9831035..9831065,+ | |||
|coexpression_cluster_id=C1074 | |||
|description=CAGE_peak_at_chr21:9831035..9831065,+ | |||
|id=chr21:9831035..9831065,+ | |||
|ontology_enrichment_celltype=CL:0000039!3.65e-14!7;CL:0000586!3.65e-14!7 | |||
|ontology_enrichment_celltype_v019=CL:0000039;6.93e-18;7!CL:0000586;6.93e-18;7!CL:0000167;6.98e-09;1!CL:0000164;6.98e-09;1!CL:0000502;6.98e-09;1!CL:0000172;6.98e-09;1!CL:0000173;6.98e-09;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,6.80e-18,7;CL:0000586,6.80e-18,7;CL:0000167,6.72e-09,1;CL:0000164,6.72e-09,1;CL:0000502,6.72e-09,1;CL:0000172,6.72e-09,1;CL:0000173,6.72e-09,1;CL:0002351,6.72e-09,1 | |||
|ontology_enrichment_development_v019=UBERON:0009117;1.39e-12;10!UBERON:0005564;1.39e-12;10!CL:0002351;6.98e-09;1!UBERON:0004161;4.64e-07;11 | |||
|ontology_enrichment_disease=DOID:14566!2.31e-15!239;DOID:162!3.82e-14!235;DOID:0050687!5.27e-14!143;DOID:305!1.99e-11!106;DOID:1036!1.89e-08!8;DOID:0050615!5.39e-07!16;DOID:3095!7.75e-07!22;DOID:2994!7.75e-07!22 | |||
|ontology_enrichment_disease_v019=DOID:4430;6.98e-09;1!DOID:3095;1.36e-08;22!DOID:2994;1.36e-08;22 | |||
|ontology_enrichment_disease_v019_2=DOID:0050687,4.47e-16,143;DOID:14566,1.58e-14,239;DOID:162,1.79e-13,235;DOID:305,1.07e-11,106;DOID:4430,6.72e-09,1;DOID:3095,1.34e-08,22;DOID:2994,1.34e-08,22 | |||
|ontology_enrichment_uberon=UBERON:0000473!1.80e-08!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;1.12e-15;8!UBERON:0003135;1.86e-11;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,1.49e-15,8;UBERON:0003135,2.29e-11,11 | |||
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| ||
|short_description=p@chr21:9831035..9831065,+ | |||
}} | }} |
Latest revision as of 18:54, 28 July 2015
Short description: | p@chr21:9831035..9831065, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr21:9831035..9831065, + |
Coexpression cluster: | C1074_chronic_testicular_melanoma_hepatocellular_pagetoid_acute_Small |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 6.80e-18 | 7 |
germ cell | 6.80e-18 | 7 |
peptide hormone secreting cell | 6.72e-09 | 1 |
enteroendocrine cell | 6.72e-09 | 1 |
type D enteroendocrine cell | 6.72e-09 | 1 |
somatostatin secreting cell | 6.72e-09 | 1 |
pancreatic D cell | 6.72e-09 | 1 |
progenitor cell of endocrine pancreas | 6.72e-09 | 1 |
Ontology term | p-value | n |
---|---|---|
testis | 1.49e-15 | 8 |
male reproductive organ | 2.29e-11 | 11 |
Ontology term | p-value | n |
---|---|---|
cell type cancer | 4.47e-16 | 143 |
disease of cellular proliferation | 1.58e-14 | 239 |
cancer | 1.79e-13 | 235 |
carcinoma | 1.07e-11 | 106 |
somatostatinoma | 6.72e-09 | 1 |
germ cell and embryonal cancer | 1.34e-08 | 22 |
germ cell cancer | 1.34e-08 | 22 |