FFCP PHASE1:Hg19::chr3:11685513..11685524,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr3:11685513..11685524,- to FFCP PHASE1:Hg19::chr3:11685513..11685524,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9686 | |EntrezGene=9686 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28966 | |HGNC=28966 | ||
|TSSclassifier=strong | |||
|UniProt=G5E9M7,Q14135 | |UniProt=G5E9M7,Q14135 | ||
|association_with_transcript=-115bp_to_ENST00000430365,NM_001128219,uc010hdx.1_5end | |||
|cluster_id=chr3:11685513..11685524,- | |||
|description=CAGE_peak_14_at_VGLL4_5end | |||
|id=chr3:11685513..11685524,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000128;1.88e-10;7!CL:0000126;1.88e-10;7!CL:0000127;1.88e-10;7!CL:0002139;3.52e-08;24!CL:1000413;1.09e-07;9!CL:0000064;3.36e-07;3!CL:0000067;3.36e-07;3!CL:0005012;3.36e-07;3!CL:0002304;3.36e-07;3!CL:0002603;3.36e-07;3!CL:0002605;8.78e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000128,3.73e-10,7;CL:0000126,3.73e-10,7;CL:0000127,3.73e-10,7;CL:0002453,3.73e-10,7;CL:0002139,3.03e-08,24;CL:1000413,5.75e-08,9;CL:0000064,1.10e-07,3;CL:0000067,1.10e-07,3;CL:0005012,1.10e-07,3;CL:0002304,1.10e-07,3;CL:0002603,1.23e-07,3;CL:0000115,5.54e-07,36 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002049!9.63e-07!79;UBERON:0007798!9.63e-07!79 | |||
|ontology_enrichment_uberon_v019=UBERON:0006876;4.15e-09;11!UBERON:0000488;6.45e-09;4!UBERON:0007625;1.67e-08;11!UBERON:0003915;1.09e-07;9!UBERON:0004700;1.09e-07;9!UBERON:0001917;1.09e-07;9!UBERON:0001778;3.36e-07;3!UBERON:0001775;3.36e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002049,2.02e-09,78;UBERON:0007798,2.02e-09,78;UBERON:0006876,2.67e-09,11;UBERON:0000488,4.71e-09,4;UBERON:0007625,6.31e-09,11;UBERON:0003915,5.75e-08,9;UBERON:0004700,5.75e-08,9;UBERON:0001917,5.75e-08,9;UBERON:0001778,1.10e-07,3;UBERON:0001775,1.10e-07,3 | |||
|phase1_expression=0.726713517082227,0.428201047781966,0.563817616383885,0,0.893922188854576,0,5.06599756336621,0,0,0.245733936501509,0,0.218441372130172,0,0.74259811776028,0.331397375727916,0,1.20538905604795,1.46062018077475,0.487932798790507,1.35433163884467,1.83600622119828,2.19418305034661,1.14494394852423,1.09499540058307,1.00434111675842,0.61130724598361,0.821005894499457,0.865818594450472,0,1.15148819429164,0.154816123316076,0,0,0,0.154934401160603,0.142169232487422,0,0,0,0,0,0.647787332037959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199463657621632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16072558669708,0,0,0,0,0,0.889509253863555,0.426730222566507,0.400395987036012,0,0.661044872784862,0,0,0,0,0,0,0.526768169550154,0,0,0.616804496998528,0.167186495390678,0,0,0,0.111410456885174,0,0,0,0.128091319725675,0.390178042679635,0.493313713811028,0.829050053357545,0.289803085735052,0,0.267540828089713,1.04535523804977,0.453237370790265,0,0.68725489096526,1.01207876807801,0,0,0,0.301150238155546,0.255973222308837,0,0.947109008176067,0,0.201606743224732,0.267440195783507,0.289648807765598,0,0.670700859703636,0.255725123687061,0.361439152384566,0.50133791063589,0.724232594804119,0.795285947051099,0.486634870302636,1.51255707462509,1.77383517970051,2.19586964232815,0.523916301990851,0,0,0.324547393654683,0,0.132957960518865,0.238490624305342,0,0,1.19257444420023,0.860234595106124,0.694281003215189,1.13061588384802,1.25849830862972,1.6507082516404,1.67195973229448,1.03366703667732,0.71153252537342,0.66944122552934,0,0,0,0.735326160691737,1.62028389576352,0.267899184852239,0,0.563057402416611,0,2.84779697870439,1.83201743930407,0,0,0,0,0.506522046658319,0.132409180813219,0.573673241497627,0.354668382198357,0.560677600142307,0,0.98667019366864,0.311211035399766,0,0.490385709340376,3.93529311876822,6.33793516927999,0,0,0,0.149448680551801,0,0.161872944368132,0,0,0.245668634623536,0.103325781175765,1.18800285728205,0.247266929278557,0,0,0.168336113954066,0.375355559615893,0,0.877955241761676,0,0.600952235626387,0.453728732640084,0,0,0.423863802319124,0,0.206105058476878,0.515281080091258,0.18611685633159,1.18143432568886,0.292311015483596,0.757301322732344,0,0,0,0.10075209822764,0.508681776931463,0,0,0,0.243947412259191,0.265059536642971,0.232387885739037,1.0366105501537,1.00928340350251,0.36497735907583,0,0,1.38134921352481,0,0,0.118306800039844,0,0,0.220587945464788,0.217879444092406,0.474541238222193,0.134831308160164,0.196221465125346,0,1.4763109092493,2.80483547606892,0.8231480226628,0,1.26755034821831,0,0.590789906681404,0.882926198829301,0.245976877086227,1.02940686179115,0.219500570817251,0,0,0.0925884451585296,0,0,1.44331342025273,0.231860809950154,1.52631302506568,1.15493158208859,0,1.14152491340759,0,0,0,0,0,0,0,0,0,0,0,0.985326475791887,0.176096868026452,0.207328115540772,0,0,0.571481048629521,0,0,0,0.925447434329912,0.300343057843917,0.285826432630578,0.897048674762886,1.30788020649984,1.54010400223995,1.55126058909333,0,0,0.26593811658487,0,0,0,0.799266537048298,0.857867961948885,0,0,0,0.710783897485092,0,0,0,0.099972991182057,1.2162378064119,0.502257091432126,0,0.479249710983165,0,0,0,0.205476322550383,0.537182889719687,0.336255431980582,0.788123040807709,0.431255149719035,0.256686072559497,3.30323011489202,1.30139853857622,0.773288812777695,0.837581326671744,2.55175500661265,0,0,0,0.981531933753119,1.50051156317903,0.271265023699736,0,0.356857977594324,0.157702415033935,0.35142424497814,0.300946099727719,2.27407504055985,0,0,0.368738337083406,0.0868836144680828,6.06983588134496,5.49029478097369,0.206768026122887,0,0.320182673410333,0,1.66435439510497,0,0.248107807818777,0.306923946576125,0,0.512556597022804,0.511707249066704,0.482561763430822,0,0.308419387605311,0.177561725313127,0.164254312027618,0,0.348631135379878,0.362578348774867,0,0.0920809889358963,0.114814448164607,0,0.131124414959424,0.451199612907412,0.0770153371044148,2.35304930753057,0,1.16106791782163,0,0.340187410553031,0,0,0.812839312631559,2.00675909541941,0,0,0.895499018888713,0,0,0,0,1.62689197332152,0,0.0915694648183434,0.247528499761764,0,0,0,0.580024309752732,1.07834031980251,0.460511024178389,0.137836572484531,0.644521469209642,0.290033387828457,0.255679882248303,1.33548053470106,0,0.192190067365106,0,0,0,0.31481234683064,0,0,0.532306030317022,0,0.18532421910392,0.715624433709956,1.48863347743867,0.316379424718726,0.953150969619124,0,0,0,0.78494864019923,0,0.274537029736055,0,0.404364963146632,0,0.842516912477962,0,0.243713489631284,0,0.136499911407986,0.141405431953713,0,0,1.32687795048244,0,0,0.655894752046633,0.202910376962704,0.6196469961995,1.40847801266121,0.286822704408103,0.196498082026242,0,0.709522128141196,0.844430541190656,0.329294892959902,0,0,0.0962221127255121,0,0,0.188287601553558,0,0,0,0,0,0,0,0.238231775457789,0,0,0,0,0.427296284509893,0,0,0.185803175125719,0.577076851905779,0.782560276832555,0.956557636372934,2.19537308576098,0.191505370132367,0.211673582723883,1.94773164164733,0.842391534340376,1.82587743226554,0,0,0.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| ||
|short_description=p14@VGLL4 | |||
}} | }} |
Latest revision as of 18:49, 19 September 2015
Short description: | p14@VGLL4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_14_at_VGLL4_5end |
Coexpression cluster: | NA |
Association with transcript: | -115bp_to_ENST00000430365, NM_001128219, uc010hdx.1_5end |
EntrezGene: | VGLL4 |
HGNC: | 28966 |
UniProt: | G5E9M7Q14135 |
Genome view: | ZENBU |
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CAGE Expression
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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
oligodendrocyte | 3.73e-10 | 7 |
macroglial cell | 3.73e-10 | 7 |
astrocyte | 3.73e-10 | 7 |
oligodendrocyte precursor cell | 3.73e-10 | 7 |
endothelial cell of vascular tree | 3.03e-08 | 24 |
endothelial cell of artery | 5.75e-08 | 9 |
ciliated cell | 1.10e-07 | 3 |
ciliated epithelial cell | 1.10e-07 | 3 |
multi-ciliated epithelial cell | 1.10e-07 | 3 |
non-pigmented ciliary epithelial cell | 1.10e-07 | 3 |
astrocyte of the cerebellum | 1.23e-07 | 3 |
endothelial cell | 5.54e-07 | 36 |
Ontology term | p-value | n |
---|---|---|
vasculature | 2.02e-09 | 78 |
vascular system | 2.02e-09 | 78 |
vasculature of organ | 2.67e-09 | 11 |
atypical epithelium | 4.71e-09 | 4 |
pigment epithelium of eye | 6.31e-09 | 11 |
endothelial tube | 5.75e-08 | 9 |
arterial system endothelium | 5.75e-08 | 9 |
endothelium of artery | 5.75e-08 | 9 |
ciliary epithelium | 1.10e-07 | 3 |
ciliary body | 1.10e-07 | 3 |