FFCP PHASE1:Hg19::chr12:12966304..12966315,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51202 | |EntrezGene=51202 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18682 | |HGNC=18682 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=12bp_to_ENST00000542123_5end | |association_with_transcript=12bp_to_ENST00000542123_5end | ||
|cluster_id=chr12:12966304..12966315,+ | |||
|description=CAGE_peak_3_at_DDX47_5end | |description=CAGE_peak_3_at_DDX47_5end | ||
|id=chr12:12966304..12966315,+ | |id=chr12:12966304..12966315,+ | ||
|ontology_enrichment_celltype=CL:0000012!3.91e-23!682;CL:0000548!3.77e-22!679;CL:0000004!3.77e-22!679;CL:0000255!3.77e-22!679;CL:0000003!7.48e-16!722;CL:0000063!4.01e-11!578;CL:0000144!8.03e-11!625;CL:0000066!9.69e-11!254;CL:0000077!2.18e-09!19;CL:0000076!1.98e-08!62;CL:0002321!3.90e-08!248;CL:0000220!5.98e-08!246 | |ontology_enrichment_celltype=CL:0000012!3.91e-23!682;CL:0000548!3.77e-22!679;CL:0000004!3.77e-22!679;CL:0000255!3.77e-22!679;CL:0000003!7.48e-16!722;CL:0000063!4.01e-11!578;CL:0000144!8.03e-11!625;CL:0000066!9.69e-11!254;CL:0000077!2.18e-09!19;CL:0000076!1.98e-08!62;CL:0002321!3.90e-08!248;CL:0000220!5.98e-08!246 | ||
|ontology_enrichment_celltype_v019=CL:0000077;3.87e-10;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,7.82e-13,253;CL:0000077,1.60e-10,19;CL:0000076,1.83e-08,63;CL:0002321,5.11e-07,250 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!3.55e-17!106;DOID:0050687!1.95e-15!143;DOID:14566!1.66e-13!239;DOID:162!9.83e-13!235;DOID:1749!7.38e-08!14 | |||
|ontology_enrichment_disease_v019=DOID:1749;1.75e-09;14 | |||
|ontology_enrichment_disease_v019_2=DOID:305,2.59e-16,106;DOID:0050687,8.99e-14,143;DOID:14566,8.76e-11,239;DOID:162,2.73e-10,235;DOID:1749,2.76e-09,14 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;1.57e-07;9!UBERON:0001557;1.57e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,1.59e-07,9 | |||
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| ||
|short_description=p3@DDX47 | |short_description=p3@DDX47 | ||
}} | }} |
Latest revision as of 07:59, 17 September 2015
Short description: | p3@DDX47 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_DDX47_5end |
Coexpression cluster: | NA |
Association with transcript: | 12bp_to_ENST00000542123_5end |
EntrezGene: | DDX47 |
HGNC: | 18682 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 7.82e-13 | 253 |
mesothelial cell | 1.60e-10 | 19 |
squamous epithelial cell | 1.83e-08 | 63 |
embryonic cell | 5.11e-07 | 250 |
Ontology term | p-value | n |
---|---|---|
larynx | 1.59e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 2.59e-16 | 106 |
cell type cancer | 8.99e-14 | 143 |
disease of cellular proliferation | 8.76e-11 | 239 |
cancer | 2.73e-10 | 235 |
squamous cell carcinoma | 2.76e-09 | 14 |