FFCP PHASE1:Mm9::chr13:14155662..14155703,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr13:14155662..14155703,- to FFCP PHASE1:Mm9::chr13:14155662..14155703,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=14593 | |EntrezGene=14593 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=2821 | |||
|TSSclassifier=NA | |||
|UniProt=Q9WTN0,Q3V0T8 | |UniProt=Q9WTN0,Q3V0T8 | ||
|association_with_transcript=0bp_to_ENSMUST00000170957,NM_010282,uc007pmu.1,uc007pmv.1,uc007pmw.1,uc007pmx.1_5end | |||
|cluster_id=chr13:14155662..14155703,- | |||
|description=CAGE_peak_1_at_Ggps1_5end | |||
|id=chr13:14155662..14155703,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000153!2.13e-10!94;UBERON:0000033!3.67e-10!63;UBERON:0007811!6.15e-09!86;UBERON:0003056!1.24e-07!49;UBERON:0002346!1.51e-07!71;UBERON:0003075!1.51e-07!71;UBERON:0007284!1.51e-07!71;UBERON:0000955!8.21e-07!50;UBERON:0006238!8.21e-07!50 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010314,3.46e-10,92;UBERON:0010371,1.03e-07,73;UBERON:0003056,1.24e-07,49;UBERON:0002346,4.71e-07,64;UBERON:0003075,4.71e-07,64;UBERON:0007284,4.71e-07,64 | |||
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|phase1_expression=23.3817316772999,4.18770489167233,2.72999543633722,2.11724947914781,3.00537437967808,2.85394762250213,4.90586545250604,23.8878148366916,23.7932940436317,11.7032263160997,19.6900663459331,13.1624062342305,36.1233540154844,23.4286678482913,8.66085380720723,15.7930708564064,18.88817070946,33.7544516933314,28.5198021899937,25.0389894560838,18.6244805430843,20.4539359473824,18.0227854505865,5.91971964335605,3.89995777814189,4.59385571292016,1.29228598847722,3.01659725760245,3.99049180858385,4.78857246543868,3.99114919179548,1.90509202037889,2.46025915033828,0,11.2652131702997,9.64160943079256,10.0042984568561,22.600708059793,14.0640362014284,21.4644735029257,17.0587131528994,15.7100461540443,18.4493934151838,16.6183799727762,15.2065396829272,10.2786181210542,3.12956537739216,3.48840250208714,4.17403747195497,8.94377535741704,7.13930750289349,2.87505128729943,28.5230430298152,22.4862264023517,25.2070349356848,9.26133969729409,8.02293631828519,11.3447860301037,15.7806839470486,15.340738398889,10.775133859605,3.38844532069132,3.55717918444456,1.7997994345628,0.988866362566974,2.8419204597844,1.49800055259202,2.68952813725088,15.3460626216547,13.7706057098324,11.567872874326,13.4255962669788,12.8103753751936,15.923803897944,13.2266750005166,11.9498442259303,18.7196997698961,35.2417053115118,39.6304855801108,15.1669230889723,16.0103376304217,18.7528813400434,29.0350318961436,26.449842671489,28.1148775909331,20.0347438122094,25.9116459054367,21.6223357157349,12.0404647399763,8.91744409260069,27.5371264266594,14.6272059086836,3.39985666853875,2.69851595818909,11.0461990966104,9.85659151614138,9.26933172869562,9.03280709663706,8.05336614268893,6.00677276667578,23.0983208433756,7.69958864485907,5.09610479413291,7.11066703153331,13.8554266247177,15.2015919285059,13.6491600153991,8.90634261808668,41.9479371508418,30.7275227864187,15.9606500624845,20.7036525252256,13.3756988408514,23.3620092856565,28.9268219553834,25.1333182659351,20.7643772896874,34.8484450176987,21.230653246797,17.4708197943202,16.3422723660691,16.9706338597328,29.8226817948995,49.1871738979399,47.1255090330274,13.5392239260553,17.8524535513821,14.3976655438418,17.7898317902291,48.6819578065674,36.1425476226715,29.1518096901845,42.5869584471077,44.2387741181472,48.6224024269371,35.5308366118389,23.9322505048243,22.6420686510369,31.843067562643,23.7799297151716,21.5999935318088,24.3696230699481,30.2504378072987,29.086029842293,29.051585137617,32.5408849523518,28.4853242661576,36.7358786449402,24.1436152084783,24.9620025821521,24.2812551346249,20.604398848192,20.5754964426942,20.89512999133,25.311202778177,21.8937693500343,16.1509033082044,13.3820911699652,13.6398479709884,24.6479669317247,23.4526059981096,26.2890609733082,26.5154103855435,21.2505370287196,27.1510118681786,28.3691412595498,23.8763327245661,27.4398554562848,22.8738191379738,32.833492815819,27.2391200074075,26.6083977114105,24.5896129125977,26.707077333314,45.2123389412874,32.929475961371,22.4684772428983,3.96675849995316,18.5560777965654,21.8302471548812,20.4899263502128,21.176770085451,16.9007313322101,18.8323369851434,15.6594590309689,16.3051965176771,20.6094871216221,21.8852119245266,23.7856186285327,11.6846523125049,17.2910439899755,20.5115511451998,16.1217715810119,20.7932292949706,15.7790829942313,21.5870407516033,18.6194387680921,23.565635483147,23.3342821988509,25.241335304512,24.4918015432545,26.2835959153435,11.2651998293117,10.8449318715461,8.84515478009414,13.4917267430912,9.53442570525964,12.0588579876208,9.67578236769395,11.2201493605816,14.4300351829781,9.60964946158285,21.5652309791032,11.1642284300551,13.1055822708115,8.5876818502018,7.89348619496414,12.0610880340842,36.3963784628211,19.3281240005894,22.0002718196735,17.3139987490692,20.6527418493882,21.6083072099942,24.0424077294874,21.0744339686423,28.059055650902,33.2197034473162,28.0640392837177,35.0667493491679,31.428666699593,35.2943702938888,4.52373851817817,2.71952841909355,18.6870423747234,24.0064969285117,50.7339864361423,49.5805434285019,6.88526770582037,17.6729649043061,11.6738041184015,9.76096860741596,12.9254038639679,7.88597033243422,11.5855310522845,9.34152551603147,10.1202675418724,13.151513606009,9.88219444866309,34.7027021735552,26.2589157635297,12.8207234640424,24.7588178217436,28.7048013972212,27.8764790513922,13.352934988524,12.9999129494843,17.3516673375426,8.26845300066164,16.908933136916,29.9776820075137,19.6308213917853,16.0423820273125,25.9150141507369,14.7586052004998,10.3135543248187,46.9806655940227,20.1668425315067,9.44318391614108,21.4337035031592,28.1970971491215,18.1936193954112,23.2014119048991,12.4830629136986,20.8857820176702,24.3606881493393,23.376010193826,16.9832840529724,24.3811284310817,22.0142175987769,21.7257666085708,22.4873032650734,18.0718118710507,45.4291989925749,19.9918930533488,13.8279201535359,20.556592538038,16.3880557594081,15.4464477324758,17.8446975101088,17.677756719361,16.5142713741916,19.0715963850105,20.0480829783174,23.408863525004,25.82157232510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| ||
|short_description=p1@Ggps1 | |||
}} | }} |
Latest revision as of 04:41, 27 September 2015
Short description: | p1@Ggps1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Ggps1_5end |
Coexpression cluster: | MCL_coexpression_mm9:2821 |
Association with transcript: | 0bp_to_ENSMUST00000170957, NM_010282, uc007pmu.1, uc007pmv.1, uc007pmw.1, uc007pmx.1_5end |
EntrezGene: | Ggps1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
structure with developmental contribution from neural crest | 3.46e-10 | 92 |
ecto-epithelium | 1.03e-07 | 73 |
pre-chordal neural plate | 1.24e-07 | 49 |
neurectoderm | 4.71e-07 | 64 |
neural plate | 4.71e-07 | 64 |
presumptive neural plate | 4.71e-07 | 64 |