UBERON:0000073
From FANTOM5_SSTAR
| Name: | regional part of nervous system | |
|---|---|---|
| Namespace: | FANTOM | |
| Definition: | "An anatomical structure that is part of a nervous system [Obol]." [OBOL:automatic] | |
| Xrefs: |
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| Synonyms: | "part of nervous system" EXACT [NIF_GrossAnatomy:birnlex_1157] | |
| Comments: | grouping class | |
| Created by: | Melissa Haendel | |
| Creation date: | 2009-06-18T09:00:04Z |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0000481(multi-tissue structure) |
|---|---|
| part_of: | UBERON:0001016(nervous system) |
Children
| is a: | UBERON:0001948 (regional part of spinal cord),UBERON:0002616 (regional part of brain) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 10031-101E4 (temporal lobe, adult, pool1)
- 10032-101E5 (postcentral gyrus, adult, pool1)
- 10033-101E6 (pons, adult, pool1)
- 10034-101E7 (parietal lobe, adult, pool1)
- 10035-101E8 (paracentral gyrus, adult, pool1)
- 10036-101E9 (occipital pole, adult, pool1)
- 10037-101F1 (nucleus accumbens, adult, pool1)
- 10038-101F2 (medulla oblongata, adult, pool1)
- 10039-101F3 (insula, adult, pool1)
- 10040-101F4 (frontal lobe, adult, pool1)
... further results Mouse (Mus musculus)
- 10031-101E4 (temporal lobe, adult, pool1)
- 10032-101E5 (postcentral gyrus, adult, pool1)
- 10033-101E6 (pons, adult, pool1)
- 10034-101E7 (parietal lobe, adult, pool1)
- 10035-101E8 (paracentral gyrus, adult, pool1)
- 10036-101E9 (occipital pole, adult, pool1)
- 10037-101F1 (nucleus accumbens, adult, pool1)
- 10038-101F2 (medulla oblongata, adult, pool1)
- 10039-101F3 (insula, adult, pool1)
- 10040-101F4 (frontal lobe, adult, pool1)
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0000073 (regional part of nervous system), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
