FFCP PHASE1:Hg19::chr12:127256858..127256871,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=30bp_to_ENST00000542248_5end | |association_with_transcript=30bp_to_ENST00000542248_5end | ||
|cluster_id=chr12:127256858..127256871,- | |||
|coexpression_cluster_id=C429 | |||
|description=CAGE_peak_1_at_ENST00000542248_5end | |description=CAGE_peak_1_at_ENST00000542248_5end | ||
|id=chr12:127256858..127256871,- | |id=chr12:127256858..127256871,- | ||
|ontology_enrichment_celltype=CL:0000838!4.70e-11!52;CL:0000542!9.99e-11!53;CL:0000051!9.99e-11!53;CL:0000791!1.65e-10!18;CL:0000789!1.65e-10!18;CL:0002420!1.65e-10!18;CL:0002419!1.65e-10!18;CL:0000790!1.65e-10!18;CL:0000084!1.34e-09!25;CL:0000827!1.34e-09!25;CL:0000625!2.31e-07!11;CL:0000623!5.77e-07!3;CL:0000825!5.77e-07!3 | |ontology_enrichment_celltype=CL:0000838!4.70e-11!52;CL:0000542!9.99e-11!53;CL:0000051!9.99e-11!53;CL:0000791!1.65e-10!18;CL:0000789!1.65e-10!18;CL:0002420!1.65e-10!18;CL:0002419!1.65e-10!18;CL:0000790!1.65e-10!18;CL:0000084!1.34e-09!25;CL:0000827!1.34e-09!25;CL:0000625!2.31e-07!11;CL:0000623!5.77e-07!3;CL:0000825!5.77e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000623;4.31e-25;3!CL:0000319;1.18e-19;1!CL:0000895;2.97e-19;1!CL:0000624;6.12e-13;6!CL:0000159;1.64e-10;2!CL:0002535;2.60e-10;2!CL:0000898;2.71e-07;3!CL:0000767;2.71e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000623,3.38e-25,3;CL:0000825,3.38e-25,3;CL:0000319,1.30e-19,1;CL:0000810,3.91e-19,1;CL:0000895,3.91e-19,1;CL:0002436,3.91e-19,1;CL:0002427,3.91e-19,1;CL:0002428,3.91e-19,1;CL:0002429,3.91e-19,1;CL:0002433,3.91e-19,1;CL:0002431,3.91e-19,1;CL:0002432,3.91e-19,1;CL:0000624,7.78e-13,6;CL:0000159,1.72e-10,2;CL:0002535,2.07e-10,2;CL:0000893,2.99e-10,2;CL:0002489,2.99e-10,2;CL:0000809,2.99e-10,2;CL:0000808,2.99e-10,2;CL:0000894,2.99e-10,2;CL:0000806,2.99e-10,2;CL:0000807,2.99e-10,2;CL:0000805,2.99e-10,2;CL:0002425,2.99e-10,2;CL:0000767,2.79e-07,3;CL:0000898,2.97e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002427;2.97e-19;1!CL:0002425;2.60e-10;2 | |||
|ontology_enrichment_disease=DOID:120!4.70e-09!27;DOID:193!3.46e-08!29;DOID:1749!8.51e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:3030;1.18e-19;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3030,1.30e-19,1 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0006955;2.60e-10;2!UBERON:0004801;2.60e-10;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006955,2.07e-10,2;UBERON:0004801,2.07e-10,2;UBERON:0009722,1.51e-07,11;UBERON:0007690,1.51e-07,11 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821005894499457,0,0,1.15148819429164,0.309632246632152,0,0,0,0,0,0,0,0.802177789880567,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.35426486594342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.574752439954483,0,0,0,0.587237189370939,0.382273228125229,0,0.560508562981536,0,0,0,1.02800749499755,0,0,0.473447805734733,0,0.222820913770347,0.589211814949674,0.443067789167242,0.270803863765016,0,0.260118695119756,0,0,0,0,0,0,0,1.14966148080576,0,0,0,0.651083453856419,0,0.150575119077773,0.511946444617674,0,0.473554504088034,0,0.403213486449465,0.802320587350522,0.579297615531196,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.312160076830321,0,0.149448680551801,0,0,0,0.204154171254893,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257640540045629,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325736184293735,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0.179060963239896,0.560425719967636,0.788123040807709,1.50939302401662,2.95188983443421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234282829985426,0,0,0,0,0,0,0,0,0,0,0.426910231213777,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0.177561725313127,0,0,0,0,0,0,0,0,0.262248829918848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.640986253728404,0.082509499920588,0,0,0,0.290012154876366,0,0,0,0.107420244868274,0.145016693914229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0.329294892959902,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0.476463550915578,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211673582723883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439524537815682,0,0,0,0,0,0,0,0,7.90291805662632,0,0,0,0,0,0.20453736500431,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0.341380344856499,0.254253650292766,0,0,0,0,0,0,0,0,0,0,0.10893846351899,0,0,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0.167821586975843,0,0,0,0.163232808159148,0,0,0,0,0,0.296521128680622,0,0.104421949505455,0,0,0,0,0,0,0,0,0,0.063186579628488,0.150323419414493,0.103688191397247,0,0,0.313932918407225,0,0.569219092059585,0,0,0.0979923974143777,1.82824333818845,0,0,0.0967563312890851,0,0,0,0,0,0.137041924646751,0.993573058514948,0,0,0.160317640503067,0,0,0,0,0,0,1.98804056904692,0,0,0,0,0.577901179803038,0,0,0,0,0.525774708558629,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0.191915197319445,0,0,0,0,0,0,0,0,0.340776043570843,0,0,0,0,0,0,0,0.106787412567695,0,0,0.496166021811951,0,0.243585196761792,0,0.544017803369474,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149254802886874,0.233713309847224,0,0.947015026375446,0.50313580350515,0,0,0,0,0,0,0.449803112163605,0.155262956876259,0.414706207840855,0,0.521745061811734,0.150257608997218,0,0.406870733204662,0.545545977607678,0.214821114084977,0,0,0,0,0,0,0.192619830407303,0.214441591374926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.21195617878347,0,0.19998739585493,0,0,0.567515953566836,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.981477185010256,0,0,0.231051332300676,0,0,0,0,1.0085253435176,0,0,0,0.295712172434091,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0,0.230467975111559,0,0,0,0.118193840883968,0.222462803784138,0,0,0,0,0,0,0.0714765441766563,0,0,0.173858272302579,0,0,0,0,0,0,0,0,0.22910686854405,0.31020638566432,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150962843566674,0.0771741581079447,0,0,0,0,0,0,0,0,0,0,0,0.357107877211315,0,0.641930933513346,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224263725161227,0,0,0,0,0.134704106029175,0,0,0.488419611665847,0.426909383510862,0,0,0,0,0,0,0.201273793591026,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821005894499457,0,0,1.15148819429164,0.309632246632152,0,0,0,0,0,0,0,0.802177789880567,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.35426486594342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.574752439954483,0,0,0,0.587237189370939,0.382273228125229,0,0.560508562981536,0,0,0,1.02800749499755,0,0,0.473447805734733,0,0.222820913770347,0.589211814949674,0.443067789167242,0.270803863765016,0,0.260118695119756,0,0,0,0,0,0,0,1.14966148080576,0,0,0,0.651083453856419,0,0.150575119077773,0.511946444617674,0,0.473554504088034,0,0.403213486449465,0.802320587350522,0.579297615531196,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.312160076830321,0,0.149448680551801,0,0,0,0.204154171254893,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257640540045629,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325736184293735,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0.179060963239896,0.560425719967636,0.788123040807709,1.50939302401662,2.95188983443421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234282829985426,0,0,0,0,0,0,0,0,0,0,0.426910231213777,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0.177561725313127,0,0,0,0,0,0,0,0,0.262248829918848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.640986253728404,0.082509499920588,0,0,0,0.290012154876366,0,0,0,0.107420244868274,0.145016693914229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0.329294892959902,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0.476463550915578,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211673582723883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439524537815682,0,0,0,0,0,0,0,0,7.90291805662632,0,0,0,0,0,0.20453736500431,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0.341380344856499,0.254253650292766,0,0,0,0,0,0,0,0,0,0,0.10893846351899,0,0,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0.167821586975843,0,0,0,0.163232808159148,0,0,0,0,0,0.296521128680622,0,0.104421949505455,0,0,0,0,0,0,0,0,0,0.063186579628488,0.150323419414493,0.103688191397247,0,0,0.313932918407225,0,0.569219092059585,0,0,0.0979923974143777,1.82824333818845,0,0,0.0967563312890851,0,0,0,0,0,0.137041924646751,0.993573058514948,0,0,0.160317640503067,0,0,0,0,0,0,1.98804056904692,0,0,0,0,0.577901179803038,0,0,0,0,0.525774708558629,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0.191915197319445,0,0,0,0,0,0,0,0,0.340776043570843,0,0,0,0,0,0,0,0.106787412567695,0,0,0.496166021811951,0,0.243585196761792,0,0.544017803369474,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149254802886874,0.233713309847224,0,0.947015026375446,0.50313580350515,0,0,0,0,0,0,0.449803112163605,0.155262956876259,0.414706207840855,0,0.521745061811734,0.150257608997218,0,0.406870733204662,0.545545977607678,0.214821114084977,0,0,0,0,0,0,0.192619830407303,0.214441591374926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.21195617878347,0,0.19998739585493,0,0,0.567515953566836,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.981477185010256,0,0,0.231051332300676,0,0,0,0,1.0085253435176,0,0,0,0.295712172434091,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0,0.230467975111559,0,0,0,0.118193840883968,0.222462803784138,0,0,0,0,0,0,0.0714765441766563,0,0,0.173858272302579,0,0,0,0,0,0,0,0,0.22910686854405,0.31020638566432,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150962843566674,0.0771741581079447,0,0,0,0,0,0,0,0,0,0,0,0.357107877211315,0,0.641930933513346,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224263725161227,0,0,0,0,0.134704106029175,0,0,0.488419611665847,0.426909383510862,0,0,0,0,0,0,0.201273793591026,0 | ||
|short_description=p1@ENST00000542248 | |short_description=p1@ENST00000542248 | ||
}} | }} |
Latest revision as of 06:35, 24 July 2015
Short description: | p1@ENST00000542248 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000542248_5end |
Coexpression cluster: | C429_anaplastic_Mast_clear_Neutrophils_squamous_Eosinophils_oral |
Association with transcript: | 30bp_to_ENST00000542248_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
natural killer cell | 3.38e-25 | 3 |
pro-NK cell | 3.38e-25 | 3 |
mucus secreting cell | 1.30e-19 | 1 |
CD4-positive, alpha-beta thymocyte | 3.91e-19 | 1 |
naive thymus-derived CD4-positive, alpha-beta T cell | 3.91e-19 | 1 |
mature CD4 single-positive thymocyte | 3.91e-19 | 1 |
resting double-positive thymocyte | 3.91e-19 | 1 |
double-positive blast | 3.91e-19 | 1 |
CD69-positive double-positive thymocyte | 3.91e-19 | 1 |
CD69-positive, CD4-positive single-positive thymocyte | 3.91e-19 | 1 |
CD4-positive, CD8-intermediate double-positive thymocyte | 3.91e-19 | 1 |
CD24-positive, CD4 single-positive thymocyte | 3.91e-19 | 1 |
CD4-positive, alpha-beta T cell | 7.78e-13 | 6 |
seromucus secreting cell | 1.72e-10 | 2 |
epithelial cell of cervix | 2.07e-10 | 2 |
thymocyte | 2.99e-10 | 2 |
double negative thymocyte | 2.99e-10 | 2 |
double-positive, alpha-beta thymocyte | 2.99e-10 | 2 |
DN4 thymocyte | 2.99e-10 | 2 |
DN1 thymic pro-T cell | 2.99e-10 | 2 |
DN2 thymocyte | 2.99e-10 | 2 |
DN3 thymocyte | 2.99e-10 | 2 |
immature single positive thymocyte | 2.99e-10 | 2 |
early T lineage precursor | 2.99e-10 | 2 |
basophil | 2.79e-07 | 3 |
naive T cell | 2.97e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
uterine epithelium | 2.07e-10 | 2 |
cervix epithelium | 2.07e-10 | 2 |
entire pharyngeal arch endoderm | 1.51e-07 | 11 |
early pharyngeal endoderm | 1.51e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
mucinous adenocarcinoma | 1.30e-19 | 1 |