FFCP PHASE1:Hg19::chr9:5629708..5629739,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr9:5629708..5629739,- to FFCP PHASE1:Hg19::chr9:5629708..5629739,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=55848 | |EntrezGene=55848 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=23633 | |HGNC=23633 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=331bp_to_uc003zjd.2_5end | |||
|cluster_id=chr9:5629708..5629739,- | |||
|description=CAGE_peak_4_at_C9orf46_5end | |||
|id=chr9:5629708..5629739,- | |||
|ontology_enrichment_celltype=CL:0000945!9.01e-12!24;CL:0000826!9.01e-12!24;CL:0000136!5.59e-08!15 | |||
|ontology_enrichment_celltype_v019=CL:0000945;3.96e-16;24!CL:0000136;7.93e-15;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,2.02e-16,24;CL:0000826,2.02e-16,24;CL:0000136,3.37e-12,15;CL:0002076,5.34e-07,42 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060058;7.88e-07;10 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,7.13e-07,10 | |||
|ontology_enrichment_uberon=UBERON:0003102!3.51e-08!95;UBERON:0000161!9.40e-07!35 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;1.36e-09;9!UBERON:0001557;1.36e-09;9!UBERON:0003688;2.00e-07;6!UBERON:0002358;2.00e-07;6!UBERON:0003684;2.00e-07;6!UBERON:0001178;2.00e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,1.99e-10,9;UBERON:0003688,1.38e-07,6;UBERON:0002358,1.38e-07,6;UBERON:0003684,1.38e-07,6;UBERON:0001178,1.38e-07,6;UBERON:0004457,3.14e-07,12;UBERON:0000042,3.14e-07,12;UBERON:0001557,3.78e-07,19 | |||
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| ||
|short_description=p4@C9orf46 | |||
}} | }} |
Latest revision as of 14:01, 17 September 2015
Short description: | p4@C9orf46 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_C9orf46_5end |
Coexpression cluster: | NA |
Association with transcript: | 331bp_to_uc003zjd.2_5end |
EntrezGene: | C9orf46 |
HGNC: | 23633 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 2.02e-16 | 24 |
pro-B cell | 2.02e-16 | 24 |
fat cell | 3.37e-12 | 15 |
endo-epithelial cell | 5.34e-07 | 42 |
Ontology term | p-value | n |
---|---|---|
larynx | 1.99e-10 | 9 |
omentum | 1.38e-07 | 6 |
peritoneum | 1.38e-07 | 6 |
abdominal cavity | 1.38e-07 | 6 |
visceral peritoneum | 1.38e-07 | 6 |
cavity lining | 3.14e-07 | 12 |
serous membrane | 3.14e-07 | 12 |
upper respiratory tract | 3.78e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 7.13e-07 | 10 |