FFCP PHASE1:Hg19::chr10:126234657..126234667,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=64077 | |EntrezGene=64077 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30042 | |HGNC=30042 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=63bp_to_ENST00000482963_5end | |association_with_transcript=63bp_to_ENST00000482963_5end | ||
|cluster_id=chr10:126234657..126234667,+ | |||
|coexpression_cluster_id=C1568 | |||
|description=CAGE_peak_10_at_LHPP_5end | |description=CAGE_peak_10_at_LHPP_5end | ||
|id=chr10:126234657..126234667,+ | |id=chr10:126234657..126234667,+ | ||
|ontology_enrichment_celltype=CL:0000236!5.66e-54!14;CL:0000945!5.62e-42!24;CL:0000826!5.62e-42!24;CL:0000838!9.85e-18!52;CL:0000542!2.43e-17!53;CL:0000051!2.43e-17!53;CL:0000817!1.70e-16!3;CL:0000785!8.98e-12!2;CL:0000955!8.98e-12!2;CL:0000818!8.98e-12!2;CL:0000954!8.98e-12!2;CL:0000816!8.98e-12!2;CL:0002087!2.28e-09!119;CL:0000842!7.72e-08!3;CL:0000738!1.92e-07!140;CL:0000819!7.60e-07!1 | |ontology_enrichment_celltype=CL:0000236!5.66e-54!14;CL:0000945!5.62e-42!24;CL:0000826!5.62e-42!24;CL:0000838!9.85e-18!52;CL:0000542!2.43e-17!53;CL:0000051!2.43e-17!53;CL:0000817!1.70e-16!3;CL:0000785!8.98e-12!2;CL:0000955!8.98e-12!2;CL:0000818!8.98e-12!2;CL:0000954!8.98e-12!2;CL:0000816!8.98e-12!2;CL:0002087!2.28e-09!119;CL:0000842!7.72e-08!3;CL:0000738!1.92e-07!140;CL:0000819!7.60e-07!1 | ||
|ontology_enrichment_celltype_v019=CL:0000236;2.79e-49;13!CL:0000945;2.48e-47;24!CL:0000542;1.52e-19;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,2.41e-47,24;CL:0000826,2.41e-47,24;CL:0000236,7.40e-46,14;CL:0000838,1.04e-21,52;CL:0000542,2.71e-21,53;CL:0000051,2.71e-21,53;CL:0002087,1.75e-09,115;CL:0002031,4.54e-09,120;CL:0000738,6.05e-08,136 | |||
|ontology_enrichment_development_v019=CL:0000051;1.52e-19;53!UBERON:0006965;3.12e-10;2 | |||
|ontology_enrichment_disease=DOID:0060073!7.60e-07!1;DOID:8675!7.60e-07!1 | |||
|ontology_enrichment_disease_v019=DOID:0060058;2.92e-08;10 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,3.14e-08,10 | |||
|ontology_enrichment_uberon=UBERON:0004177!5.91e-12!7;UBERON:0001042!1.52e-08!10;UBERON:0009145!1.52e-08!10;UBERON:0002106!6.05e-08!3;UBERON:0004854!6.05e-08!3;UBERON:0009034!6.05e-08!3;UBERON:0002095!6.05e-08!3;UBERON:0004782!6.05e-08!3;UBERON:0003281!6.05e-08!3;UBERON:0009664!6.05e-08!3;UBERON:0002296!6.05e-08!3;UBERON:0005602!6.05e-08!3;UBERON:0001179!6.05e-08!3;UBERON:0006293!6.05e-08!3;UBERON:0006562!8.92e-08!11;UBERON:0002372!5.43e-07!1;UBERON:0001961!5.43e-07!1;UBERON:0001744!5.43e-07!1;UBERON:0001735!5.43e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0002372;2.06e-19;1!UBERON:0001961;2.06e-19;1!UBERON:0001744;2.06e-19;1!UBERON:0001042;2.06e-19;1!UBERON:0001735;2.06e-19;1!UBERON:0006562;2.17e-10;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002372,2.25e-19,1;UBERON:0001961,2.25e-19,1;UBERON:0001744,2.25e-19,1;UBERON:0001735,2.25e-19,1 | |||
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|short_description=p10@LHPP | |short_description=p10@LHPP | ||
}} | }} |
Latest revision as of 22:20, 16 September 2015
Short description: | p10@LHPP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_LHPP_5end |
Coexpression cluster: | C1568_lymphoma_CD19_vein_tonsil_Burkitt_non_diffuse |
Association with transcript: | 63bp_to_ENST00000482963_5end |
EntrezGene: | LHPP |
HGNC: | 30042 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 2.41e-47 | 24 |
pro-B cell | 2.41e-47 | 24 |
B cell | 7.40e-46 | 14 |
lymphoid lineage restricted progenitor cell | 1.04e-21 | 52 |
lymphocyte | 2.71e-21 | 53 |
common lymphoid progenitor | 2.71e-21 | 53 |
nongranular leukocyte | 1.75e-09 | 115 |
hematopoietic lineage restricted progenitor cell | 4.54e-09 | 120 |
leukocyte | 6.05e-08 | 136 |
Ontology term | p-value | n |
---|---|---|
tonsil | 2.25e-19 | 1 |
mucosa-associated lymphoid tissue | 2.25e-19 | 1 |
lymphoid tissue | 2.25e-19 | 1 |
tonsillar ring | 2.25e-19 | 1 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 3.14e-08 | 10 |