FFCP PHASE1:Hg19::chr5:168727914..168727925,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr5:168727914..168727925,- to FFCP PHASE1:Hg19::chr5:168727914..168727925,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6586 | |EntrezGene=6586 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11087 | |HGNC=11087 | ||
|TSSclassifier=strong | |||
|UniProt=O75094 | |UniProt=O75094 | ||
|association_with_transcript=-128bp_to_ENST00000332966_5end | |||
|cluster_id=chr5:168727914..168727925,- | |||
|coexpression_cluster_id=C859 | |||
|description=CAGE_peak_7_at_SLIT3_5end | |||
|id=chr5:168727914..168727925,- | |||
|ontology_enrichment_celltype=CL:0000057!2.39e-17!75;CL:0000055!7.13e-14!180;CL:0002620!1.16e-09!23;CL:0000136!6.89e-08!15 | |||
|ontology_enrichment_celltype_v019=CL:0002620;1.14e-13;23!CL:1000306;8.05e-10;4!CL:0002547;8.05e-10;4!CL:0000057;2.49e-09;73!CL:0002334;2.99e-09;12!CL:0002580;1.83e-08;3!CL:0002579;9.65e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,4.04e-25,76;CL:0002620,5.24e-14,23;CL:1000306,1.32e-09,4;CL:0002547,1.32e-09,4;CL:0002334,2.81e-09,12;CL:0002580,1.90e-08,3;CL:0002579,8.42e-08,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:17;2.06e-11;5!DOID:450;2.06e-11;5!DOID:66;2.06e-11;5!DOID:423;2.06e-11;5!DOID:0080000;2.06e-11;5!DOID:11722;2.06e-11;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,9.23e-12,5;DOID:450,9.23e-12,5;DOID:66,9.23e-12,5;DOID:423,9.23e-12,5;DOID:0080000,9.23e-12,5;DOID:11722,9.23e-12,5 | |||
|ontology_enrichment_uberon=UBERON:0000475!5.77e-11!365;UBERON:0007023!1.89e-08!115;UBERON:0002199!2.39e-08!45;UBERON:0002416!2.39e-08!45;UBERON:0002097!7.35e-08!40;UBERON:0000948!4.14e-07!24;UBERON:0005498!4.14e-07!24;UBERON:0004140!4.14e-07!24;UBERON:0009881!4.14e-07!24;UBERON:0004141!4.14e-07!24;UBERON:0003084!4.14e-07!24;UBERON:0007005!4.14e-07!24;UBERON:0004139!4.14e-07!24;UBERON:0004291!4.14e-07!24;UBERON:0007100!5.44e-07!27 | |||
|ontology_enrichment_uberon_v019=UBERON:0004457;3.31e-15;9!UBERON:0000042;3.31e-15;9!UBERON:0003688;9.62e-13;6!UBERON:0002358;9.62e-13;6!UBERON:0003684;9.62e-13;6!UBERON:0001178;9.62e-13;6!UBERON:0004797;8.05e-10;4!UBERON:0000415;8.05e-10;4!UBERON:0007240;8.05e-10;4!UBERON:0005742;8.05e-10;4!UBERON:0005734;8.05e-10;4!UBERON:0004664;8.05e-10;4!UBERON:0004663;8.05e-10;4!UBERON:0002199;1.03e-07;46!UBERON:0002416;1.03e-07;46!UBERON:0002097;1.59e-07;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,8.81e-13,6;UBERON:0002358,8.81e-13,6;UBERON:0003684,8.81e-13,6;UBERON:0001178,8.81e-13,6;UBERON:0004457,5.02e-11,12;UBERON:0000042,5.02e-11,12;UBERON:0002097,3.95e-10,41;UBERON:0002199,7.09e-10,46;UBERON:0002416,7.09e-10,46;UBERON:0000415,1.32e-09,4;UBERON:0007240,1.32e-09,4;UBERON:0005742,1.32e-09,4;UBERON:0005734,1.32e-09,4;UBERON:0004664,1.32e-09,4;UBERON:0004663,1.32e-09,4 | |||
|phase1_expression=1.2717486548939,0.856402095563933,1.83240725324762,1.0007329835313,1.34088328328186,0.872338524100369,0,0.631719873426831,2.08948502559871,0,0,0,0.263766978228454,0,0,0,0,0,0,0.123121058076788,0.612002073732759,1.25381888591235,0.286235987131057,0.410623275218653,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,1.2786256184353,0,0,0.289693037921647,0,0,0.283604451492204,0.221729397462564,0.087834785693126,0.392937226493138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.48485975847659,2.40597972162702,3.31022952033047,14.9155042789383,1.06400514659507,3.92474320099615,0,0.98667019366864,2.48968828319813,0.134710672069688,0,0,0,1.17160715916898,0.312160076830321,0,0.149448680551801,0.23486899728753,0.647491777472526,0.140450806702248,0.204154171254893,0.122834317311768,0.309977343527296,0,0.494533858557114,0,0,0.168336113954066,0.250237039743928,0.554128230968366,0,0.30648779579902,0,0.113432183160021,3.04962380671065,5.55249210928275,2.96704661623387,1.80054657650641,1.44273540933814,2.31876486041066,1.11670113798954,2.86919764810153,1.75386609290158,1.7670364197088,3.58994604704967,5.17267381820198,2.4850671476163,0.503760491138201,0.339121184620975,0,0,0,0,0,0,0,0,0.36497735907583,0,3.21620469096443,0,1.39310378409594,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,1.2347220339942,1.47008711385542,0,0,0,0,0,0.171567810298526,0.219500570817251,1.1240175325762,0,0,1.3032332212413,1.03993478527958,0,0.695582429850461,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0.179117045405697,0,0.383382679165211,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0,0,0.07333828582095,0.517086863031111,0,0,0,0,0,0,0,0.142977993658148,0.542621605391443,0,0,0,0,6.33022691825131,0.871533458600294,4.69873058555668,0,0,0,0,0,0,0,0.410952645100767,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24538298343828,0,0.271265023699736,0.207970861530807,0.178428988797162,0.157702415033935,0.234282829985426,0.601892199455438,0,0,0.664225598535437,0.184369168541703,0.347534457872331,0.391602314925481,0.343143423810856,0,0,0,0,0,0.30239029332968,5.95458738765064,5.06424511850606,5.05188169979532,4.86928767171664,4.60536524160033,1.44768529029247,7.42090332224955,0,0.887808626565635,0.246381468041427,0,0.581051892299796,0,0,0.368323955743585,0,0,0,0,0,0,1.46139224653261,0,0,0,0.215915916102139,0,0,1.00337954770971,0,0,0.447749509444357,0,0,0.256450125116389,2.95213181129735,0.976135183992909,0.103041011647722,0.640986253728404,0.660075999364704,0.574265537996172,0.650060246036521,0,0.290012154876366,0,0.15350367472613,0,0.107420244868274,0.435050081742686,0,0.356128142586949,0.661139661443912,0.768760269460425,0.382838137483752,1.11273558941105,0,4.09256050879832,2.0911118104818,0.616067160352178,2.12922412126809,0,1.48259375283136,0.572499546967965,0,0,0,0.511795582622668,0.42793898803392,0.95460974377781,0,0.179872457583315,0.274537029736055,0.117812402345686,0.202182481573316,1.58510321173008,0.421258456238981,0,0.487426979262569,0,0,0,0,2.2054613741845,0,0.438450885253763,0,0,0.405820753925408,0.6196469961995,0.281695602532241,0.286822704408103,0.196498082026242,0.7133421029625,0,6.75544432952525,7.24448764511784,0.379473173765715,0.349934720244983,0.288666338176536,0,0,0.376575203107117,0,0,0.443430153536676,0.229723400206959,0,0,0,0.238231775457789,0.411362273086194,0,0,0,0.213648142254946,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.90460633053462,0,0,0,0.23874448473769,0,0,0,0.281338832821026,0,0,2.32237948940793,0.996239941255349,0,0,0,0,0.622079175323615,0,0,0,1.1837208676432,0,0,0,0.278304294485554,0,0,0.0874599999961957,0.724999575434793,0,0,0,0,0,0,0,0,1.52581736317083,2.10100593869327,0.295547618953547,0,0,0.697118721393016,1.23120413606075,0.341826167541004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265372693510018,0.611030144933625,0,0,0,0.202203398942031,0,0.234264445725339,0,0,0,0.394584402849391,1.20990716048664,0,0.379119477770928,0,0,0,0,0,0,0.569219092059585,0,0,0,0,1.04836000945218,0,0,0,0,0.872901148395775,0,0.90392296312213,0,0,0.0633107959558787,0,0.320635281006135,1.70762395791482,0,0,0,0,0,0,0,0,0,0,0.866851769704557,0,0,0,0,0,0.558564802544508,0.687481272035051,0.717873024576814,0.199679000498991,0,0.446342914883745,0.671834724867263,0.720599767084807,1.16495949527454,0,0,0,0,0,0.795229689809303,0.408610218334727,0,0.137539436597234,0,0,0,0.182248669974074,0,0.394028536495991,1.25891011523995,0,0,0.383830394638891,1.42939065274673,0.662091970365432,0,0.542999601753713,0.864221491201268,1.30634944043764,0,0,0.851940108927109,0,0,0,0,0,0,0,0.533937062838473,0.943225830597996,1.24271716604159,0.496166021811951,0,0,0,0.544017803369474,0.2506898940227,0.919036730290385,0.655745261419609,0.628216385000937,0,0.244052529803926,0.3755727921195,0,0,0.310482014706917,0.138348634936231,1.49976489554528,0,0.285465333544967,0.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| ||
|short_description=p7@SLIT3 | |||
}} | }} |
Latest revision as of 20:29, 16 September 2015
Short description: | p7@SLIT3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_SLIT3_5end |
Coexpression cluster: | C859_Fibroblast_Synoviocyte_Preadipocyte_mesothelioma_tenocyte_Mesothelial_Smooth |
Association with transcript: | -128bp_to_ENST00000332966_5end |
EntrezGene: | SLIT3 |
HGNC: | 11087 |
UniProt: | O75094 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 4.04e-25 | 76 |
skin fibroblast | 5.24e-14 | 23 |
fibroblast of tunica adventitia of artery | 1.32e-09 | 4 |
fibroblast of the aortic adventitia | 1.32e-09 | 4 |
preadipocyte | 2.81e-09 | 12 |
preadipocyte of the breast | 1.90e-08 | 3 |
omentum preadipocyte | 8.42e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
omentum | 8.81e-13 | 6 |
peritoneum | 8.81e-13 | 6 |
abdominal cavity | 8.81e-13 | 6 |
visceral peritoneum | 8.81e-13 | 6 |
cavity lining | 5.02e-11 | 12 |
serous membrane | 5.02e-11 | 12 |
skin of body | 3.95e-10 | 41 |
integument | 7.09e-10 | 46 |
integumental system | 7.09e-10 | 46 |
artery wall | 1.32e-09 | 4 |
tunica adventitia of artery | 1.32e-09 | 4 |
adventitia | 1.32e-09 | 4 |
tunica adventitia of blood vessel | 1.32e-09 | 4 |
aorta tunica adventitia | 1.32e-09 | 4 |
aorta wall | 1.32e-09 | 4 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 9.23e-12 | 5 |
myotonic disease | 9.23e-12 | 5 |
muscle tissue disease | 9.23e-12 | 5 |
myopathy | 9.23e-12 | 5 |
muscular disease | 9.23e-12 | 5 |
myotonic dystrophy | 9.23e-12 | 5 |