UBERON:0000073
From FANTOM5_SSTAR
Name: | regional part of nervous system | ||
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Namespace: | FANTOM | ||
Definition: | "An anatomical structure that is part of a nervous system [Obol]." [OBOL:automatic] | ||
Xrefs: |
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Synonyms: | "part of nervous system" EXACT [NIF_GrossAnatomy:birnlex_1157] | ||
Comments: | grouping class | ||
Created by: | Melissa Haendel | ||
Creation date: | 2009-06-18T09:00:04Z |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
is_a: | UBERON:0000481(multi-tissue structure) |
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part_of: | UBERON:0001016(nervous system) |
Children
is a: | UBERON:0001948 (regional part of spinal cord),UBERON:0002616 (regional part of brain) |
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Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 10031-101E4 (temporal lobe, adult, pool1)
- 10032-101E5 (postcentral gyrus, adult, pool1)
- 10033-101E6 (pons, adult, pool1)
- 10034-101E7 (parietal lobe, adult, pool1)
- 10035-101E8 (paracentral gyrus, adult, pool1)
- 10036-101E9 (occipital pole, adult, pool1)
- 10037-101F1 (nucleus accumbens, adult, pool1)
- 10038-101F2 (medulla oblongata, adult, pool1)
- 10039-101F3 (insula, adult, pool1)
- 10040-101F4 (frontal lobe, adult, pool1)
... further results Mouse (Mus musculus)
- 10031-101E4 (temporal lobe, adult, pool1)
- 10032-101E5 (postcentral gyrus, adult, pool1)
- 10033-101E6 (pons, adult, pool1)
- 10034-101E7 (parietal lobe, adult, pool1)
- 10035-101E8 (paracentral gyrus, adult, pool1)
- 10036-101E9 (occipital pole, adult, pool1)
- 10037-101F1 (nucleus accumbens, adult, pool1)
- 10038-101F2 (medulla oblongata, adult, pool1)
- 10039-101F3 (insula, adult, pool1)
- 10040-101F4 (frontal lobe, adult, pool1)
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0000073 (regional part of nervous system), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
P-value | FFCP | Short description |
---|---|---|
1.03e-139 | FFCP PHASE2:Hg19::chr18:55019840..55019850,+#_da4432861d8611996c67012769efe99e | p5@ST8SIA3 |
1.03e-139 | FFCP PHASE1:Hg19::chr18:55019840..55019850,+#_da4432861d8611996c67012769efe99e | p5@ST8SIA3 |
1.4e-135 | FFCP PHASE1:Hg19::chr5:11588907..11588967,-#_12744785d3f2c3d802a5947ba9a38790 | p3@CTNND2 |
1.4e-135 | FFCP PHASE2:Hg19::chr5:11588907..11588967,-#_12744785d3f2c3d802a5947ba9a38790 | p3@CTNND2 |
1.47e-135 | FFCP PHASE1:Hg19::chr12:106976678..106976708,+#_8d0f92af35f7d21b484b92d329e845ad | p2@RFX4 |
1.47e-135 | FFCP PHASE2:Hg19::chr12:106976678..106976708,+#_8d0f92af35f7d21b484b92d329e845ad | p2@RFX4 |
1.29e-133 | FFCP PHASE1:Hg19::chr2:74612644..74612670,+#_ee15c6c6fdebde52ec6ff4ce716f2fd2 | p1@ENST00000412957 |
1.29e-133 | FFCP PHASE2:Hg19::chr2:74612644..74612670,+#_ee15c6c6fdebde52ec6ff4ce716f2fd2 | p1@ENST00000412957 |
1.78e-132 | FFCP PHASE2:Hg19::chr4:46126063..46126087,-#_0ab1b76b12f1e0db7d9b0992b30d17b2 | p2@GABRG1 |
1.78e-132 | FFCP PHASE1:Hg19::chr4:46126063..46126087,-#_0ab1b76b12f1e0db7d9b0992b30d17b2 | p2@GABRG1 |
1.89e-132 | FFCP PHASE1:Hg19::chr2:50201220..50201261,-#_380dfc71f43866418b44d111bd58b961 | p3@NRXN1 |
1.89e-132 | FFCP PHASE2:Hg19::chr2:50201220..50201261,-#_380dfc71f43866418b44d111bd58b961 | p3@NRXN1 |
4.31e-132 | FFCP PHASE2:Hg19::chr5:87439352..87439386,-#_7df86ef191b58995dce21e3e0e3ef39f | p@chr5:87439352..87439386, - |
4.31e-132 | FFCP PHASE1:Hg19::chr5:87439352..87439386,-#_7df86ef191b58995dce21e3e0e3ef39f | p@chr5:87439352..87439386, - |
5.61e-132 | FFCP PHASE1:Hg19::chr1:84630610..84630621,+#_0fe31d3b1bc6fe2e4a81c58fbdf3267e | p17@PRKACB |
5.61e-132 | FFCP PHASE2:Hg19::chr1:84630610..84630621,+#_0fe31d3b1bc6fe2e4a81c58fbdf3267e | p17@PRKACB |
1.28e-130 | FFCP PHASE2:Hg19::chr5:112074041..112074101,+#_0b50d3a6a5522f12ae0b8651991deda2 | p4@APC |
1.28e-130 | FFCP PHASE1:Hg19::chr5:112074041..112074101,+#_0b50d3a6a5522f12ae0b8651991deda2 | p4@APC |
2.58e-130 | FFCP PHASE1:Hg19::chr5:11384884..11384916,-#_f23624ceb975e8ee183fa5b038491b72 | p8@CTNND2 |
2.58e-130 | FFCP PHASE2:Hg19::chr5:11384884..11384916,-#_f23624ceb975e8ee183fa5b038491b72 | p8@CTNND2 |
3.44e-130 | FFCP PHASE1:Hg19::chr12:106976774..106976788,+#_a9d1f7f2b2bbcb84affab5f932ebea84 | p1@RFX4 |
3.44e-130 | FFCP PHASE2:Hg19::chr12:106976774..106976788,+#_a9d1f7f2b2bbcb84affab5f932ebea84 | p1@RFX4 |
6.81e-130 | FFCP PHASE2:Hg19::chr6:136847393..136847403,-#_05de64c35991fd5c5eee96839b8a7a72 | p15@MAP7 |
6.81e-130 | FFCP PHASE1:Hg19::chr6:136847393..136847403,-#_05de64c35991fd5c5eee96839b8a7a72 | p15@MAP7 |
1.57e-129 | FFCP PHASE2:Hg19::chr5:146314142..146314146,-#_0cc3a589643390d8056a6f328826f390 | p@chr5:146314142..146314146, - |
1.57e-129 | FFCP PHASE1:Hg19::chr5:146314142..146314146,-#_0cc3a589643390d8056a6f328826f390 | p@chr5:146314142..146314146, - |
3.15e-129 | FFCP PHASE2:Hg19::chr18:32398296..32398318,+#_0c4a46267db1fe8af08e410db6022e47 | p7@DTNA |
3.15e-129 | FFCP PHASE1:Hg19::chr18:32398296..32398318,+#_0c4a46267db1fe8af08e410db6022e47 | p7@DTNA |
5.62e-129 | FFCP PHASE2:Hg19::chr17:68101117..68101162,+#_166d617cf8137fa60386762fa567ef33 | p2@KCNJ16 |
5.62e-129 | FFCP PHASE1:Hg19::chr17:68101117..68101162,+#_166d617cf8137fa60386762fa567ef33 | p2@KCNJ16 |
6.58e-129 | FFCP PHASE2:Hg19::chr1:84630574..84630602,+#_b75709eede26e2bc1805bf3a507915c1 | p9@PRKACB |
6.58e-129 | FFCP PHASE1:Hg19::chr1:84630574..84630602,+#_b75709eede26e2bc1805bf3a507915c1 | p9@PRKACB |
9.65e-129 | FFCP PHASE2:Hg19::chr3:153838982..153839001,-#_6172e2b6779a97a1a0ab98ae5ba78318 | p4@ARHGEF26-AS1 |
9.65e-129 | FFCP PHASE1:Hg19::chr3:153838982..153839001,-#_6172e2b6779a97a1a0ab98ae5ba78318 | p4@ARHGEF26-AS1 |
6.04e-128 | FFCP PHASE1:Hg19::chr15:79576178..79576222,-#_b96a434f8a9e948d70c6ce6e6e17906b | p1@ENST00000559225, p1@ENST00000559979, p1@ENST00000560533 |
6.04e-128 | FFCP PHASE2:Hg19::chr15:79576178..79576222,-#_b96a434f8a9e948d70c6ce6e6e17906b | p1@ENST00000559225, p1@ENST00000559979, p1@ENST00000560533 |
6.67e-128 | FFCP PHASE2:Hg19::chr12:106976656..106976672,+#_059606fec18d91c863398f77a8ac62d8 | p4@RFX4 |
6.67e-128 | FFCP PHASE1:Hg19::chr12:106976656..106976672,+#_059606fec18d91c863398f77a8ac62d8 | p4@RFX4 |
7.68e-128 | FFCP PHASE1:Hg19::chr5:87437100..87437115,-#_c42b52beddce76cbf7b63c30c90dbbef | p1@LOC100289347 |
7.68e-128 | FFCP PHASE2:Hg19::chr5:87437100..87437115,-#_c42b52beddce76cbf7b63c30c90dbbef | p1@LOC100289347 |
1.54e-126 | FFCP PHASE1:Hg19::chr2:74612614..74612643,+#_a4da7a72e42648b298a70d2b9533d24e | p1@ENST00000418990, p1@ENST00000426715, p1@ENST00000427343 |
1.54e-126 | FFCP PHASE2:Hg19::chr2:74612614..74612643,+#_a4da7a72e42648b298a70d2b9533d24e | p1@ENST00000418990, p1@ENST00000426715, p1@ENST00000427343 |
1.55e-126 | FFCP PHASE1:Hg19::chr11:35441048..35441059,-#_1221cca131a5bc99df8de0e028b57c2b | p4@SLC1A2 |
1.55e-126 | FFCP PHASE2:Hg19::chr11:35441048..35441059,-#_1221cca131a5bc99df8de0e028b57c2b | p4@SLC1A2 |
1.87e-126 | FFCP PHASE2:Hg19::chr5:11386115..11386130,-#_4e38553aac5e44bf19add2a467c0a2a0 | p2@CTNND2 |
1.87e-126 | FFCP PHASE1:Hg19::chr5:11386115..11386130,-#_4e38553aac5e44bf19add2a467c0a2a0 | p2@CTNND2 |
2.32e-126 | FFCP PHASE2:Hg19::chr6:80131670..80131724,+#_866055af00b1d00e56cec62706405a07 | p@chr6:80131670..80131724, + |
2.32e-126 | FFCP PHASE1:Hg19::chr6:80131670..80131724,+#_866055af00b1d00e56cec62706405a07 | p@chr6:80131670..80131724, + |
2.35e-126 | FFCP PHASE1:Hg19::chr9:87283501..87283520,+#_62a5307655248b87703cee41528e7c1c | p17@NTRK2 |
2.35e-126 | FFCP PHASE2:Hg19::chr9:87283501..87283520,+#_62a5307655248b87703cee41528e7c1c | p17@NTRK2 |
2.47e-126 | FFCP PHASE2:Hg19::chrX:13835312..13835321,-#_9fbc05f52781bcf17ef7ddc158360c16 | p9@GPM6B |
2.47e-126 | FFCP PHASE1:Hg19::chrX:13835312..13835321,-#_9fbc05f52781bcf17ef7ddc158360c16 | p9@GPM6B |
6.64e-126 | FFCP PHASE2:Hg19::chr17:54230819..54230848,+#_6c11ee96c921b7760707466736ce6e76 | p1@ANKFN1 |
6.64e-126 | FFCP PHASE1:Hg19::chr17:54230819..54230848,+#_6c11ee96c921b7760707466736ce6e76 | p1@ANKFN1 |
8.82e-126 | FFCP PHASE2:Hg19::chr2:73286253..73286279,-#_58f50bfb72174291b36614c9c7c64190 | p3@SFXN5 |
8.82e-126 | FFCP PHASE1:Hg19::chr2:73286253..73286279,-#_58f50bfb72174291b36614c9c7c64190 | p3@SFXN5 |
1.13e-125 | FFCP PHASE1:Hg19::chr15:46702499..46702523,+#_236f7f4f7d17fadfba59b4a5bed21a90 | p@chr15:46702499..46702523, + |
1.13e-125 | FFCP PHASE2:Hg19::chr15:46702499..46702523,+#_236f7f4f7d17fadfba59b4a5bed21a90 | p@chr15:46702499..46702523, + |
1.15e-125 | FFCP PHASE1:Hg19::chr6:56716896..56716928,-#_6c69f61d58662dc36011c9a293c7e9bb | p8@DST |
1.15e-125 | FFCP PHASE2:Hg19::chr6:56716896..56716928,-#_6c69f61d58662dc36011c9a293c7e9bb | p8@DST |
1.37e-125 | FFCP PHASE2:Hg19::chr3:167452969..167453019,+#_89a838049e58346d3c9274722549f357 | p2@SERPINI1 |
1.37e-125 | FFCP PHASE1:Hg19::chr3:167452969..167453019,+#_89a838049e58346d3c9274722549f357 | p2@SERPINI1 |
1.38e-125 | FFCP PHASE2:Hg19::chr5:160279207..160279247,-#_db40d2260c7883e4cc045e38f2152668 | p1@ATP10B |
1.38e-125 | FFCP PHASE1:Hg19::chr5:160279207..160279247,-#_db40d2260c7883e4cc045e38f2152668 | p1@ATP10B |
1.45e-125 | FFCP PHASE1:Hg19::chr4:46126009..46126045,-#_68f4143f77528f7c5c078cfa88b2dc34 | p1@GABRG1 |
1.45e-125 | FFCP PHASE2:Hg19::chr4:46126009..46126045,-#_68f4143f77528f7c5c078cfa88b2dc34 | p1@GABRG1 |
2.45e-125 | FFCP PHASE2:Hg19::chr1:2005182..2005194,+#_691e0367fd0a88671329dfbdee01b0fe | p8@PRKCZ |
2.45e-125 | FFCP PHASE1:Hg19::chr1:2005182..2005194,+#_691e0367fd0a88671329dfbdee01b0fe | p8@PRKCZ |
2.7e-125 | FFCP PHASE1:Hg19::chrX:139794589..139794595,+#_4589fb288c4bdc707f8d5633044c0639 | p@chrX:139794589..139794595, + |
2.7e-125 | FFCP PHASE2:Hg19::chrX:139794589..139794595,+#_4589fb288c4bdc707f8d5633044c0639 | p@chrX:139794589..139794595, + |
2.73e-125 | FFCP PHASE2:Hg19::chr14:24047772..24047790,-#_55a0739376228594856debc8edc22467 | p6@JPH4 |
2.73e-125 | FFCP PHASE1:Hg19::chr14:24047772..24047790,-#_55a0739376228594856debc8edc22467 | p6@JPH4 |
4.98e-125 | FFCP PHASE2:Hg19::chr5:161275118..161275138,+#_70e5aefdb73b9f0aef1ffeaeae1436ba | p3@GABRA1 |
4.98e-125 | FFCP PHASE1:Hg19::chr5:161275118..161275138,+#_70e5aefdb73b9f0aef1ffeaeae1436ba | p3@GABRA1 |
1.02e-124 | FFCP PHASE2:Hg19::chr7:47420733..47420758,-#_de6efae33d7175e97429fbb347a4d5c6 | p@chr7:47420733..47420758, - |
1.02e-124 | FFCP PHASE1:Hg19::chr7:47420733..47420758,-#_de6efae33d7175e97429fbb347a4d5c6 | p@chr7:47420733..47420758, - |
1.87e-124 | FFCP PHASE2:Hg19::chr17:7558857..7558903,+#_04f73ccdf2256b6c06946aad032bf846 | p@chr17:7558857..7558903, + |
1.87e-124 | FFCP PHASE1:Hg19::chr17:7558857..7558903,+#_04f73ccdf2256b6c06946aad032bf846 | p@chr17:7558857..7558903, + |
2.2e-124 | FFCP PHASE1:Hg19::chr1:110082487..110082535,+#_fd61f0bf77ed8879826d9c651b11896a | p1@GPR61 |
2.2e-124 | FFCP PHASE2:Hg19::chr1:110082487..110082535,+#_fd61f0bf77ed8879826d9c651b11896a | p1@GPR61 |
2.34e-124 | FFCP PHASE1:Hg19::chr6:29595998..29596020,-#_ddcbe9242233b8a468b1513a4716995f | p5@GABBR1 |
2.34e-124 | FFCP PHASE2:Hg19::chr6:29595998..29596020,-#_ddcbe9242233b8a468b1513a4716995f | p5@GABBR1 |
4.18e-124 | FFCP PHASE2:Hg19::chr16:72459772..72459794,+#_c6284fb829aed6308046bddbcbb4c428 | p2@uc002fch.1 |
4.18e-124 | FFCP PHASE1:Hg19::chr16:72459772..72459794,+#_c6284fb829aed6308046bddbcbb4c428 | p2@uc002fch.1 |
4.41e-124 | FFCP PHASE2:Hg19::chr5:11904100..11904112,-#_38c4a6e25efd093cffee79533fc0084b | p19@CTNND2 |
4.41e-124 | FFCP PHASE1:Hg19::chr5:11904100..11904112,-#_38c4a6e25efd093cffee79533fc0084b | p19@CTNND2 |
5.54e-124 | FFCP PHASE2:Hg19::chr4:46126093..46126106,-#_a294118a5fab2cf242f43ee2e827e030 | p3@GABRG1 |
5.54e-124 | FFCP PHASE1:Hg19::chr4:46126093..46126106,-#_a294118a5fab2cf242f43ee2e827e030 | p3@GABRG1 |
1.31e-123 | FFCP PHASE2:Hg19::chr18:24443122..24443142,-#_2887d0a05aa1c32da35b99a41d497864 | p5@AQP4 |
1.31e-123 | FFCP PHASE1:Hg19::chr18:24443122..24443142,-#_2887d0a05aa1c32da35b99a41d497864 | p5@AQP4 |
1.63e-123 | FFCP PHASE2:Hg19::chr17:36760961..36760976,-#_5e68234f076a55c9bce70822e934e4fd | p2@SRCIN1 |
1.63e-123 | FFCP PHASE1:Hg19::chr17:36760961..36760976,-#_5e68234f076a55c9bce70822e934e4fd | p2@SRCIN1 |
1.85e-123 | FFCP PHASE1:Hg19::chr2:210526233..210526258,+#_9de801b2ec85c0332bf1c6aaa16a3b16 | p9@MAP2 |
1.85e-123 | FFCP PHASE2:Hg19::chr2:210526233..210526258,+#_9de801b2ec85c0332bf1c6aaa16a3b16 | p9@MAP2 |
2.38e-123 | FFCP PHASE1:Hg19::chr5:161494521..161494557,+#_f0cc3a7f937c7a243372be20b891a210 | p7@GABRG2 |
2.38e-123 | FFCP PHASE2:Hg19::chr5:161494521..161494557,+#_f0cc3a7f937c7a243372be20b891a210 | p7@GABRG2 |
3.91e-123 | FFCP PHASE2:Hg19::chr1:156217805..156217817,-#_e084a53080c62f7f9a3a125e80938bdc | p2@PAQR6 |
3.91e-123 | FFCP PHASE1:Hg19::chr1:156217805..156217817,-#_e084a53080c62f7f9a3a125e80938bdc | p2@PAQR6 |
6.32e-123 | FFCP PHASE2:Hg19::chr2:73286294..73286310,-#_37153257531c54dc216abdf7a8072051 | p4@SFXN5 |
6.32e-123 | FFCP PHASE1:Hg19::chr2:73286294..73286310,-#_37153257531c54dc216abdf7a8072051 | p4@SFXN5 |