FFCP PHASE1:Hg19::chr4:42154275..42154297,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr4:42154275..42154297,- to FFCP PHASE1:Hg19::chr4:42154275..42154297,-: NSchange) |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=389206 | |EntrezGene=389206 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=23815 | |HGNC=23815 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=95bp_to_uc011byy.1_5end | |||
|cluster_id=chr4:42154275..42154297,- | |||
|coexpression_cluster_id=C4414 | |||
|description=CAGE_peak_3_at_BEND4_5end | |||
|id=chr4:42154275..42154297,- | |||
|ontology_enrichment_celltype=CL:0002322!1.01e-07!5;CL:0000047!3.05e-07!8;CL:0000945!3.80e-07!24;CL:0000826!3.80e-07!24;CL:0000540!4.66e-07!6;CL:0000031!4.66e-07!6;CL:0000404!4.66e-07!6;CL:0002319!8.41e-07!25 | |||
|ontology_enrichment_celltype_v019=CL:0000236;7.72e-10;13!CL:0000945;1.58e-09;24!CL:0000540;5.61e-08;6!CL:0000404;5.61e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,5.12e-10,8;CL:0000945,1.65e-09,24;CL:0000826,1.65e-09,24;CL:0000236,4.46e-09,14;CL:0000540,5.09e-08,6;CL:0000031,5.09e-08,6;CL:0000404,5.09e-08,6 | |||
|ontology_enrichment_development_v019=UBERON:0009117;3.49e-08;10!UBERON:0005564;3.49e-08;10!CL:0000031;5.61e-08;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!4.97e-19!94;UBERON:0001016!4.97e-19!94;UBERON:0001017!1.32e-18!82;UBERON:0005743!3.13e-18!86;UBERON:0000956!3.81e-17!25;UBERON:0000203!3.81e-17!25;UBERON:0001893!1.02e-16!34;UBERON:0001869!1.22e-16!32;UBERON:0002791!8.35e-16!33;UBERON:0002780!1.84e-15!41;UBERON:0001890!1.84e-15!41;UBERON:0006240!1.84e-15!41;UBERON:0002020!2.02e-15!34;UBERON:0003528!2.02e-15!34;UBERON:0003080!6.27e-15!42;UBERON:0000955!1.60e-14!69;UBERON:0006238!1.60e-14!69;UBERON:0002619!2.10e-14!22;UBERON:0001049!3.32e-13!57;UBERON:0005068!3.32e-13!57;UBERON:0006241!3.32e-13!57;UBERON:0007135!3.32e-13!57;UBERON:0002616!1.71e-12!59;UBERON:0001950!3.14e-12!20;UBERON:0003056!3.66e-11!61;UBERON:0003075!5.49e-10!86;UBERON:0007284!5.49e-10!86;UBERON:0002346!7.37e-10!90;UBERON:0007023!5.01e-09!115;UBERON:0000924!1.08e-07!173;UBERON:0006601!1.08e-07!173;UBERON:0004121!1.15e-07!169;UBERON:0000153!5.30e-07!129;UBERON:0007811!5.30e-07!129;UBERON:0000473!6.86e-07!8 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0.136874425072884,0.125542639594803,0,0,0,0,0,0,0,0,0,0.154934401160603,1.84820002233648,0.293600439334847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.13365111283254,0,0.574752439954483,0.661044872784862,0,2.27685187643779,2.34894875748376,3.82273228125229,1.32171328579026,0.560508562981536,0,0,0,0.411202997999018,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0.72038491523742,0,0,0,0,0,0,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.609868530647977,0.795178609928912,0.348581828608555,0.829288440122964,0.756962552626885,1.45990943630332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30139853857622,1.54657762555539,0,1.91381625495949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.359744915166629,0.54907405947211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,1.67222857613147,2.45257662059956,0,0.637705090915289,0,0.191505370132367,0,1.62310970137278,1.68478306868075,0,0,0,0,0,0,0,0,0.921722292925374,0.894704431569664,2.33588798396672,0,0,0,0.540911356951966,0,0,0,0,0.121360521749513,0,0,0,0,0,0,0.281338832821026,0.111308705022906,0,0,0.398495976502139,0,0,0,0,0,0,0,0,0,0,0,0.969332746095218,0,1.99613798001194,0,0,0,0,0,0,0,0,0.694499979733169,0,0.120596438625408,0,0.110579259931225,0,0.87754158861589,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,19.7795123057731,0.166211681900156,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,3.97894590119637,0,2.1045278718029,0.829505531177977,0,0.661983911750998,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451961481561065,0,0.19871461170299,0.0633107959558787,0,0,0,0,0,0.458146384663663,0,0,0.248505071130865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.423366660328922,0.795229689809303,0.544813624446302,2.25054407851027,0.550157746388935,0.83088067605837,0,0,0.303747783290123,0,0,0.157363764404994,0.211200673038813,0,0,0,0,0,0,0,0,2.39460383124975,2.21649806023215,0,0,0,0,0.646414781807753,0,0,0,0,0,0,0.496166021811951,0,1.33971858218986,0,0,0,0,0,0,0.886068179966986,0.610131324509816,0,0,0.221858103073705,0,1.10678907948985,0.124980407962107,0,0,0,0,2.75349954360568,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0.853533837553127,0,0,0,0,0,4.73209173823511,0.970423302570136,0,6.98941684428889,0,0,0.123935764259002,0,0,2.68129933004261,0.80057074828547,0,0,0.128458450192919,0,0,0.41023272848151,2.7727886584389,0.276629009856872,0.161475645631851,0,0,0,0,0,0,0.690359926060101,0,0,0,0,0,0,0,0.270150338473579,0,0.620060389503552,0.126831620387814,3.28184885410932,0,0.992422356778588,0,0,0,0,0,0.682986574053893,0.0887023701626388,0.115233987555779,0,0.135939465953663,0.131545547125698,0,0,1.72684804271131,0,0,0.913158720509496,0,0,0.142953088353313,0.790068058663633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118920090777569,0.90356865631168,2.08886981816315,0,0,0.655678681511872,5.17349025997675,0,0,0,0,0,0,0.469919589899268,0.773494655682926,0,0,0,0,0,0,0,0,0.271965960763659,5.23620828408453,0,0,0,0,2.52332849670158,1.09265571963696,0,0.917899467677836,0.26721740526556,2.94063678511504,0.250707539292375,1.89446745545599,1.33982065078089,0,0.103432995861895,0,0,0.387533459016037,0.993195428733726,0,0,0,0,0,0.202056159043763,0,0,0,0,0,0,0,0,0,1.33151354837103,0.201273793591026,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0.136874425072884,0.125542639594803,0,0,0,0,0,0,0,0,0,0.154934401160603,1.84820002233648,0.293600439334847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.13365111283254,0,0.574752439954483,0.661044872784862,0,2.27685187643779,2.34894875748376,3.82273228125229,1.32171328579026,0.560508562981536,0,0,0,0.411202997999018,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0.72038491523742,0,0,0,0,0,0,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.609868530647977,0.795178609928912,0.348581828608555,0.829288440122964,0.756962552626885,1.45990943630332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30139853857622,1.54657762555539,0,1.91381625495949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.359744915166629,0.54907405947211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,1.67222857613147,2.45257662059956,0,0.637705090915289,0,0.191505370132367,0,1.62310970137278,1.68478306868075,0,0,0,0,0,0,0,0,0.921722292925374,0.894704431569664,2.33588798396672,0,0,0,0.540911356951966,0,0,0,0,0.121360521749513,0,0,0,0,0,0,0.281338832821026,0.111308705022906,0,0,0.398495976502139,0,0,0,0,0,0,0,0,0,0,0,0.969332746095218,0,1.99613798001194,0,0,0,0,0,0,0,0,0.694499979733169,0,0.120596438625408,0,0.110579259931225,0,0.87754158861589,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,19.7795123057731,0.166211681900156,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,3.97894590119637,0,2.1045278718029,0.829505531177977,0,0.661983911750998,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451961481561065,0,0.19871461170299,0.0633107959558787,0,0,0,0,0,0.458146384663663,0,0,0.248505071130865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.423366660328922,0.795229689809303,0.544813624446302,2.25054407851027,0.550157746388935,0.83088067605837,0,0,0.303747783290123,0,0,0.157363764404994,0.211200673038813,0,0,0,0,0,0,0,0,2.39460383124975,2.21649806023215,0,0,0,0,0.646414781807753,0,0,0,0,0,0,0.496166021811951,0,1.33971858218986,0,0,0,0,0,0,0.886068179966986,0.610131324509816,0,0,0.221858103073705,0,1.10678907948985,0.124980407962107,0,0,0,0,2.75349954360568,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0.853533837553127,0,0,0,0,0,4.73209173823511,0.970423302570136,0,6.98941684428889,0,0,0.123935764259002,0,0,2.68129933004261,0.80057074828547,0,0,0.128458450192919,0,0,0.41023272848151,2.7727886584389,0.276629009856872,0.161475645631851,0,0,0,0,0,0,0.690359926060101,0,0,0,0,0,0,0,0.270150338473579,0,0.620060389503552,0.126831620387814,3.28184885410932,0,0.992422356778588,0,0,0,0,0,0.682986574053893,0.0887023701626388,0.115233987555779,0,0.135939465953663,0.131545547125698,0,0,1.72684804271131,0,0,0.913158720509496,0,0,0.142953088353313,0.790068058663633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118920090777569,0.90356865631168,2.08886981816315,0,0,0.655678681511872,5.17349025997675,0,0,0,0,0,0,0.469919589899268,0.773494655682926,0,0,0,0,0,0,0,0,0.271965960763659,5.23620828408453,0,0,0,0,2.52332849670158,1.09265571963696,0,0.917899467677836,0.26721740526556,2.94063678511504,0.250707539292375,1.89446745545599,1.33982065078089,0,0.103432995861895,0,0,0.387533459016037,0.993195428733726,0,0,0,0,0,0.202056159043763,0,0,0,0,0,0,0,0,0,1.33151354837103,0.201273793591026,0 | ||
|short_description=p3@BEND4 | |||
}} | }} |
Latest revision as of 20:10, 17 September 2015
Short description: | p3@BEND4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_BEND4_5end |
Coexpression cluster: | C4414_chronic_smallcell_neuroblastoma_testis_iPS_testicular_acute |
Association with transcript: | 95bp_to_uc011byy.1_5end |
EntrezGene: | BEND4 |
HGNC: | 23815 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 5.12e-10 | 8 |
lymphocyte of B lineage | 1.65e-09 | 24 |
pro-B cell | 1.65e-09 | 24 |
B cell | 4.46e-09 | 14 |
neuron | 5.09e-08 | 6 |
neuroblast | 5.09e-08 | 6 |
electrically signaling cell | 5.09e-08 | 6 |