FFCP PHASE1:Mm9::chr11:6372235..6372242,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene= | |EntrezGene= | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=438 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=37bp_to_ENSMUST00000175144_5end | |association_with_transcript=37bp_to_ENSMUST00000175144_5end | ||
|cluster_id=chr11:6372235..6372242,- | |||
|description=CAGE_peak_1_at_ENSMUST00000175144_5end | |description=CAGE_peak_1_at_ENSMUST00000175144_5end | ||
|id=chr11:6372235..6372242,- | |id=chr11:6372235..6372242,- | ||
|ontology_enrichment_celltype=CL:0000117!1.30e-19!23;CL:0000337!1.30e-19!23;CL:0002319!1.40e-15!43;CL:0000221!3.95e-15!44;CL:0000133!3.95e-15!44;CL:0000540!1.33e-14!33;CL:0000047!1.33e-14!33;CL:0000031!1.33e-14!33;CL:0000404!1.33e-14!33;CL:0000055!2.32e-14!50;CL:0000393!1.74e-13!39;CL:0000211!1.74e-13!39;CL:0002321!3.12e-10!70;CL:0000220!3.12e-10!70;CL:0002609!3.96e-10!6;CL:0002610!2.48e-09!3;CL:0002612!1.10e-08!3 | |ontology_enrichment_celltype=CL:0000117!1.30e-19!23;CL:0000337!1.30e-19!23;CL:0002319!1.40e-15!43;CL:0000221!3.95e-15!44;CL:0000133!3.95e-15!44;CL:0000540!1.33e-14!33;CL:0000047!1.33e-14!33;CL:0000031!1.33e-14!33;CL:0000404!1.33e-14!33;CL:0000055!2.32e-14!50;CL:0000393!1.74e-13!39;CL:0000211!1.74e-13!39;CL:0002321!3.12e-10!70;CL:0000220!3.12e-10!70;CL:0002609!3.96e-10!6;CL:0002610!2.48e-09!3;CL:0002612!1.10e-08!3 | ||
|ontology_enrichment_celltype_v019_2=CL:0002610,2.21e-65,3;CL:0000117,6.04e-16,23;CL:0000337,6.04e-16,23;CL:0000540,2.20e-11,33;CL:0000047,2.20e-11,33;CL:0000031,2.20e-11,33;CL:0000404,2.20e-11,33;CL:0000393,9.26e-10,39;CL:0000211,9.26e-10,39;CL:0002319,6.31e-09,43;CL:0000221,9.66e-09,44;CL:0000133,9.66e-09,44;CL:0002612,1.59e-08,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002020!5.51e-14!34;UBERON:0001017!2.68e-12!73;UBERON:0005743!2.68e-12!73;UBERON:0000073!7.83e-12!75;UBERON:0001016!7.83e-12!75;UBERON:0002616!1.42e-11!49;UBERON:0000955!2.90e-11!50;UBERON:0006238!2.90e-11!50;UBERON:0001049!1.70e-10!52;UBERON:0005068!1.70e-10!52;UBERON:0006241!1.70e-10!52;UBERON:0007135!1.70e-10!52;UBERON:0002791!2.10e-10!29;UBERON:0003528!2.10e-10!29;UBERON:0001893!2.10e-10!29;UBERON:0004684!2.48e-09!3;UBERON:0002275!2.48e-09!3;UBERON:0000033!2.91e-09!63;UBERON:0002257!1.10e-08!3;UBERON:0002780!2.36e-08!39;UBERON:0001890!2.36e-08!39;UBERON:0006240!2.36e-08!39;UBERON:0000956!2.50e-08!21;UBERON:0001869!2.50e-08!21;UBERON:0000203!2.50e-08!21;UBERON:0004121!2.97e-08!102;UBERON:0000924!2.97e-08!102;UBERON:0006601!2.97e-08!102;UBERON:0003080!4.48e-08!40 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004684,2.21e-65,3;UBERON:0002275,2.21e-65,3;UBERON:0002257,1.59e-08,3;UBERON:0000073,2.91e-07,54 | |||
|phase1_expression=0.160148847104794,0,0,0,0.500895729946347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190023419456374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0,0,0,0.218025156380447,0.439372365468944,0,0.279972843250725,0,0,0,0,0,0,0,0,0,0,0,0,0.899899717281399,0,0,0,0,0.103689612308478,0.405017814995072,0.420649922702764,0,0,0.367472397644862,0.287536413054709,0,6.60695285996332,4.97980618532232,5.83704826373725,0.791317726381163,0.457438218012048,0,0.558365998002762,0,0,5.00868595305235,0.996601765593721,0.186399445825301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0,0,0,0.126473074248515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159454768657487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129358683782755,0,0,0,0,0,0,0,0,0,0.161464426695906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0.13020438484395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974578807397524,0,0,0,0.221985953374065,0,0,0,0,0,0.214368379079066,0,0,0.460325236507177,0,0,0.685082519770642,0,0,0,0.906284817968409,0,0.103787347584177,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0.160148847104794,0,0,0,0.500895729946347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190023419456374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0,0,0,0.218025156380447,0.439372365468944,0,0.279972843250725,0,0,0,0,0,0,0,0,0,0,0,0,0.899899717281399,0,0,0,0,0.103689612308478,0.405017814995072,0.420649922702764,0,0,0.367472397644862,0.287536413054709,0,6.60695285996332,4.97980618532232,5.83704826373725,0.791317726381163,0.457438218012048,0,0.558365998002762,0,0,5.00868595305235,0.996601765593721,0.186399445825301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0,0,0,0.126473074248515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159454768657487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129358683782755,0,0,0,0,0,0,0,0,0,0.161464426695906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0.13020438484395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974578807397524,0,0,0,0.221985953374065,0,0,0,0,0,0.214368379079066,0,0,0.460325236507177,0,0,0.685082519770642,0,0,0,0.906284817968409,0,0.103787347584177,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p1@ENSMUST00000175144 | |short_description=p1@ENSMUST00000175144 | ||
}} | }} |
Latest revision as of 07:16, 6 August 2015
Short description: | p1@ENSMUST00000175144 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_ENSMUST00000175144_5end |
Coexpression cluster: | MCL_coexpression_mm9:438 |
Association with transcript: | 37bp_to_ENSMUST00000175144_5end |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
raphe nuclei neuron | 2.21e-65 | 3 |
CNS neuron (sensu Vertebrata) | 6.04e-16 | 23 |
neuroblast (sensu Vertebrata) | 6.04e-16 | 23 |
neuron | 2.20e-11 | 33 |
neuronal stem cell | 2.20e-11 | 33 |
neuroblast | 2.20e-11 | 33 |
electrically signaling cell | 2.20e-11 | 33 |
electrically responsive cell | 9.26e-10 | 39 |
electrically active cell | 9.26e-10 | 39 |
neural cell | 6.31e-09 | 43 |
ectodermal cell | 9.66e-09 | 44 |
neurectodermal cell | 9.66e-09 | 44 |
neuron of the ventral spinal cord | 1.59e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
raphe nuclei | 2.21e-65 | 3 |
reticular formation | 2.21e-65 | 3 |
ventral horn of spinal cord | 1.59e-08 | 3 |
regional part of nervous system | 2.91e-07 | 54 |