FFCP PHASE1:Hg19::chr10:10836919..10836948,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=18383 | |HGNC=18383 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000415590,ENST00000434919_5end | |association_with_transcript=0bp_to_ENST00000415590,ENST00000434919_5end | ||
|cluster_id=chr10:10836919..10836948,- | |||
|coexpression_cluster_id=C1562 | |||
|description=CAGE_peak_2_at_SFTA1P_5end | |description=CAGE_peak_2_at_SFTA1P_5end | ||
|id=chr10:10836919..10836948,- | |id=chr10:10836919..10836948,- | ||
|ontology_enrichment_celltype=CL:0000066!4.78e-11!254;CL:0000077!2.26e-10!19;CL:0000076!1.50e-09!62;CL:0000220!3.74e-08!246;CL:0002321!7.11e-08!248;CL:0002076!1.48e-07!43;CL:0002368!3.46e-07!13 | |ontology_enrichment_celltype=CL:0000066!4.78e-11!254;CL:0000077!2.26e-10!19;CL:0000076!1.50e-09!62;CL:0000220!3.74e-08!246;CL:0002321!7.11e-08!248;CL:0002076!1.48e-07!43;CL:0002368!3.46e-07!13 | ||
|ontology_enrichment_celltype_v019=CL:0000077;4.74e-16;19!CL:0002368;5.22e-12;13!CL:0002159;1.75e-10;14!CL:0000076;7.36e-08;63!CL:0002076;1.67e-07;42!CL:0002202;3.30e-07;9!CL:0002632;3.30e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.87e-18,253;CL:0000076,8.50e-18,63;CL:0000077,3.48e-16,19;CL:0002368,3.94e-12,13;CL:0002159,1.56e-10,14;CL:0002076,7.86e-10,42;CL:0002202,2.76e-07,9;CL:0002632,2.76e-07,9;CL:0000223,3.06e-07,58;CL:0002321,6.17e-07,250 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1749;8.81e-08;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,7.33e-08,14 | |||
|ontology_enrichment_uberon=UBERON:0000481!3.21e-13!347;UBERON:0000119!1.02e-12!312;UBERON:0000483!8.37e-12!309;UBERON:0000475!6.47e-11!365;UBERON:0000033!1.19e-08!123;UBERON:0000153!1.90e-07!129;UBERON:0007811!1.90e-07!129;UBERON:0000064!2.58e-07!219;UBERON:0004121!3.31e-07!169 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,2.45733936501509,1.39560233594486,1.96597234917155,1.05506791291381,0.123766352960047,0.331397375727916,0,0,0,0,0.246242116153576,0.204000691244253,0,1.71741592278634,0.273748850145768,1.25542639594803,0,0,0,0,0,0,1.83884244895785,2.409647350226,1.47901604066715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.639312809217652,0,0,0.144846518960824,0,0,0.661743720148475,0.443458794925128,0.263504357079378,0.982343066232845,1.09288586487763,2.22470665670658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0.112611480483322,0,0,0,0,0,1.74437620857014,1.98788780678127,0.12663051166458,0.264818361626438,0,0,0.560677600142307,0,0.98667019366864,0,1.0776853765575,0.326923806226917,0.454072282934794,0,1.40592859100278,0,0.570471821544449,0.149448680551801,0.469737994575059,1.29498355494505,0.98315564691574,0.61246251376468,0.122834317311768,0.413303124703062,0,0,0,0,0.168336113954066,0,0.554128230968366,0.438977620880838,0.30648779579902,0.901428353439581,1.81491493056034,0.538168907066586,1.70845911054854,0.635795703478686,0,0,0.515281080091258,0.744467425326359,0,0,0,0,0,0.355009592516614,0,0,8.50347753918506,5.45492241181669,16.6346665325622,0,0,0,0.10366105501537,0,0,0,0,0,1.85747171212792,3.60939740834793,0,0,0,0,0,0,0,0,0,0,2.80483547606892,2.4694440679884,0,0,0,0,0,0.122988438543114,1.88724591328378,1.53650399572076,12.3641928583382,0.603173834469785,10.1847289674383,0.651616610620649,0,2.88662684050547,0.115930404975077,0,0,0,0,0,0,0,0,0,8.43604505880993,6.38332087155666,2.83550194484773,1.34337784054272,2.3250715081117,2.68367875415648,0,0,0,0,0,0,0,0,0,0,0,0,2.69114602428866,0.43596006883328,2.3468251462704,0.129271715757778,0,0,0,0,2.05765899409714,0,1.0656887160644,2.7165818795048,0,0,0,2.13235169245527,0,12.359014459443,8.71533458600294,2.99918973546171,0,0,0,16.5341150289192,2.29723871668228,0,0.144781306667579,0.205476322550383,0.358121926479791,0,0,0,0,0,0,0,0,0,0,0,0,0,0.500170521059677,1.08506009479894,0,0,0,0,1.80567659836631,0,0,1.32845119707087,0.184369168541703,0,1.76221041716467,1.71571711905428,0,0,0,1.5156378572313,3.32870879020994,0,0,0.153461973288062,0,0.256278298511402,0,0.160853921143607,0,0,0,0,0,0,0,0.601519410909855,0,0,0,0,0,0,0.784349769176855,0,0,0,0,2.37507507712353,0,0.541892875087706,0.501689773854853,0.254876273045038,0,0.223874754722178,0,0,1.79515087581472,7.54433685109323,0,3.40035338437484,0,0,1.14853107599234,1.95018073810956,0,0,0.154048617114644,0.460511024178389,0.689182862422653,0,0,0.426133137080504,1.24644849905432,7.60310610660499,3.2672311452068,9.44334072459923,1.6185244936888,0,0,0,0.308033580176089,1.59691809095107,0,0,0.286249773483982,4.09374206295634,18.0336272089674,7.05331717518152,0.255897791311334,0,0,0.78494864019923,0.539617372749944,0.274537029736055,0.471249609382746,1.61745985258653,3.17020642346017,0,0.48763373908959,0.243713489631284,0,0,0,0,0,0,5.26141062304515,0,0,1.82619339266434,0.30982349809975,0.281695602532241,0.143411352204052,0.0982490410131212,2.1400263088875,0,0.211107635297664,0,0,0,3.65644028356946,5.3624182042863,3.26672954583968,4.61304623806218,0.43050537267123,1.68471475667626,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,9.80160863924127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.586032717087576,5.4612234787281,0,0,0.95497793895076,0,0.307160702099232,0,0.281338832821026,3.22795244566427,0,0,0,0.276283915531148,0,0,0,4.66559381492711,0.629078458031288,0,0,0,0,6.66821940867821,0,0.371072392647405,0,0,0,0,1.93448862085349,0,0.472775363535873,0,0,0,0.885741385813839,0.120596438625408,0,0.221158519862449,0,0,0,0,0,2.84855139617503,0,0,0,0.638002319463839,0,0,0,0,0,0,0,0,0,0,0.210998064528027,7.5087091753208,0,0,0,0.265372693510018,0,0,0,0,0.067401132980677,0,0.468528891450678,0,0.978323094660449,0,0,0,0,0.31593289814244,0,0,0.664653872707185,0.661983911750998,0,0,0,15.5315633774715,0,0.587954384486266,13.7553546397036,0,4.47163684426203,0,0,0,0,0,0,0,0.19871461170299,0.253243183823515,0,4.00794101257669,0,2.79733453414982,0,11.4536596165916,0,1.1524383839052,0,0,0,0,0,0,0,0.410716136675979,0,0.859530882839914,0,0,0,0,0,0,0.223171457441873,0,0.360299883542404,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303747783290123,0,0,0,3.16801009558219,0,23.4136540729723,0,0,0,0,0,0,0,0,0,0.226624183040251,0,0,0.387848869084652,0.39669780522807,0,4.22889013390003,3.63077202730162,2.51526888159466,4.14239055347196,0,0,0,7.66009509324218,2.72008901684737,3.2589686222951,0,0,0,0,0.610131324509816,0.500763722825999,0,0,0.248385611765534,0,0.999843263696853,0,0,0.470531639396343,0,0,0,0,0,1.13641803165053,1.0062716070103,0,0.457680136793847,0.151230923763239,0,0,1.43367090447332,0.899606224327209,0.155262956876259,0,5.0509925766019,1.04349012362347,1.50257608997218,11.8049615772327,1.22061219961398,0.181848659202559,4.08160116761456,0.464033759878494,0.7961917773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| ||
|short_description=p2@SFTA1P | |short_description=p2@SFTA1P | ||
}} | }} |
Latest revision as of 06:28, 16 September 2015
Short description: | p2@SFTA1P |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SFTA1P_5end |
Coexpression cluster: | C1562_papillary_mesothelioma_oral_mucinous_Multipotent_Smooth_endometrial |
Association with transcript: | 0bp_to_ENST00000415590, ENST00000434919_5end |
EntrezGene: | NA |
HGNC: | 18383 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.87e-18 | 253 |
squamous epithelial cell | 8.50e-18 | 63 |
mesothelial cell | 3.48e-16 | 19 |
respiratory epithelial cell | 3.94e-12 | 13 |
general ecto-epithelial cell | 1.56e-10 | 14 |
endo-epithelial cell | 7.86e-10 | 42 |
epithelial cell of tracheobronchial tree | 2.76e-07 | 9 |
epithelial cell of lower respiratory tract | 2.76e-07 | 9 |
endodermal cell | 3.06e-07 | 58 |
embryonic cell | 6.17e-07 | 250 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 7.33e-08 | 14 |