FFCP PHASE1:Hg19::chr5:65349876..65349891,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr5:65349876..65349891,+ to FFCP PHASE1:Hg19::chr5:65349876..65349891,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr5:65349876..65349891,+ | |||
|description=CAGE_peak_at_chr5:65349876..65349891,+ | |||
|id=chr5:65349876..65349891,+ | |||
|ontology_enrichment_celltype=CL:0000860!2.57e-08!45;CL:0002057!3.45e-08!42;CL:0002194!5.95e-08!63;CL:0000576!5.95e-08!63;CL:0000040!5.95e-08!63;CL:0000559!5.95e-08!63;CL:0002009!1.96e-07!65;CL:0002087!7.84e-07!119;CL:0000766!9.15e-07!76 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.15e-08;33!CL:0002057;2.15e-08;33!CL:0000473;3.44e-08;39!CL:0000234;3.44e-08;39!CL:0000135;3.02e-07;3!CL:0000388;3.02e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,2.92e-10,48;CL:0000234,2.92e-10,48;CL:0000766,8.41e-09,72;CL:0000860,2.03e-08,42;CL:0002057,2.03e-08,42;CL:0002194,3.03e-08,59;CL:0000576,3.03e-08,59;CL:0000040,3.03e-08,59;CL:0000559,3.03e-08,59;CL:0002009,8.01e-08,61;CL:0000135,2.24e-07,3;CL:0000388,2.24e-07,3;CL:0000839,6.92e-07,66 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0007846;3.02e-07;3!UBERON:0000043;3.02e-07;3!UBERON:0007845;3.02e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007846,2.24e-07,3;UBERON:0000043,2.24e-07,3;UBERON:0007845,2.24e-07,3;UBERON:0003528,5.59e-07,34;UBERON:0002020,5.59e-07,34 | |||
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|phase1_expression=0.54503513781167,0,0.281908808191942,0,0.893922188854576,1.74467704820074,0,0.631719873426831,0,0,0,0.218441372130172,0,0.37129905888014,0.331397375727916,0,0.602694528023977,0,0,0,0,0,0.286235987131057,1.77936752594749,0.502170558379211,0.152826811495903,0.0821005894499457,0.0787107813136792,0,0,0.309632246632152,0,0,0.369754010166788,0.0774672005803016,0.568676929949686,0,0,0.401088894940283,0.434021741431704,0.223915474239924,0,0,0.872389432677388,0.755751887377619,0,1.16214518452842,0.822335776043652,1.85823822537062,0.575384784644301,0,1.41889337933151,1.37898272294647,0.645484683583826,0,2.25890807451126,1.36453075028923,0.674170453335254,1.53041946185451,1.28371610830437,3.83602275479425,0.659702600373432,0.797854630486527,0.426224750532694,6.09439401120026,1.13477044938228,0,0.75374599577023,2.08593167368081,0.65156653411535,1.21079900526674,2.20966581592539,0.949387162322653,1.05627643155971,0.212604299965044,0,0.112328631146495,0.150176892841506,0.16072558669708,1.14005097496499,0.79566670879636,0.730656615058536,0,0,0,0,0,0.574752439954483,0,0,0.569212969109448,0,1.91136614062614,0,0,0.263384084775077,0.983548850569165,0.786021525498329,1.02800749499755,0.167186495390678,0.32592226663359,0.473447805734733,0,0,0.294605907474837,0.443067789167242,1.35401931882508,0.512365278902701,0.390178042679635,1.64437904603676,0,0.289803085735052,1.03800594213442,0.535081656179426,0,0.113309342697566,0.383220493601921,0,0.506039384039006,0,0,0,0.150575119077773,0.511946444617674,0,0.236777252044017,0,0.403213486449465,1.60464117470104,0.289648807765598,0,0.670700859703636,0.12786256184353,0,2.00535164254356,2.02785126545153,0,0,0.756278537312543,0.221729397462564,0.43917392846563,0.130979075497713,0,0,0.649094787309367,0.348259474598534,0.26591592103773,0,0,0.371457501329565,0.198762407366705,0,0,0,0,0,0,0,0,0,0.402829317109147,0,0,0,0,0.357198913136319,0,0.112611480483322,0,0,0.183201743930407,0,3.87780264148325,0,0.993943903390637,0.25326102332916,0,0.286836620748814,0.709336764396714,0,1.06748995729705,0.24666754841716,0,0.134710672069688,0.163461903113459,0,0.576175924479999,0,0,0,0.597794722207204,0,0.161872944368132,0.561803226808994,0,0.491337269247072,0.206651562351531,0,1.23633464639278,0,0,0,1.00094815897571,0,0,0.612975591598039,0.300476117813194,0.340296549480063,0.538168907066586,0.213557388818567,1.69545520927649,0,0.309157587715317,0.515281080091258,0.744467425326359,0.337552664482532,0.194874010322397,1.26216887122057,0.736399189138395,0.161646056818812,0,0.302256294682921,0.508681776931463,0.193260853163297,0.272746120590835,0,0.243947412259191,0.132529768321485,0,0.207322110030741,0,0,0,1.92972281457866,0,1.85747171212792,0.721879481669586,0.236613600079688,0,0,0.330881918197182,0.217879444092406,0.474541238222193,0.269662616320329,0,0,0,0,0,0,0,0.982827216677626,1.18157981336281,0,0.491953754172454,0.343135620597051,0.219500570817251,0,0.402115889646523,0.462942225792648,0,0,0,0.579652024875384,0.234817388471643,0,0,0.380508304469197,0,0,0.492434012174795,0.234004265139238,0.297262324577456,0,0.503946384596579,0.141775097242386,0.626909658919938,0.581267877027924,0,0,0.616339038092582,0,0,0,0.380987365753014,0,0,0,0.308482478109971,0.901029173531752,0.571652865261156,0.112131084345361,0.43596006883328,0.1466765716419,0,0,0,0,1.04007436911366,0,0,0.266422179016099,0.714889968290738,0.542621605391443,0,0,0,0.791951872933429,0.301439377059586,0,0.499864955910285,1.2162378064119,1.00451418286425,8.43335757932127,0.239624855491583,2.29723871668228,0,0.434343920002738,0.410952645100767,0.179060963239896,0.224170287987055,0.394061520403854,1.94064817373566,1.15508732651774,0,0,0.773288812777695,0.167516265334349,1.27587750330633,6.74106321552464,8.97484377612075,0.414415513436035,0.12269149171914,0,0.542530047399471,0.415941723061614,1.60586089917446,0.788512075169673,0.702848489956279,0,0,0,0.664225598535437,0.184369168541703,0.434418072340414,0,0.343143423810856,0.206768026122887,1.72571360654893,0.853820462427555,0,1.66435439510497,0.30239029332968,0,0.153461973288062,0.561320188866147,0.256278298511402,0.511707249066704,0.321707842287215,0,0.462629081407967,0,0.246381468041427,0,0.232420756919918,0.120859449591622,1.00253235151642,1.10497186723076,0.114814448164607,1.0925470080403,1.18011973463482,0.451199612907412,0.462092022626489,0,0,0.422206515571503,0,0,0.647747748306418,0,0,0,0,0,0.223874754722178,0.438519753291869,0.261435451024901,0.256450125116389,0,0.325378394664303,0.412164046590889,0.27470839445503,0.330037999682352,0,0,0,0.193341436584244,0.616194468458578,0.15350367472613,0.137836572484531,0.322260734604821,0.290033387828457,0.426133137080504,0.267096106940212,0.661139661443912,0.192190067365106,0.382838137483752,0.50578890427775,3.253918845081,0.31481234683064,0,0.308033580176089,0,0,0,0.143124886741991,0,0,0.38126038784765,0,1.28381696410176,0,0,0.179872457583315,0,0.353437207037059,0,0,0,0,0.243713489631284,0,0.409499734223957,1.1312434556297,0,0,1.3268779504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| ||
|short_description=p@chr5:65349876..65349891,+ | |||
}} | }} |
Latest revision as of 15:47, 30 July 2015
Short description: | p@chr5:65349876..65349891, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:65349876..65349891, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 2.92e-10 | 48 |
phagocyte | 2.92e-10 | 48 |
myeloid leukocyte | 8.41e-09 | 72 |
classical monocyte | 2.03e-08 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.03e-08 | 42 |
monopoietic cell | 3.03e-08 | 59 |
monocyte | 3.03e-08 | 59 |
monoblast | 3.03e-08 | 59 |
promonocyte | 3.03e-08 | 59 |
macrophage dendritic cell progenitor | 8.01e-08 | 61 |
fibrocyte | 2.24e-07 | 3 |
tendon cell | 2.24e-07 | 3 |
myeloid lineage restricted progenitor cell | 6.92e-07 | 66 |
Ontology term | p-value | n |
---|---|---|
dense regular connective tissue | 2.24e-07 | 3 |
tendon | 2.24e-07 | 3 |
regular connective tissue | 2.24e-07 | 3 |
brain grey matter | 5.59e-07 | 34 |
gray matter | 5.59e-07 | 34 |