FFCP PHASE1:Mm9::chr19:24589295..24589302,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=105 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:24589295..24589302,- | |||
|description=CAGE_peak_at_chr19:24589295..24589302,- | |description=CAGE_peak_at_chr19:24589295..24589302,- | ||
|id=chr19:24589295..24589302,- | |id=chr19:24589295..24589302,- | ||
|ontology_enrichment_celltype=CL:0002563!5.12e-50!9;CL:0002251!5.12e-50!9;CL:0000239!3.32e-33!6;CL:0000677!3.32e-33!6;CL:0000212!3.32e-33!6;CL:0000584!3.32e-33!6;CL:0002076!1.19e-29!15;CL:0000075!1.96e-28!7;CL:0000066!4.90e-26!25;CL:0000223!5.39e-22!20;CL:0002250!2.89e-18!3;CL:0000063!5.75e-09!66;CL:0000473!2.18e-08!3;CL:0000627!2.18e-08!3;CL:0000682!2.18e-08!3;CL:0002321!8.56e-07!70;CL:0000220!8.56e-07!70 | |||
|ontology_enrichment_celltype_v019_2=CL:0002250,2.33e-44,3;CL:0002563,9.55e-41,9;CL:0002251,9.55e-41,9;CL:0002076,1.01e-24,15;CL:0000066,2.66e-21,25;CL:0000223,1.09e-18,20;CL:0000239,1.07e-10,6;CL:0000677,1.07e-10,6;CL:0000584,1.07e-10,6;CL:0000075,2.61e-09,7 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003350!5.12e-50!9;UBERON:0004808!5.12e-50!9;UBERON:0001277!5.12e-50!9;UBERON:0000344!1.05e-43!15;UBERON:0001242!4.71e-42!13;UBERON:0000060!4.71e-42!13;UBERON:0001262!4.71e-42!13;UBERON:0004786!4.71e-42!13;UBERON:0000485!9.12e-41!11;UBERON:0004923!7.63e-27!24;UBERON:0000160!7.08e-12!43;UBERON:0003929!5.47e-09!55;UBERON:0000490!6.77e-09!66;UBERON:0005409!2.69e-08!59;UBERON:0000064!9.01e-08!99;UBERON:0005911!6.86e-07!69 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003350,9.55e-41,9;UBERON:0004808,9.55e-41,9;UBERON:0001277,9.55e-41,9;UBERON:0000485,1.81e-33,11;UBERON:0001242,2.00e-28,13;UBERON:0001262,2.00e-28,13;UBERON:0004786,2.00e-28,13;UBERON:0000344,1.01e-24,15;UBERON:0004923,1.15e-15,24;UBERON:0000160,3.07e-12,31;UBERON:0005409,3.29e-08,47;UBERON:0003929,4.60e-07,55 | |||
|phase1_expression=0,0.348975407639361,0.909998478779072,0.30246421130683,0.500895729946347,1.17515490338323,1.86890112476421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22940928106717,1.14846392823004,0,0.430942465371778,0,0,0.221730510655305,0,0,0,6.35473563452804,1.16364251750945,5.3084032628216,0,0.7813353445238,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279182999001381,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0.348975407639361,0.909998478779072,0.30246421130683,0.500895729946347,1.17515490338323,1.86890112476421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22940928106717,1.14846392823004,0,0.430942465371778,0,0,0.221730510655305,0,0,0,6.35473563452804,1.16364251750945,5.3084032628216,0,0.7813353445238,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279182999001381,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr19:24589295..24589302,- | |short_description=p@chr19:24589295..24589302,- | ||
}} | }} |
Latest revision as of 10:19, 6 August 2015
Short description: | p@chr19:24589295..24589302, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr19:24589295..24589302, - |
Coexpression cluster: | MCL_coexpression_mm9:105 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal crypt stem cell | 2.33e-44 | 3 |
intestinal epithelial cell | 9.55e-41 | 9 |
epithelial cell of alimentary canal | 9.55e-41 | 9 |
endo-epithelial cell | 1.01e-24 | 15 |
epithelial cell | 2.66e-21 | 25 |
endodermal cell | 1.09e-18 | 20 |
brush border epithelial cell | 1.07e-10 | 6 |
gut absorptive cell | 1.07e-10 | 6 |
enterocyte | 1.07e-10 | 6 |
columnar/cuboidal epithelial cell | 2.61e-09 | 7 |
Ontology term | p-value | n |
---|---|---|
epithelium of mucosa | 9.55e-41 | 9 |
gastrointestinal system epithelium | 9.55e-41 | 9 |
intestinal epithelium | 9.55e-41 | 9 |
simple columnar epithelium | 1.81e-33 | 11 |
intestinal mucosa | 2.00e-28 | 13 |
wall of intestine | 2.00e-28 | 13 |
gastrointestinal system mucosa | 2.00e-28 | 13 |
mucosa | 1.01e-24 | 15 |
organ component layer | 1.15e-15 | 24 |
intestine | 3.07e-12 | 31 |
gastrointestinal system | 3.29e-08 | 47 |
gut epithelium | 4.60e-07 | 55 |