FFCP PHASE1:Mm9::chr1:19199095..19199114,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=21419 | |EntrezGene=21419 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=496 | |||
|TSSclassifier=NA | |||
|UniProt=Q8CE69 | |UniProt=Q8CE69 | ||
|association_with_transcript=54bp_to_ENSMUST00000166387_5end | |association_with_transcript=54bp_to_ENSMUST00000166387_5end | ||
|cluster_id=chr1:19199095..19199114,+ | |||
|description=CAGE_peak_5_at_Tfap2b_5end | |description=CAGE_peak_5_at_Tfap2b_5end | ||
|id=chr1:19199095..19199114,+ | |id=chr1:19199095..19199114,+ | ||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000970!3.08e-09!9;UBERON:0000019!3.08e-09!9;UBERON:0000047!3.08e-09!9;UBERON:0004088!3.08e-09!9;UBERON:0002104!3.08e-09!9;UBERON:0001456!3.08e-09!9;UBERON:0003072!3.08e-09!9;UBERON:0003071!3.08e-09!9;UBERON:0004128!3.08e-09!9;UBERON:0004121!3.52e-09!102;UBERON:0000924!3.52e-09!102;UBERON:0006601!3.52e-09!102;UBERON:0001444!1.99e-08!11;UBERON:0005085!4.98e-08!13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000970,7.84e-14,9;UBERON:0000019,7.84e-14,9;UBERON:0000047,7.84e-14,9;UBERON:0010312,7.84e-14,9;UBERON:0004088,7.84e-14,9;UBERON:0002104,7.84e-14,9;UBERON:0001456,7.84e-14,9;UBERON:0003072,7.84e-14,9;UBERON:0004128,7.84e-14,9;UBERON:0003071,7.84e-14,9;UBERON:0001444,6.02e-13,11;UBERON:0005085,1.22e-12,13;UBERON:0000033,1.56e-10,13;UBERON:0002102,2.77e-10,7;UBERON:0004710,2.77e-10,7;UBERON:0005419,2.77e-10,7;UBERON:0005417,2.77e-10,7;UBERON:0005729,2.77e-10,7;UBERON:0000020,9.14e-10,12;UBERON:0001032,9.14e-10,12;UBERON:0004456,9.14e-10,12;UBERON:0010708,8.25e-09,8;UBERON:0003102,1.04e-08,22;UBERON:0000014,8.58e-08,5;UBERON:0001003,8.58e-08,5;UBERON:0002097,8.58e-08,5;UBERON:0002199,8.58e-08,5;UBERON:0007029,8.58e-08,5;UBERON:0007376,8.58e-08,5;UBERON:0002416,8.58e-08,5;UBERON:0007383,8.58e-08,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279972843250725,0,0,0,0,0,0,0,31.3590514332377,32.268449735594,25.3532561402472,0.677689064138264,1.77858959222228,0,0,0,0.299600110518405,0,0,0.135005938331691,0,0.856952953211411,2.20868540951614,0,0,0,1.10115880999389,0.127687338085188,0.307213066512487,1.84640802822271,7.04454855738554,0.52091337055676,0.279182999001381,0,0,3.83017161115768,1.99320353118744,4.28718725398191,0,0.0755715601067855,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0,0.29688427812965,0.346970653532272,0.304465478312141,0.230615497256059,0.452167921657868,0.823120949949934,0.251333182659351,0,0,0,0,0,0,0,2.34224637609238,1.67557365450764,0,0,0,0,2.09706895166752,0,0,0.173824320192276,0,0.41557608911912,0.324482526135515,0,0.124406970610093,2.0217820674694,9.04899980311838,2.99277018814219,2.06911893990126,4.86167750474443,5.87748789559289,9.32100038373192,16.9110110776002,16.585205247072,17.3331258395141,1.29340795759705,3.78212160335639,9.14945845652534,4.60311038097907,6.95118123063995,4.179025998266,4.93877127379064,0,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0,0,0.102904612379284,0,0,0,0,0.128867461322093,0,0,0,0,0,0,0.198956472041151,0,0,0,0,0,0.456994050438915,1.1270773567308,0.407302655690628,0.387904974335251,0.771494018793504,0.885311519739602,0.738050739898011,0.470996183524124,0.740382983530803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167506257441816,0,0,0,0,0,0,0,0,0,0,1.96705709207614,1.10374698521893,0.321101179975584,0.35163505977661,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0,0.857348140126369,0.532020700926821,0.891844088010353,0.329098041204242,0,0,0,0,7.09010887648364,2.9063596805263,3.19658502119226,3.46179797609096,3.44695889464629,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24267862617385,0,0,0,0,0,0,0,0,0,0,0,0,0.202725215290164,0,0,0,0,0.120195449519969,0.147689527174577,0,0.0762068066549998,0.100826185136841,0.194915761479505,0.0962118416403295,0.233753804363138,0,0,0,0,0,0,0,0,0,0,0.460325236507177,0,0,0,0,0,0,0,0,2.28332164685189,1.59609949360412,1.70733605754134,1.45864030240976,2.72497111416377,0.919217542250071,1.55572709461131,1.23621034343337,0.64183841918363,0.758091635291392,1.01391719956096,1.13175804831646,1.03005658216871,1.85672941974121,1.26358031702349,1.90517476513229,1.27472758539341,1.35036454324594,0.412085900803307,1.47198920134397,1.37147700954166,1.4198064492747,1.43061713968393,0.872078499793971,1.31753132581463,1.77690676572521,0.914639864363863,0.526139422875686,1.22223702461276,1.68342681497322,1.30498519936592,0.689531376628944,0.409231043169689,0.77468420592983,1.92906610981141,4.49659040288303,1.63752125911786,1.71896843238639,0.956441660344217,1.10295709559758,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279972843250725,0,0,0,0,0,0,0,31.3590514332377,32.268449735594,25.3532561402472,0.677689064138264,1.77858959222228,0,0,0,0.299600110518405,0,0,0.135005938331691,0,0.856952953211411,2.20868540951614,0,0,0,1.10115880999389,0.127687338085188,0.307213066512487,1.84640802822271,7.04454855738554,0.52091337055676,0.279182999001381,0,0,3.83017161115768,1.99320353118744,4.28718725398191,0,0.0755715601067855,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0,0.29688427812965,0.346970653532272,0.304465478312141,0.230615497256059,0.452167921657868,0.823120949949934,0.251333182659351,0,0,0,0,0,0,0,2.34224637609238,1.67557365450764,0,0,0,0,2.09706895166752,0,0,0.173824320192276,0,0.41557608911912,0.324482526135515,0,0.124406970610093,2.0217820674694,9.04899980311838,2.99277018814219,2.06911893990126,4.86167750474443,5.87748789559289,9.32100038373192,16.9110110776002,16.585205247072,17.3331258395141,1.29340795759705,3.78212160335639,9.14945845652534,4.60311038097907,6.95118123063995,4.179025998266,4.93877127379064,0,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0,0,0.102904612379284,0,0,0,0,0.128867461322093,0,0,0,0,0,0,0.198956472041151,0,0,0,0,0,0.456994050438915,1.1270773567308,0.407302655690628,0.387904974335251,0.771494018793504,0.885311519739602,0.738050739898011,0.470996183524124,0.740382983530803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167506257441816,0,0,0,0,0,0,0,0,0,0,1.96705709207614,1.10374698521893,0.321101179975584,0.35163505977661,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0,0.857348140126369,0.532020700926821,0.891844088010353,0.329098041204242,0,0,0,0,7.09010887648364,2.9063596805263,3.19658502119226,3.46179797609096,3.44695889464629,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24267862617385,0,0,0,0,0,0,0,0,0,0,0,0,0.202725215290164,0,0,0,0,0.120195449519969,0.147689527174577,0,0.0762068066549998,0.100826185136841,0.194915761479505,0.0962118416403295,0.233753804363138,0,0,0,0,0,0,0,0,0,0,0.460325236507177,0,0,0,0,0,0,0,0,2.28332164685189,1.59609949360412,1.70733605754134,1.45864030240976,2.72497111416377,0.919217542250071,1.55572709461131,1.23621034343337,0.64183841918363,0.758091635291392,1.01391719956096,1.13175804831646,1.03005658216871,1.85672941974121,1.26358031702349,1.90517476513229,1.27472758539341,1.35036454324594,0.412085900803307,1.47198920134397,1.37147700954166,1.4198064492747,1.43061713968393,0.872078499793971,1.31753132581463,1.77690676572521,0.914639864363863,0.526139422875686,1.22223702461276,1.68342681497322,1.30498519936592,0.689531376628944,0.409231043169689,0.77468420592983,1.92906610981141,4.49659040288303,1.63752125911786,1.71896843238639,0.956441660344217,1.10295709559758,0 | ||
|short_description=p5@Tfap2b | |short_description=p5@Tfap2b | ||
}} | }} |
Latest revision as of 23:48, 26 September 2015
Short description: | p5@Tfap2b |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Tfap2b_5end |
Coexpression cluster: | MCL_coexpression_mm9:496 |
Association with transcript: | 54bp_to_ENSMUST00000166387_5end |
EntrezGene: | Tfap2b |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
eye | 7.84e-14 | 9 |
camera-type eye | 7.84e-14 | 9 |
simple eye | 7.84e-14 | 9 |
immature eye | 7.84e-14 | 9 |
ocular region | 7.84e-14 | 9 |
visual system | 7.84e-14 | 9 |
face | 7.84e-14 | 9 |
optic cup | 7.84e-14 | 9 |
optic vesicle | 7.84e-14 | 9 |
eye primordium | 7.84e-14 | 9 |
subdivision of head | 6.02e-13 | 11 |
ectodermal placode | 1.22e-12 | 13 |
head | 1.56e-10 | 13 |
forelimb | 2.77e-10 | 7 |
pectoral appendage | 2.77e-10 | 7 |
pectoral appendage bud | 2.77e-10 | 7 |
forelimb bud | 2.77e-10 | 7 |
forelimb/pectoral fin field | 2.77e-10 | 7 |
sense organ | 9.14e-10 | 12 |
sensory system | 9.14e-10 | 12 |
entire sense organ system | 9.14e-10 | 12 |
pectoral complex | 8.25e-09 | 8 |
surface structure | 1.04e-08 | 22 |
zone of skin | 8.58e-08 | 5 |
skin epidermis | 8.58e-08 | 5 |
skin of body | 8.58e-08 | 5 |
integument | 8.58e-08 | 5 |
surface | 8.58e-08 | 5 |
outer epithelium | 8.58e-08 | 5 |
integumental system | 8.58e-08 | 5 |
enveloping layer of ectoderm | 8.58e-08 | 5 |