FFCP PHASE1:Mm9::chr10:55712183..55712186,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(3 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:55712183..55712186,- | |||
|description=CAGE_peak_at_chr10:55712183..55712186,- | |description=CAGE_peak_at_chr10:55712183..55712186,- | ||
|id=chr10:55712183..55712186,- | |id=chr10:55712183..55712186,- | ||
|ontology_enrichment_celltype=CL:0000540!4.30e-40!33;CL:0000047!4.30e-40!33;CL:0000031!4.30e-40!33;CL:0000404!4.30e-40!33;CL:0000393!1.91e-33!39;CL:0000211!1.91e-33!39;CL:0002319!2.49e-33!43;CL:0000221!1.69e-32!44;CL:0000133!1.69e-32!44;CL:0000055!3.29e-28!50;CL:0000117!4.91e-27!23;CL:0000337!4.91e-27!23;CL:0002321!3.33e-19!70;CL:0000220!3.33e-19!70;CL:0000107!4.38e-15!9;CL:0002612!7.18e-13!3;CL:0000723!1.81e-12!91;CL:0000048!1.81e-12!91;CL:0000034!1.73e-11!97;CL:0000548!2.41e-10!115;CL:0000004!2.41e-10!115;CL:0000255!2.41e-10!115;CL:0002371!5.43e-10!118;CL:0000144!1.17e-09!121;CL:0000012!1.17e-09!121 | |ontology_enrichment_celltype=CL:0000540!4.30e-40!33;CL:0000047!4.30e-40!33;CL:0000031!4.30e-40!33;CL:0000404!4.30e-40!33;CL:0000393!1.91e-33!39;CL:0000211!1.91e-33!39;CL:0002319!2.49e-33!43;CL:0000221!1.69e-32!44;CL:0000133!1.69e-32!44;CL:0000055!3.29e-28!50;CL:0000117!4.91e-27!23;CL:0000337!4.91e-27!23;CL:0002321!3.33e-19!70;CL:0000220!3.33e-19!70;CL:0000107!4.38e-15!9;CL:0002612!7.18e-13!3;CL:0000723!1.81e-12!91;CL:0000048!1.81e-12!91;CL:0000034!1.73e-11!97;CL:0000548!2.41e-10!115;CL:0000004!2.41e-10!115;CL:0000255!2.41e-10!115;CL:0002371!5.43e-10!118;CL:0000144!1.17e-09!121;CL:0000012!1.17e-09!121 | ||
|ontology_enrichment_celltype_v019_2=CL:0002614,1.13e-08,3;CL:0002612,1.59e-08,3;CL:0000540,8.60e-07,33;CL:0000047,8.60e-07,33;CL:0000031,8.60e-07,33;CL:0000404,8.60e-07,33 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.81e-18!73;UBERON:0005743!2.81e-18!73;UBERON:0000073!1.06e-17!75;UBERON:0001016!1.06e-17!75;UBERON:0002410!4.38e-15!9;UBERON:0001948!5.04e-13!5;UBERON:0002315!5.04e-13!5;UBERON:0002257!7.18e-13!3;UBERON:0002005!1.03e-12!3;UBERON:0005428!1.03e-12!3;UBERON:0002020!2.87e-12!34;UBERON:0000010!2.97e-12!11;UBERON:0004121!4.15e-12!102;UBERON:0000924!4.15e-12!102;UBERON:0006601!4.15e-12!102;UBERON:0002240!7.10e-11!6;UBERON:0005174!7.10e-11!6;UBERON:0001137!7.10e-11!6;UBERON:0002346!1.78e-08!71;UBERON:0003075!1.78e-08!71;UBERON:0007284!1.78e-08!71;UBERON:0002420!3.23e-08!8;UBERON:0007245!3.23e-08!8;UBERON:0010009!3.23e-08!8;UBERON:0010011!3.23e-08!8;UBERON:0000454!3.23e-08!8;UBERON:0001049!2.28e-07!52;UBERON:0005068!2.28e-07!52;UBERON:0006241!2.28e-07!52;UBERON:0007135!2.28e-07!52 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002038,1.13e-08,3;UBERON:0009663,1.13e-08,3;UBERON:0009661,1.13e-08,3;UBERON:0000125,1.13e-08,3;UBERON:0002308,1.13e-08,3;UBERON:0002257,1.59e-08,3;UBERON:0010313,1.88e-08,3;UBERON:0002342,1.88e-08,3;UBERON:0002005,1.88e-08,3;UBERON:0005428,1.88e-08,3;UBERON:0005062,1.88e-08,3;UBERON:0002950,8.08e-07,4;UBERON:0001891,8.08e-07,4;UBERON:0009616,8.08e-07,4;UBERON:0010286,8.08e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9559956734746,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139986421625363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.518448061542388,0,0,0.285650984403804,0,0.367472397644862,0.287536413054709,0,0,0.510749352340751,0.768032666281217,0.395658863190582,0.274462930807229,0,0.558365998002762,0,3.0559649555362,0.589257170947335,1.28134512719193,0.372798891650601,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26203287766503,0.390438744296638,0.430846795465598,0.238968797952552,0.222798674082394,0,0.404810701674894,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9559956734746,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139986421625363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.518448061542388,0,0,0.285650984403804,0,0.367472397644862,0.287536413054709,0,0,0.510749352340751,0.768032666281217,0.395658863190582,0.274462930807229,0,0.558365998002762,0,3.0559649555362,0.589257170947335,1.28134512719193,0.372798891650601,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26203287766503,0.390438744296638,0.430846795465598,0.238968797952552,0.222798674082394,0,0.404810701674894,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr10:55712183..55712186,- | |short_description=p@chr10:55712183..55712186,- | ||
}} | }} |
Latest revision as of 11:26, 4 August 2015
Short description: | p@chr10:55712183..55712186, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:55712183..55712186, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron of the substantia nigra | 1.13e-08 | 3 |
neuron of the ventral spinal cord | 1.59e-08 | 3 |
neuron | 8.60e-07 | 33 |
neuronal stem cell | 8.60e-07 | 33 |
neuroblast | 8.60e-07 | 33 |
electrically signaling cell | 8.60e-07 | 33 |
Ontology term | p-value | n |
---|---|---|
substantia nigra | 1.13e-08 | 3 |
telencephalic nucleus | 1.13e-08 | 3 |
midbrain nucleus | 1.13e-08 | 3 |
neural nucleus | 1.13e-08 | 3 |
nucleus of brain | 1.13e-08 | 3 |
ventral horn of spinal cord | 1.59e-08 | 3 |
neural crest-derived structure | 1.88e-08 | 3 |
neural crest | 1.88e-08 | 3 |
enteric nervous system | 1.88e-08 | 3 |
vagal neural crest | 1.88e-08 | 3 |
neural fold | 1.88e-08 | 3 |
regional part of midbrain | 8.08e-07 | 4 |
midbrain | 8.08e-07 | 4 |
presumptive midbrain | 8.08e-07 | 4 |
midbrain neural tube | 8.08e-07 | 4 |