FFCP PHASE1:Mm9::chr12:88729139..88729197,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=20773 | |EntrezGene=20773 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=12 | |||
|TSSclassifier=NA | |||
|UniProt=P97363,Q542D6 | |UniProt=P97363,Q542D6 | ||
|association_with_transcript=0bp_to_ENSMUST00000167911,NM_011479,uc007oiw.1_5end | |association_with_transcript=0bp_to_ENSMUST00000167911,NM_011479,uc007oiw.1_5end | ||
|cluster_id=chr12:88729139..88729197,- | |||
|description=CAGE_peak_1_at_Sptlc2_5end | |description=CAGE_peak_1_at_Sptlc2_5end | ||
|id=chr12:88729139..88729197,- | |id=chr12:88729139..88729197,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!6.65e-10!59;UBERON:0000160!5.06e-09!43;UBERON:0000344!2.75e-08!15;UBERON:0004119!5.23e-08!130;UBERON:0000925!5.23e-08!130;UBERON:0006595!5.23e-08!130;UBERON:0001242!2.02e-07!13;UBERON:0000060!2.02e-07!13;UBERON:0001262!2.02e-07!13;UBERON:0004786!2.02e-07!13;UBERON:0001007!2.52e-07!128;UBERON:0001555!2.52e-07!128;UBERON:0007026!2.52e-07!128;UBERON:0004923!3.84e-07!24;UBERON:0004921!9.93e-07!126;UBERON:0004185!9.93e-07!126 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,3.11e-12,31;UBERON:0005409,3.12e-12,47;UBERON:0004119,1.07e-08,118;UBERON:0000925,1.07e-08,118;UBERON:0006595,1.07e-08,118;UBERON:0000344,2.75e-08,15;UBERON:0001007,5.68e-08,116;UBERON:0001555,5.68e-08,116;UBERON:0007026,5.68e-08,116;UBERON:0001242,2.02e-07,13;UBERON:0001262,2.02e-07,13;UBERON:0004786,2.02e-07,13;UBERON:0004921,2.42e-07,114;UBERON:0004923,3.84e-07,24 | |||
|phase1_expression=11.0502704502308,88.2907781327583,110.109815932268,126.430040326255,123.220349566801,39.7873874431179,39.7141489012394,8.00564605337773,21.96304065566,20.3636137900134,6.33506482434368,8.29630453551499,6.67682846731702,6.90621179110079,11.6588416635482,4.85940641735582,4.89693314689703,6.15151222448563,5.89592064504677,5.51706547337439,16.0731818385522,4.66667470644161,3.6567970479451,37.4382269336572,52.3053160833148,102.787521576589,92.6138291742011,60.7628876174207,179.952178225186,97.0315999575733,128.381965669421,3.17515336729816,1.84519436275371,0,14.731432607315,15.7922913090568,17.9669033510885,52.7349854728504,74.226857729761,51.828850653406,50.5879079706672,60.7910481613017,49.0365456561465,17.4996576986052,19.1602400004883,26.7978258156055,6.25913075478431,4.57852828398938,3.07560655828261,6.41618666945135,7.97922603264566,4.31257693094915,6.37573903019398,13.0565185562042,12.7715643674136,48.364773974758,30.3725446335082,55.1769138736863,4.65327859977075,4.7609188134483,8.87363964908651,7.11573517345177,8.00365316500025,13.498495759221,10.8775299882367,12.7886420690298,5.09320187881288,6.53171119046643,4.04389488003063,2.56511282830212,4.20649922702764,9.42648248532552,6.84692476950002,3.91970557487853,3.64212789869298,7.35375029288017,6.60695285996332,9.57655035638908,6.45147439676223,6.72620067423989,6.31264740856627,6.77187381723788,6.42120897703176,3.93933827022176,6.1119299110724,8.83885756421003,11.2473627831291,7.82877672466262,20.5217983932929,12.5448789777264,114.206608548461,24.0918685554788,34.6785380190953,3.2382191498269,9.09686984426737,8.51251085484938,11.2355536105401,14.827438064291,15.846946280775,18.0203183000274,13.239281459008,25.6652954828636,30.5766287647975,35.5533351576666,17.7522653629196,17.988550448732,14.6602089054287,27.5183150122935,28.7421050848361,30.4306385082891,11.7970022200972,18.5723941770406,20.7553947530453,24.5677904100775,32.3368944623188,22.7456530306713,117.664804641562,11.1341504828332,13.2691582792481,14.3972496453194,9.05450225687614,10.1823803158397,82.0123749359738,3.80615036115011,5.65506108396329,73.3161748448657,11.3824368280624,24.5960119707297,18.4251829255944,5.09288173976397,5.03250663100489,6.91098936620754,4.86708096538374,6.13717097592793,6.02585329222724,7.46309810111685,14.6648683944455,14.1823946495506,7.83440551144392,5.26104639716185,6.11566081924707,5.51765050640335,5.58192602396583,5.87748789559289,9.93332887609387,7.55870949680614,7.96464658757695,6.72628763921441,3.44908788692548,7.18603104637713,6.33424046990216,8.98702502953057,10.2877482213471,16.716103993064,18.5203922767149,6.56813080501028,30.1951670544691,31.9111404822247,32.3946389310976,9.73491130916859,8.67746421930056,8.28285482720668,8.75955521665278,10.231740050865,10.0273623376796,10.6965614585188,16.6329508867764,16.1136172466694,8.55711219550098,11.6558899496158,14.024904051433,13.3041988557052,14.2707574939183,16.238976670005,3.99550902271842,9.36431972651488,189.329962649716,83.8308296323435,2.98603550749328,6.50262681209228,14.1754207454303,20.7734030362043,30.0210359190575,34.6210639524858,56.4689583237969,53.8565581947516,52.0263882216558,44.7652062092589,37.2381406397519,62.9173586057955,56.4120310172952,66.9114678134674,5.50036912763937,7.08340778180319,10.1436962105772,9.77526373657508,13.3827216145662,17.5339549725796,16.8209188750524,18.1560482014911,16.0138702398202,22.7050781616113,11.858105083486,6.17326891149548,6.09332884850929,4.72210436008193,6.49152388443209,8.20002343158217,9.67578236769395,10.0693648107784,13.781494275878,16.748246204473,17.2521847832825,21.5841749647732,17.1620720213008,16.6702059445094,10.7638448113147,11.5786445127208,63.3703442271454,7.39016505904891,10.1038285394056,8.82674446030978,15.9589368836181,22.2783322397615,41.6576371550524,60.8816981316332,40.0393266029725,35.434350343804,40.5015112390017,53.0917139678991,50.5966996867074,67.2618122404029,21.1107797514981,44.6002660731342,11.3105782794378,12.9690270763224,8.83028244932856,7.2671245687166,13.9344703570174,11.8661335786055,6.94118082715765,5.0757036758563,7.75524231838076,8.12493913038677,8.02075226696619,11.6061377623421,7.69140333182299,7.01414058987149,6.7198922250909,5.14114106274891,8.51640511249612,8.01295216502649,15.8000350572969,14.5173708215831,6.63725691699814,9.22566417388929,9.67435382287203,9.24164890803901,8.85905678642318,11.6825356218692,35.9215327503827,16.7225515559653,16.3988794056972,8.21695570633122,11.5960469432499,4.12542172992747,3.74483566329167,6.48219938512717,5.82114077022395,7.28745919107414,8.6896714484714,8.74007206250146,9.54384319492302,10.656273219011,89.4099207722736,40.2480934641258,8.60060752414351,20.610781617685,24.5425928577776,13.8116598085477,16.2346387844266,16.7423717739962,53.9239547765224,8.52956389248344,10.2522528478712,10.9385040020508,18.5194527369712,6.96963290917357,5.46776910884101,8.92234875505438,5.94924504978494,8.39708713941948,7.32459861163446,66.8269432610579,7.27572785236611,7.72613975082025,18.7929293029934,27.5996550739099,36.4665481456117,44.6400986533757,46.4512421176388,64.6537176700553,98.6369946750544,6.83473244395618,5.6369293868419,5.68162874967119,7.2801735801123,12.8337784307071,11.2369046425626,7.26511339610346,11.0315804327009,8.33308063001281,14.0511521530453,6.52277126230216,5.47257011889944,4.74016680942267,5.87903124341476,6.26536838705446,7.14564526377873,5.72885426135941,6.35780335300048,5.28859977887863,5.31682297828478,3.63479219813331,4.03896075271499,3.93222122033678,5.36018344068638,5.48407497349878,5.61009130471531,32.6491752405904,11.3212836220773,8.61253023450967,17.6278847182282,18.5462010270903,73.9468953277657,18.3151624267265,25.7242054894879,19.5613120573792,8.471277639256,6.44455331110048,5.72895513439397,8.248952752497,6.85082519770642,3.7769694869485,6.07520250208625,5.85417564191487,7.25027854374727,6.73088405277366,2.49089634202024,8.37952234142165,8.70741389346084,10.4535888339366,4.19226325255965,7.53758384645058,12.6680634846921,10.3017528619447,13.1576875932644,15.6672271293554,11.660047794951,11.8834595073228,12.6416035084341,13.3172317002128,12.4634967633681,9.0495801343784,11.3566639425958,11.5745532278223,9.89006161927936,11.6287146906174,11.3146853287187,9.9386451449229,9.29901140794552,13.9532559967035,10.3520318456864,13.0306496153182,12.2561741824758,12.6273461490165,12.3581743599734,14.0285567914435,13.5243920661559,13.0025916735744,12.2769312950907,12.5498841360632,13.8892759906422,10.9916654292696,16.3752125911786,16.7599422157673,15.4943548975763,14.7796250810075,10.8977882741598 | |phase1_expression=11.0502704502308,88.2907781327583,110.109815932268,126.430040326255,123.220349566801,39.7873874431179,39.7141489012394,8.00564605337773,21.96304065566,20.3636137900134,6.33506482434368,8.29630453551499,6.67682846731702,6.90621179110079,11.6588416635482,4.85940641735582,4.89693314689703,6.15151222448563,5.89592064504677,5.51706547337439,16.0731818385522,4.66667470644161,3.6567970479451,37.4382269336572,52.3053160833148,102.787521576589,92.6138291742011,60.7628876174207,179.952178225186,97.0315999575733,128.381965669421,3.17515336729816,1.84519436275371,0,14.731432607315,15.7922913090568,17.9669033510885,52.7349854728504,74.226857729761,51.828850653406,50.5879079706672,60.7910481613017,49.0365456561465,17.4996576986052,19.1602400004883,26.7978258156055,6.25913075478431,4.57852828398938,3.07560655828261,6.41618666945135,7.97922603264566,4.31257693094915,6.37573903019398,13.0565185562042,12.7715643674136,48.364773974758,30.3725446335082,55.1769138736863,4.65327859977075,4.7609188134483,8.87363964908651,7.11573517345177,8.00365316500025,13.498495759221,10.8775299882367,12.7886420690298,5.09320187881288,6.53171119046643,4.04389488003063,2.56511282830212,4.20649922702764,9.42648248532552,6.84692476950002,3.91970557487853,3.64212789869298,7.35375029288017,6.60695285996332,9.57655035638908,6.45147439676223,6.72620067423989,6.31264740856627,6.77187381723788,6.42120897703176,3.93933827022176,6.1119299110724,8.83885756421003,11.2473627831291,7.82877672466262,20.5217983932929,12.5448789777264,114.206608548461,24.0918685554788,34.6785380190953,3.2382191498269,9.09686984426737,8.51251085484938,11.2355536105401,14.827438064291,15.846946280775,18.0203183000274,13.239281459008,25.6652954828636,30.5766287647975,35.5533351576666,17.7522653629196,17.988550448732,14.6602089054287,27.5183150122935,28.7421050848361,30.4306385082891,11.7970022200972,18.5723941770406,20.7553947530453,24.5677904100775,32.3368944623188,22.7456530306713,117.664804641562,11.1341504828332,13.2691582792481,14.3972496453194,9.05450225687614,10.1823803158397,82.0123749359738,3.80615036115011,5.65506108396329,73.3161748448657,11.3824368280624,24.5960119707297,18.4251829255944,5.09288173976397,5.03250663100489,6.91098936620754,4.86708096538374,6.13717097592793,6.02585329222724,7.46309810111685,14.6648683944455,14.1823946495506,7.83440551144392,5.26104639716185,6.11566081924707,5.51765050640335,5.58192602396583,5.87748789559289,9.93332887609387,7.55870949680614,7.96464658757695,6.72628763921441,3.44908788692548,7.18603104637713,6.33424046990216,8.98702502953057,10.2877482213471,16.716103993064,18.5203922767149,6.56813080501028,30.1951670544691,31.9111404822247,32.3946389310976,9.73491130916859,8.67746421930056,8.28285482720668,8.75955521665278,10.231740050865,10.0273623376796,10.6965614585188,16.6329508867764,16.1136172466694,8.55711219550098,11.6558899496158,14.024904051433,13.3041988557052,14.2707574939183,16.238976670005,3.99550902271842,9.36431972651488,189.329962649716,83.8308296323435,2.98603550749328,6.50262681209228,14.1754207454303,20.7734030362043,30.0210359190575,34.6210639524858,56.4689583237969,53.8565581947516,52.0263882216558,44.7652062092589,37.2381406397519,62.9173586057955,56.4120310172952,66.9114678134674,5.50036912763937,7.08340778180319,10.1436962105772,9.77526373657508,13.3827216145662,17.5339549725796,16.8209188750524,18.1560482014911,16.0138702398202,22.7050781616113,11.858105083486,6.17326891149548,6.09332884850929,4.72210436008193,6.49152388443209,8.20002343158217,9.67578236769395,10.0693648107784,13.781494275878,16.748246204473,17.2521847832825,21.5841749647732,17.1620720213008,16.6702059445094,10.7638448113147,11.5786445127208,63.3703442271454,7.39016505904891,10.1038285394056,8.82674446030978,15.9589368836181,22.2783322397615,41.6576371550524,60.8816981316332,40.0393266029725,35.434350343804,40.5015112390017,53.0917139678991,50.5966996867074,67.2618122404029,21.1107797514981,44.6002660731342,11.3105782794378,12.9690270763224,8.83028244932856,7.2671245687166,13.9344703570174,11.8661335786055,6.94118082715765,5.0757036758563,7.75524231838076,8.12493913038677,8.02075226696619,11.6061377623421,7.69140333182299,7.01414058987149,6.7198922250909,5.14114106274891,8.51640511249612,8.01295216502649,15.8000350572969,14.5173708215831,6.63725691699814,9.22566417388929,9.67435382287203,9.24164890803901,8.85905678642318,11.6825356218692,35.9215327503827,16.7225515559653,16.3988794056972,8.21695570633122,11.5960469432499,4.12542172992747,3.74483566329167,6.48219938512717,5.82114077022395,7.28745919107414,8.6896714484714,8.74007206250146,9.54384319492302,10.656273219011,89.4099207722736,40.2480934641258,8.60060752414351,20.610781617685,24.5425928577776,13.8116598085477,16.2346387844266,16.7423717739962,53.9239547765224,8.52956389248344,10.2522528478712,10.9385040020508,18.5194527369712,6.96963290917357,5.46776910884101,8.92234875505438,5.94924504978494,8.39708713941948,7.32459861163446,66.8269432610579,7.27572785236611,7.72613975082025,18.7929293029934,27.5996550739099,36.4665481456117,44.6400986533757,46.4512421176388,64.6537176700553,98.6369946750544,6.83473244395618,5.6369293868419,5.68162874967119,7.2801735801123,12.8337784307071,11.2369046425626,7.26511339610346,11.0315804327009,8.33308063001281,14.0511521530453,6.52277126230216,5.47257011889944,4.74016680942267,5.87903124341476,6.26536838705446,7.14564526377873,5.72885426135941,6.35780335300048,5.28859977887863,5.31682297828478,3.63479219813331,4.03896075271499,3.93222122033678,5.36018344068638,5.48407497349878,5.61009130471531,32.6491752405904,11.3212836220773,8.61253023450967,17.6278847182282,18.5462010270903,73.9468953277657,18.3151624267265,25.7242054894879,19.5613120573792,8.471277639256,6.44455331110048,5.72895513439397,8.248952752497,6.85082519770642,3.7769694869485,6.07520250208625,5.85417564191487,7.25027854374727,6.73088405277366,2.49089634202024,8.37952234142165,8.70741389346084,10.4535888339366,4.19226325255965,7.53758384645058,12.6680634846921,10.3017528619447,13.1576875932644,15.6672271293554,11.660047794951,11.8834595073228,12.6416035084341,13.3172317002128,12.4634967633681,9.0495801343784,11.3566639425958,11.5745532278223,9.89006161927936,11.6287146906174,11.3146853287187,9.9386451449229,9.29901140794552,13.9532559967035,10.3520318456864,13.0306496153182,12.2561741824758,12.6273461490165,12.3581743599734,14.0285567914435,13.5243920661559,13.0025916735744,12.2769312950907,12.5498841360632,13.8892759906422,10.9916654292696,16.3752125911786,16.7599422157673,15.4943548975763,14.7796250810075,10.8977882741598 | ||
|short_description=p1@Sptlc2 | |short_description=p1@Sptlc2 | ||
}} | }} |
Latest revision as of 23:38, 26 September 2015
Short description: | p1@Sptlc2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Sptlc2_5end |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | 0bp_to_ENSMUST00000167911, NM_011479, uc007oiw.1_5end |
EntrezGene: | Sptlc2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestine | 3.11e-12 | 31 |
gastrointestinal system | 3.12e-12 | 47 |
endoderm-derived structure | 1.07e-08 | 118 |
endoderm | 1.07e-08 | 118 |
presumptive endoderm | 1.07e-08 | 118 |
mucosa | 2.75e-08 | 15 |
digestive system | 5.68e-08 | 116 |
digestive tract | 5.68e-08 | 116 |
primitive gut | 5.68e-08 | 116 |
intestinal mucosa | 2.02e-07 | 13 |
wall of intestine | 2.02e-07 | 13 |
gastrointestinal system mucosa | 2.02e-07 | 13 |
subdivision of digestive tract | 2.42e-07 | 114 |
organ component layer | 3.84e-07 | 24 |