FFCP PHASE1:Hg19::chr5:148810283..148810287,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr5:148810283..148810287,+ to FFCP PHASE1:Hg19::chr5:148810283..148810287,+: NSchange) |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=406937 | |EntrezGene=406937 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=31532 | |HGNC=31532 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=74bp_to_NR_029686_5end | |||
|cluster_id=chr5:148810283..148810287,+ | |||
|coexpression_cluster_id=C4477 | |||
|description=CAGE_peak_1_at_MIR145_5end | |||
|id=chr5:148810283..148810287,+ | |||
|ontology_enrichment_celltype=CL:0000057!5.65e-13!75;CL:0002620!7.07e-13!23;CL:0000055!1.95e-07!180 | |||
|ontology_enrichment_celltype_v019=CL:0002620;1.97e-13;23!CL:0002617;1.31e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002620,2.16e-13,23;CL:0002617,1.26e-07,2;CL:0000136,2.05e-07,15;CL:0000057,6.59e-07,76 | |||
|ontology_enrichment_development_v019=UBERON:0007297;1.52e-08;2 | |||
|ontology_enrichment_disease=DOID:17!9.32e-07!5;DOID:450!9.32e-07!5;DOID:66!9.32e-07!5;DOID:423!9.32e-07!5;DOID:0080000!9.32e-07!5;DOID:11722!9.32e-07!5 | |||
|ontology_enrichment_disease_v019=DOID:17;2.49e-11;5!DOID:450;2.49e-11;5!DOID:66;2.49e-11;5!DOID:423;2.49e-11;5!DOID:0080000;2.49e-11;5!DOID:11722;2.49e-11;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,3.66e-11,5;DOID:450,3.66e-11,5;DOID:66,3.66e-11,5;DOID:423,3.66e-11,5;DOID:0080000,3.66e-11,5;DOID:11722,3.66e-11,5 | |||
|ontology_enrichment_uberon=UBERON:0007023!4.11e-24!115;UBERON:0000475!4.46e-10!365;UBERON:0000062!3.98e-09!511;UBERON:0000468!6.92e-08!659;UBERON:0002097!9.98e-08!40;UBERON:0001893!3.41e-07!34;UBERON:0003102!3.73e-07!95;UBERON:0000955!8.11e-07!69;UBERON:0006238!8.11e-07!69 | |||
|ontology_enrichment_uberon_v019=UBERON:0003688;1.88e-09;6!UBERON:0002358;1.88e-09;6!UBERON:0003684;1.88e-09;6!UBERON:0001178;1.88e-09;6!UBERON:0005904;9.95e-09;4!UBERON:0005409;6.81e-07;22!UBERON:0000160;8.50e-07;17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,2.95e-09,6;UBERON:0002358,2.95e-09,6;UBERON:0003684,2.95e-09,6;UBERON:0001178,2.95e-09,6;UBERON:0005904,6.98e-09,4;UBERON:0002097,4.50e-08,41;UBERON:0007023,1.03e-07,114;UBERON:0002199,5.81e-07,46;UBERON:0002416,5.81e-07,46;UBERON:0000160,7.86e-07,17 | |||
|phase1_expression=1.09007027562334,1.49870366723688,0.845726424575827,1.0007329835313,1.34088328328186,2.61701557230111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.502170558379211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0.144846518960824,0,0,0,0,0,0.72038491523742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.379891534993739,0.264818361626438,0,0,0.560677600142307,0,0,0.311211035399766,0.67355336034844,0,0.302714855289863,0,0,0,0,0,0.117434498643765,0.161872944368132,0,0,0.245668634623536,0,0,0.989067717114227,0,0,0.336672227908132,0.125118519871964,0,1.31693286264251,0.612975591598039,0.45071417671979,0.113432183160021,2.33206526395521,1.06778694409284,1.05965950579781,2.70081986475962,0.515262646192195,3.60696756063881,1.67505170698431,3.20675031258406,1.07180705677318,3.28163906517349,0.368199594569197,0.161646056818812,2.84007674013291,0.604512589365842,0.339121184620975,0,0,0,0,0,0,0,0,0,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.845302752556,0.797814349754612,3.12022310734098,0.257207374262142,0,0,0.285955987316295,0,0,0.325736184293735,0,0,0,0,0,0,0,0,0.718874566474748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03985430765404,0.356857977594324,0.473107245101804,0.234282829985426,0,0,1.03473071292505,1.32845119707087,0,0.260650843404249,0,0,0,0,0,0,0,0,0.496215615637554,2.60885354589706,0.841980283299221,0,2.04682899626681,2.2519548960105,0,0,0,0.164254312027618,0,0,0,0,0,0,0.182091168006717,0.393373244878272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082509499920588,0,0,1.6068392984416,0,0,0.614014698904518,0.137836572484531,0.429680979473094,0,0.170453254832202,0.0890320356467374,0,0,0,0,0,0.94443704049192,0,0,0,0,0,0.143124886741991,0,0.316379424718726,0,0,0,0,0,0.179872457583315,0.54907405947211,0.235624804691373,0,0,0,0,0,0,0.545999645631943,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0.35667105148125,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0.140669416410513,0,0,0,3.58646378851925,0.828851746593443,0,0,0,1.24415835064723,0,0,0,2.86065876347107,0,0,1.93866549219044,0,0,0,0,0.724999575434793,0,0,0,0,0,0.694499979733169,0,0.120596438625408,0,0,0.295547618953547,0,0,0,3.00106008164809,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.98104772431402,1.59223616106011,3.05515072466813,0,0,0,0.067401132980677,0.802577647298789,0,0,0,0,0.789168805698781,7.25944296291983,0,0.442306057399416,0,0,0,0,0,0,0,0,0,0,0,2.97035336011451,0,0,0,0,2.61870344518732,0,0.451961481561065,0,0,0.0633107959558787,0,0,2.13452994739353,0,0,0,0,0,0,0,0,0,0,0.288950589901519,0,0.273810757783986,0,0,0,0.837847203816763,11.6871816245959,0.717873024576814,0.599037001496973,0.429226048136571,0,0.134366944973453,1.44119953416961,0,0,0.0824158583811665,0,0,0,0,0.272406812223151,0,0,0,0,0,0.182248669974074,0,0.157611414598396,0,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0.293104467356165,0,0,0.13223260174269,0,0,0,1.88645166119599,0.414239055347196,0,0,0,0,0,0,0,0,0,0.886068179966986,0.122026264901963,0.1251909307065,0,0.332787154610557,0.310482014706917,0,0.124980407962107,0,0,0,0,0,0,0.701139929541673,0,0,0.251567901752575,0,0,0,0,0,0.159296767163702,0,0.155262956876259,0,0,0,0.150257608997218,0.380805212168795,0,0.181848659202559,0,0.464033759878494,1.19428766609585,0,0.686791410365586,1.01024846629776,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0.567515953566836,0,0,0,0,0,0,0,0,0,0,0,0.954013051960256,0,0,0,0,0.128458450192919,0,0,0,0,0.0691572524642179,0.161475645631851,0,0,0,0,0,0.381382095467167,0,0.198916222116275,1.0529445968896,0,0,0,0,0,0.270150338473579,0.781078098613847,0,0.126831620387814,0,0,27.7878259898005,0,0,0,0,0,0,0.0887023701626388,0,0,0.0679697329768317,0.131545547125698,0,0,1.56986185701028,0.157115589916002,0,7.30526976407596,0,0,1.78691360441641,0.158013611732727,0,0,0,0,0.17071847709395,0,0,0,0,9.31451510420044,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0.694567422971502,2.40415516554353,0,15.68949259225,0,0,0,0,0.339854229375634,0.0939839179798536,0.515663103788617,0,0,0,0,2.19100916473955,1.83491713361816,0.430018749454354,0,0.135982980381829,0,6.87734892670021,0,0.924351257262837,0.432626562123789,0,0,0.126698501011437,0,0,0,0,0.303114792872958,0.535928260312357,0,0.20686599172379,1.27940389140589,0.23806443146374,0,0.0620747142958579,0,0,1.41482032270754,1.08858373948481,0,0.0673520530145875,0.502055437748735,0,0,0,0,0,9.38563769613817,3.66724332548599,4.88275413978886,0,0.201273793591026,0 | |phase1_expression=1.09007027562334,1.49870366723688,0.845726424575827,1.0007329835313,1.34088328328186,2.61701557230111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.502170558379211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0.144846518960824,0,0,0,0,0,0.72038491523742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.379891534993739,0.264818361626438,0,0,0.560677600142307,0,0,0.311211035399766,0.67355336034844,0,0.302714855289863,0,0,0,0,0,0.117434498643765,0.161872944368132,0,0,0.245668634623536,0,0,0.989067717114227,0,0,0.336672227908132,0.125118519871964,0,1.31693286264251,0.612975591598039,0.45071417671979,0.113432183160021,2.33206526395521,1.06778694409284,1.05965950579781,2.70081986475962,0.515262646192195,3.60696756063881,1.67505170698431,3.20675031258406,1.07180705677318,3.28163906517349,0.368199594569197,0.161646056818812,2.84007674013291,0.604512589365842,0.339121184620975,0,0,0,0,0,0,0,0,0,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.845302752556,0.797814349754612,3.12022310734098,0.257207374262142,0,0,0.285955987316295,0,0,0.325736184293735,0,0,0,0,0,0,0,0,0.718874566474748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03985430765404,0.356857977594324,0.473107245101804,0.234282829985426,0,0,1.03473071292505,1.32845119707087,0,0.260650843404249,0,0,0,0,0,0,0,0,0.496215615637554,2.60885354589706,0.841980283299221,0,2.04682899626681,2.2519548960105,0,0,0,0.164254312027618,0,0,0,0,0,0,0.182091168006717,0.393373244878272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082509499920588,0,0,1.6068392984416,0,0,0.614014698904518,0.137836572484531,0.429680979473094,0,0.170453254832202,0.0890320356467374,0,0,0,0,0,0.94443704049192,0,0,0,0,0,0.143124886741991,0,0.316379424718726,0,0,0,0,0,0.179872457583315,0.54907405947211,0.235624804691373,0,0,0,0,0,0,0.545999645631943,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0.35667105148125,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0.140669416410513,0,0,0,3.58646378851925,0.828851746593443,0,0,0,1.24415835064723,0,0,0,2.86065876347107,0,0,1.93866549219044,0,0,0,0,0.724999575434793,0,0,0,0,0,0.694499979733169,0,0.120596438625408,0,0,0.295547618953547,0,0,0,3.00106008164809,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.98104772431402,1.59223616106011,3.05515072466813,0,0,0,0.067401132980677,0.802577647298789,0,0,0,0,0.789168805698781,7.25944296291983,0,0.442306057399416,0,0,0,0,0,0,0,0,0,0,0,2.97035336011451,0,0,0,0,2.61870344518732,0,0.451961481561065,0,0,0.0633107959558787,0,0,2.13452994739353,0,0,0,0,0,0,0,0,0,0,0.288950589901519,0,0.273810757783986,0,0,0,0.837847203816763,11.6871816245959,0.717873024576814,0.599037001496973,0.429226048136571,0,0.134366944973453,1.44119953416961,0,0,0.0824158583811665,0,0,0,0,0.272406812223151,0,0,0,0,0,0.182248669974074,0,0.157611414598396,0,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0.293104467356165,0,0,0.13223260174269,0,0,0,1.88645166119599,0.414239055347196,0,0,0,0,0,0,0,0,0,0.886068179966986,0.122026264901963,0.1251909307065,0,0.332787154610557,0.310482014706917,0,0.124980407962107,0,0,0,0,0,0,0.701139929541673,0,0,0.251567901752575,0,0,0,0,0,0.159296767163702,0,0.155262956876259,0,0,0,0.150257608997218,0.380805212168795,0,0.181848659202559,0,0.464033759878494,1.19428766609585,0,0.686791410365586,1.01024846629776,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0.567515953566836,0,0,0,0,0,0,0,0,0,0,0,0.954013051960256,0,0,0,0,0.128458450192919,0,0,0,0,0.0691572524642179,0.161475645631851,0,0,0,0,0,0.381382095467167,0,0.198916222116275,1.0529445968896,0,0,0,0,0,0.270150338473579,0.781078098613847,0,0.126831620387814,0,0,27.7878259898005,0,0,0,0,0,0,0.0887023701626388,0,0,0.0679697329768317,0.131545547125698,0,0,1.56986185701028,0.157115589916002,0,7.30526976407596,0,0,1.78691360441641,0.158013611732727,0,0,0,0,0.17071847709395,0,0,0,0,9.31451510420044,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0.694567422971502,2.40415516554353,0,15.68949259225,0,0,0,0,0.339854229375634,0.0939839179798536,0.515663103788617,0,0,0,0,2.19100916473955,1.83491713361816,0.430018749454354,0,0.135982980381829,0,6.87734892670021,0,0.924351257262837,0.432626562123789,0,0,0.126698501011437,0,0,0,0,0.303114792872958,0.535928260312357,0,0.20686599172379,1.27940389140589,0.23806443146374,0,0.0620747142958579,0,0,1.41482032270754,1.08858373948481,0,0.0673520530145875,0.502055437748735,0,0,0,0,0,9.38563769613817,3.66724332548599,4.88275413978886,0,0.201273793591026,0 | ||
|short_description=p1@MIR145 | |||
}} | }} |
Latest revision as of 01:39, 16 September 2015
Short description: | p1@MIR145 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_MIR145_5end |
Coexpression cluster: | C4477_penis_smooth_heart_seminal_temporal_umbilical_colon |
Association with transcript: | 74bp_to_NR_029686_5end |
EntrezGene: | MIR145 |
HGNC: | 31532 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin fibroblast | 2.16e-13 | 23 |
adipocyte of breast | 1.26e-07 | 2 |
fat cell | 2.05e-07 | 15 |
fibroblast | 6.59e-07 | 76 |
Ontology term | p-value | n |
---|---|---|
omentum | 2.95e-09 | 6 |
peritoneum | 2.95e-09 | 6 |
abdominal cavity | 2.95e-09 | 6 |
visceral peritoneum | 2.95e-09 | 6 |
duct of male reproductive system | 6.98e-09 | 4 |
skin of body | 4.50e-08 | 41 |
adult organism | 1.03e-07 | 114 |
integument | 5.81e-07 | 46 |
integumental system | 5.81e-07 | 46 |
intestine | 7.86e-07 | 17 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 3.66e-11 | 5 |
myotonic disease | 3.66e-11 | 5 |
muscle tissue disease | 3.66e-11 | 5 |
myopathy | 3.66e-11 | 5 |
muscular disease | 3.66e-11 | 5 |
myotonic dystrophy | 3.66e-11 | 5 |