FFCP PHASE1:Mm9::chr15:38563187..38563194,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=58 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr15:38563187..38563194,- | |||
|description=CAGE_peak_at_chr15:38563187..38563194,- | |description=CAGE_peak_at_chr15:38563187..38563194,- | ||
|id=chr15:38563187..38563194,- | |id=chr15:38563187..38563194,- | ||
|ontology_enrichment_celltype=CL:0000473!7.39e-13!3;CL:0000627!7.39e-13!3;CL:0000682!7.39e-13!3;CL:0000239!6.49e-11!6;CL:0000677!6.49e-11!6;CL:0000212!6.49e-11!6;CL:0000584!6.49e-11!6;CL:0000075!2.30e-09!7;CL:0002563!2.73e-07!9;CL:0002251!2.73e-07!9;CL:0000066!4.56e-07!25 | |ontology_enrichment_celltype=CL:0000473!7.39e-13!3;CL:0000627!7.39e-13!3;CL:0000682!7.39e-13!3;CL:0000239!6.49e-11!6;CL:0000677!6.49e-11!6;CL:0000212!6.49e-11!6;CL:0000584!6.49e-11!6;CL:0000075!2.30e-09!7;CL:0002563!2.73e-07!9;CL:0002251!2.73e-07!9;CL:0000066!4.56e-07!25 | ||
|ontology_enrichment_celltype_v019_2=CL:0000682,2.53e-27,3;CL:0000239,1.10e-23,6;CL:0000677,1.10e-23,6;CL:0000584,1.10e-23,6;CL:0000075,2.26e-20,7;CL:0000066,4.63e-17,25;CL:0002563,6.05e-16,9;CL:0002251,6.05e-16,9;CL:0000473,4.06e-12,7;CL:0002076,1.03e-09,15;CL:0000223,2.34e-07,20 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!2.94e-12!15;UBERON:0002465!3.02e-12!3;UBERON:0002370!4.43e-09!23;UBERON:0000974!4.43e-09!23;UBERON:0004807!4.43e-09!23;UBERON:0005058!4.43e-09!23;UBERON:0003351!4.43e-09!23;UBERON:0009113!4.43e-09!23;UBERON:0003295!4.43e-09!23;UBERON:0009722!4.43e-09!23;UBERON:0005562!4.43e-09!23;UBERON:0007690!4.43e-09!23;UBERON:0001962!4.80e-09!2;UBERON:0001961!4.80e-09!2;UBERON:0001744!4.80e-09!2;UBERON:0006562!1.18e-08!24;UBERON:0003408!1.18e-08!24;UBERON:0001557!1.18e-08!24;UBERON:0001042!1.18e-08!24;UBERON:0008814!1.18e-08!24;UBERON:0009145!1.18e-08!24;UBERON:0003929!9.97e-08!55;UBERON:0000072!1.42e-07!27;UBERON:0002193!1.81e-07!48;UBERON:0001242!1.82e-07!13;UBERON:0000060!1.82e-07!13;UBERON:0001262!1.82e-07!13;UBERON:0004786!1.82e-07!13;UBERON:0004923!2.55e-07!24;UBERON:0003350!2.73e-07!9;UBERON:0004808!2.73e-07!9;UBERON:0001277!2.73e-07!9;UBERON:0004177!5.64e-07!29;UBERON:0000064!7.55e-07!99;UBERON:0005911!8.18e-07!69 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,3.42e-28,15;UBERON:0001962,1.30e-18,2;UBERON:0001961,1.30e-18,2;UBERON:0001744,1.30e-18,2;UBERON:0004923,1.42e-17,24;UBERON:0001242,7.89e-17,13;UBERON:0001262,7.89e-17,13;UBERON:0004786,7.89e-17,13;UBERON:0003350,6.05e-16,9;UBERON:0004808,6.05e-16,9;UBERON:0001277,6.05e-16,9;UBERON:0000485,4.05e-13,11;UBERON:0002465,9.50e-13,3;UBERON:0003199,3.04e-10,1;UBERON:0000160,4.14e-07,31 | |||
|phase1_expression=0,3.83872948403297,5.91499011206397,0,0,1.6787927191189,4.90586545250604,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.31979541542198,5.04700418347774,5.16808767703518,3.4460959692726,9.69620547086501,0,0,1.33038306393183,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0.258937883647172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167506257441816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0.329940245945071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,0,0,0,0.358053391334963,0.596044064343795,0.360586348559907,0,0.100966449948148,0,0,0.38983152295901,0.192423683280659,0.350630706544707,0,0,0,0,0,0,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,3.83872948403297,5.91499011206397,0,0,1.6787927191189,4.90586545250604,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.31979541542198,5.04700418347774,5.16808767703518,3.4460959692726,9.69620547086501,0,0,1.33038306393183,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0.258937883647172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167506257441816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0.329940245945071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,0,0,0,0.358053391334963,0.596044064343795,0.360586348559907,0,0.100966449948148,0,0,0.38983152295901,0.192423683280659,0.350630706544707,0,0,0,0,0,0,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr15:38563187..38563194,- | |short_description=p@chr15:38563187..38563194,- | ||
}} | }} |
Latest revision as of 05:46, 5 August 2015
Short description: | p@chr15:38563187..38563194, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr15:38563187..38563194, - |
Coexpression cluster: | MCL_coexpression_mm9:58 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
M cell of gut | 2.53e-27 | 3 |
brush border epithelial cell | 1.10e-23 | 6 |
gut absorptive cell | 1.10e-23 | 6 |
enterocyte | 1.10e-23 | 6 |
columnar/cuboidal epithelial cell | 2.26e-20 | 7 |
epithelial cell | 4.63e-17 | 25 |
intestinal epithelial cell | 6.05e-16 | 9 |
epithelial cell of alimentary canal | 6.05e-16 | 9 |
defensive cell | 4.06e-12 | 7 |
endo-epithelial cell | 1.03e-09 | 15 |
endodermal cell | 2.34e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
mucosa | 3.42e-28 | 15 |
gut-associated lymphoid tissue | 1.30e-18 | 2 |
mucosa-associated lymphoid tissue | 1.30e-18 | 2 |
lymphoid tissue | 1.30e-18 | 2 |
organ component layer | 1.42e-17 | 24 |
intestinal mucosa | 7.89e-17 | 13 |
wall of intestine | 7.89e-17 | 13 |
gastrointestinal system mucosa | 7.89e-17 | 13 |
epithelium of mucosa | 6.05e-16 | 9 |
gastrointestinal system epithelium | 6.05e-16 | 9 |
intestinal epithelium | 6.05e-16 | 9 |
simple columnar epithelium | 4.05e-13 | 11 |
lymphoid system | 9.50e-13 | 3 |
egg chamber | 3.04e-10 | 1 |
intestine | 4.14e-07 | 31 |