FFCP PHASE1:Hg19::chr3:16555048..16555063,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr3:16555048..16555063,- to FFCP PHASE1:Hg19::chr3:16555048..16555063,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=23180 | |EntrezGene=23180 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30278 | |HGNC=30278 | ||
|TSSclassifier=strong | |||
|UniProt=F8WAR1 | |UniProt=F8WAR1 | ||
|association_with_transcript=-19bp_to_ENST00000453536_5end | |||
|cluster_id=chr3:16555048..16555063,- | |||
|coexpression_cluster_id=C4303 | |||
|description=CAGE_peak_6_at_RFTN1_5end | |||
|id=chr3:16555048..16555063,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000136;1.69e-11;13!CL:0000453;2.76e-08;5!CL:0002334;7.87e-08;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,1.32e-11,15;CL:0000453,2.12e-08,5;CL:0002334,1.26e-07,12 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0003688;2.82e-08;6!UBERON:0002358;2.82e-08;6!UBERON:0003684;2.82e-08;6!UBERON:0001178;2.82e-08;6!UBERON:0004457;8.88e-07;9!UBERON:0000042;8.88e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,6.37e-08,6;UBERON:0002358,6.37e-08,6;UBERON:0003684,6.37e-08,6;UBERON:0001178,6.37e-08,6;UBERON:0004457,1.18e-07,12;UBERON:0000042,1.18e-07,12 | |||
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| ||
|short_description=p6@RFTN1 | |||
}} | }} |
Latest revision as of 13:09, 16 September 2015
Short description: | p6@RFTN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_RFTN1_5end |
Coexpression cluster: | C4303_migratory_cord_Mast_immature_Adipocyte_mature_mycosis |
Association with transcript: | -19bp_to_ENST00000453536_5end |
EntrezGene: | RFTN1 |
HGNC: | 30278 |
UniProt: | F8WAR1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 1.32e-11 | 15 |
Langerhans cell | 2.12e-08 | 5 |
preadipocyte | 1.26e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
omentum | 6.37e-08 | 6 |
peritoneum | 6.37e-08 | 6 |
abdominal cavity | 6.37e-08 | 6 |
visceral peritoneum | 6.37e-08 | 6 |
cavity lining | 1.18e-07 | 12 |
serous membrane | 1.18e-07 | 12 |