FFCP PHASE1:Mm9::chr13:34045071..34045084,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=58 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr13:34045071..34045084,+ | |||
|description=CAGE_peak_at_chr13:34045071..34045084,+ | |description=CAGE_peak_at_chr13:34045071..34045084,+ | ||
|id=chr13:34045071..34045084,+ | |id=chr13:34045071..34045084,+ | ||
|ontology_enrichment_celltype=CL:0000239!6.17e-15!6;CL:0000677!6.17e-15!6;CL:0000212!6.17e-15!6;CL:0000584!6.17e-15!6;CL:0000075!1.09e-12!7;CL:0002563!1.22e-12!9;CL:0002251!1.22e-12!9;CL:0000473!5.92e-09!3;CL:0000627!5.92e-09!3;CL:0000682!5.92e-09!3;CL:0000066!2.71e-08!25;CL:0002076!3.80e-07!15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000682,1.65e-20,3;CL:0000239,1.71e-17,6;CL:0000677,1.71e-17,6;CL:0000584,1.71e-17,6;CL:0000075,4.89e-15,7;CL:0000066,2.86e-12,25;CL:0002563,9.36e-12,9;CL:0002251,9.36e-12,9;CL:0000473,4.06e-09,7;CL:0002076,3.93e-07,15 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!1.05e-24!43;UBERON:0000344!2.10e-21!15;UBERON:0001242!5.45e-17!13;UBERON:0000060!5.45e-17!13;UBERON:0001262!5.45e-17!13;UBERON:0004786!5.45e-17!13;UBERON:0005409!1.69e-16!59;UBERON:0003350!1.22e-12!9;UBERON:0004808!1.22e-12!9;UBERON:0001277!1.22e-12!9;UBERON:0004923!2.37e-12!24;UBERON:0000485!3.84e-10!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,2.71e-20,15;UBERON:0000160,2.34e-15,31;UBERON:0001962,1.27e-13,2;UBERON:0001961,1.27e-13,2;UBERON:0001744,1.27e-13,2;UBERON:0004923,1.69e-12,24;UBERON:0001242,2.74e-12,13;UBERON:0001262,2.74e-12,13;UBERON:0004786,2.74e-12,13;UBERON:0003350,9.36e-12,9;UBERON:0004808,9.36e-12,9;UBERON:0001277,9.36e-12,9;UBERON:0005409,8.18e-10,47;UBERON:0000485,1.17e-09,11;UBERON:0002465,2.17e-09,3;UBERON:0003199,1.53e-07,1 | |||
|phase1_expression=0,7.67745896806594,6.82498859084304,0.30246421130683,0.500895729946347,4.19698179779725,4.20502753071946,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.27974995218242,4.12936705920906,6.31655160526522,9.04600191934057,8.61884930743556,0,0.252030129759931,1.99557459589774,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.660837565967596,0.264450566663544,0,0,0,0,0.667134131534611,0.760902504450237,1.42358718463353,1.97638745668813,1.50801125280162,0.994782360205754,1.16978452271472,0.898819408654221,0.648414149624083,0.796565093017469,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.775284879504663,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.291480836629851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206035057238894,0.320919209591815,0,0,0.188626341386076,0.0936415074698824,0,0.114870937911227,0,0,0,0,0,0,0,0,0,0.188218760830661,0.169229215783353,0,0,0,0,0,0.197008964751127,0.409231043169689,0,0.192906610981141,0,0,0,0,0,0 | |phase1_expression=0,7.67745896806594,6.82498859084304,0.30246421130683,0.500895729946347,4.19698179779725,4.20502753071946,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.27974995218242,4.12936705920906,6.31655160526522,9.04600191934057,8.61884930743556,0,0.252030129759931,1.99557459589774,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.660837565967596,0.264450566663544,0,0,0,0,0.667134131534611,0.760902504450237,1.42358718463353,1.97638745668813,1.50801125280162,0.994782360205754,1.16978452271472,0.898819408654221,0.648414149624083,0.796565093017469,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.775284879504663,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.291480836629851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206035057238894,0.320919209591815,0,0,0.188626341386076,0.0936415074698824,0,0.114870937911227,0,0,0,0,0,0,0,0,0,0.188218760830661,0.169229215783353,0,0,0,0,0,0.197008964751127,0.409231043169689,0,0.192906610981141,0,0,0,0,0,0 | ||
|short_description=p@chr13:34045071..34045084,+ | |short_description=p@chr13:34045071..34045084,+ | ||
}} | }} |
Latest revision as of 22:04, 5 August 2015
Short description: | p@chr13:34045071..34045084, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr13:34045071..34045084, + |
Coexpression cluster: | MCL_coexpression_mm9:58 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
M cell of gut | 1.65e-20 | 3 |
brush border epithelial cell | 1.71e-17 | 6 |
gut absorptive cell | 1.71e-17 | 6 |
enterocyte | 1.71e-17 | 6 |
columnar/cuboidal epithelial cell | 4.89e-15 | 7 |
epithelial cell | 2.86e-12 | 25 |
intestinal epithelial cell | 9.36e-12 | 9 |
epithelial cell of alimentary canal | 9.36e-12 | 9 |
defensive cell | 4.06e-09 | 7 |
endo-epithelial cell | 3.93e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
mucosa | 2.71e-20 | 15 |
intestine | 2.34e-15 | 31 |
gut-associated lymphoid tissue | 1.27e-13 | 2 |
mucosa-associated lymphoid tissue | 1.27e-13 | 2 |
lymphoid tissue | 1.27e-13 | 2 |
organ component layer | 1.69e-12 | 24 |
intestinal mucosa | 2.74e-12 | 13 |
wall of intestine | 2.74e-12 | 13 |
gastrointestinal system mucosa | 2.74e-12 | 13 |
epithelium of mucosa | 9.36e-12 | 9 |
gastrointestinal system epithelium | 9.36e-12 | 9 |
intestinal epithelium | 9.36e-12 | 9 |
gastrointestinal system | 8.18e-10 | 47 |
simple columnar epithelium | 1.17e-09 | 11 |
lymphoid system | 2.17e-09 | 3 |
egg chamber | 1.53e-07 | 1 |