FFCP PHASE1:Mm9::chr1:89023924..89023949,+: Difference between revisions
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m (moved FFCP PHASE1 mm9::chr1:89023924..89023949,+ to FFCP PHASE1:Mm9::chr1:89023924..89023949,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=74 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr1:89023924..89023949,+ | |||
|description=CAGE_peak_at_chr1:89023924..89023949,+ | |||
|id=chr1:89023924..89023949,+ | |||
|ontology_enrichment_celltype=CL:0000239!1.66e-19!6;CL:0000677!1.66e-19!6;CL:0000212!1.66e-19!6;CL:0000584!1.66e-19!6;CL:0000075!1.20e-16!7;CL:0002563!7.93e-13!9;CL:0002251!7.93e-13!9;CL:0000473!1.02e-10!3;CL:0000627!1.02e-10!3;CL:0000682!1.02e-10!3;CL:0000066!2.18e-09!25;CL:0002076!1.82e-07!15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000682,6.98e-15,3;CL:0000239,3.68e-13,6;CL:0000677,3.68e-13,6;CL:0000584,3.68e-13,6;CL:0000075,2.59e-11,7;CL:0002563,7.70e-09,9;CL:0002251,7.70e-09,9;CL:0000066,9.27e-09,25 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!2.60e-17!43;UBERON:0000344!3.97e-17!15;UBERON:0005409!2.06e-13!59;UBERON:0003350!7.93e-13!9;UBERON:0004808!7.93e-13!9;UBERON:0001277!7.93e-13!9;UBERON:0001242!5.80e-12!13;UBERON:0000060!5.80e-12!13;UBERON:0001262!5.80e-12!13;UBERON:0004786!5.80e-12!13;UBERON:0000485!2.16e-10!11;UBERON:0004923!3.85e-10!24;UBERON:0001962!3.86e-08!2;UBERON:0001961!3.86e-08!2;UBERON:0001744!3.86e-08!2;UBERON:0001155!5.72e-08!2;UBERON:0000059!5.72e-08!2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.38e-21,31;UBERON:0000344,1.28e-15,15;UBERON:0005409,1.22e-13,47;UBERON:0001962,3.90e-11,2;UBERON:0001961,3.90e-11,2;UBERON:0001744,3.90e-11,2;UBERON:0001155,6.92e-11,2;UBERON:0000059,6.92e-11,2;UBERON:0004923,1.68e-09,24;UBERON:0001242,2.01e-09,13;UBERON:0001262,2.01e-09,13;UBERON:0004786,2.01e-09,13;UBERON:0003350,7.70e-09,9;UBERON:0004808,7.70e-09,9;UBERON:0001277,7.70e-09,9;UBERON:0002465,1.05e-07,3;UBERON:0000485,2.93e-07,11 | |||
|phase1_expression=0,0.697950815278722,2.27499619694768,8.77146212789807,1.50268718983904,0.503637815735669,1.16806320297763,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.6394014006791,3.44113921600755,1.72269589234506,1.29228598847722,1.50829862880122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12355536105401,0,0,0,0,0,0,0,0,0,0,0.45673551887624,0,0,0,0,0,0,0,0.502666365318702,0,0,0,0,0,0,1.86391761218122,0,0,7.66371165625774,0,0,0,0,0,0.125654352112864,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,225.676028777934,1.32225283331772,0,0,0,0,0,0,20.8792787079585,0.164698954724011,0,0,0,18.8752075817387,0.864552199498777,21.1089749649629,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.5336759750836,0,0,0,0,0,0,0,0,0,0,0.954670618015114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0.697950815278722,2.27499619694768,8.77146212789807,1.50268718983904,0.503637815735669,1.16806320297763,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.6394014006791,3.44113921600755,1.72269589234506,1.29228598847722,1.50829862880122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12355536105401,0,0,0,0,0,0,0,0,0,0,0.45673551887624,0,0,0,0,0,0,0,0.502666365318702,0,0,0,0,0,0,1.86391761218122,0,0,7.66371165625774,0,0,0,0,0,0.125654352112864,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,225.676028777934,1.32225283331772,0,0,0,0,0,0,20.8792787079585,0.164698954724011,0,0,0,18.8752075817387,0.864552199498777,21.1089749649629,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.5336759750836,0,0,0,0,0,0,0,0,0,0,0.954670618015114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr1:89023924..89023949,+ | |||
}} | }} |
Latest revision as of 03:39, 6 August 2015
Short description: | p@chr1:89023924..89023949, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:89023924..89023949, + |
Coexpression cluster: | MCL_coexpression_mm9:74 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
M cell of gut | 6.98e-15 | 3 |
brush border epithelial cell | 3.68e-13 | 6 |
gut absorptive cell | 3.68e-13 | 6 |
enterocyte | 3.68e-13 | 6 |
columnar/cuboidal epithelial cell | 2.59e-11 | 7 |
intestinal epithelial cell | 7.70e-09 | 9 |
epithelial cell of alimentary canal | 7.70e-09 | 9 |
epithelial cell | 9.27e-09 | 25 |
Ontology term | p-value | n |
---|---|---|
intestine | 1.38e-21 | 31 |
mucosa | 1.28e-15 | 15 |
gastrointestinal system | 1.22e-13 | 47 |
gut-associated lymphoid tissue | 3.90e-11 | 2 |
mucosa-associated lymphoid tissue | 3.90e-11 | 2 |
lymphoid tissue | 3.90e-11 | 2 |
colon | 6.92e-11 | 2 |
large intestine | 6.92e-11 | 2 |
organ component layer | 1.68e-09 | 24 |
intestinal mucosa | 2.01e-09 | 13 |
wall of intestine | 2.01e-09 | 13 |
gastrointestinal system mucosa | 2.01e-09 | 13 |
epithelium of mucosa | 7.70e-09 | 9 |
gastrointestinal system epithelium | 7.70e-09 | 9 |
intestinal epithelium | 7.70e-09 | 9 |
lymphoid system | 1.05e-07 | 3 |
simple columnar epithelium | 2.93e-07 | 11 |