FFCP PHASE1:Hg19::chr12:28125953..28125964,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5744 | |EntrezGene=5744 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9607 | |HGNC=9607 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-315bp_to_ENST00000545234_5end | |association_with_transcript=-315bp_to_ENST00000545234_5end | ||
|cluster_id=chr12:28125953..28125964,- | |||
|coexpression_cluster_id=C1109 | |||
|description=CAGE_peak_17_at_PTHLH_5end | |description=CAGE_peak_17_at_PTHLH_5end | ||
|id=chr12:28125953..28125964,- | |id=chr12:28125953..28125964,- | ||
|ontology_enrichment_celltype=CL:0000244!2.72e-26!4;CL:0000731!2.72e-26!4;CL:0002076!6.45e-25!43;CL:0000066!1.14e-17!254;CL:0000223!2.15e-17!59;CL:0002159!1.25e-16!13;CL:0002368!1.94e-16!13;CL:0000317!1.04e-13!2;CL:1000448!1.04e-13!2;CL:0002308!1.04e-13!2;CL:0002140!1.04e-13!2;CL:0000362!1.84e-12!8;CL:0002251!4.58e-10!21;CL:0000240!1.25e-09!6;CL:0000311!1.25e-09!6;CL:0000079!1.25e-09!6;CL:0000237!1.25e-09!6;CL:0000036!1.25e-09!6;CL:0000357!1.25e-09!6;CL:0000114!1.25e-09!6;CL:0002166!2.15e-09!3;CL:0002621!3.38e-09!3;CL:0002231!7.01e-09!3;CL:0002077!3.13e-08!33;CL:0002336!1.18e-07!1;CL:0002261!1.18e-07!1;CL:0002170!1.18e-07!1;CL:0002568!3.20e-07!1;CL:1001319!4.61e-07!1;CL:1000600!4.61e-07!1;CL:0002566!4.90e-07!1 | |ontology_enrichment_celltype=CL:0000244!2.72e-26!4;CL:0000731!2.72e-26!4;CL:0002076!6.45e-25!43;CL:0000066!1.14e-17!254;CL:0000223!2.15e-17!59;CL:0002159!1.25e-16!13;CL:0002368!1.94e-16!13;CL:0000317!1.04e-13!2;CL:1000448!1.04e-13!2;CL:0002308!1.04e-13!2;CL:0002140!1.04e-13!2;CL:0000362!1.84e-12!8;CL:0002251!4.58e-10!21;CL:0000240!1.25e-09!6;CL:0000311!1.25e-09!6;CL:0000079!1.25e-09!6;CL:0000237!1.25e-09!6;CL:0000036!1.25e-09!6;CL:0000357!1.25e-09!6;CL:0000114!1.25e-09!6;CL:0002166!2.15e-09!3;CL:0002621!3.38e-09!3;CL:0002231!7.01e-09!3;CL:0002077!3.13e-08!33;CL:0002336!1.18e-07!1;CL:0002261!1.18e-07!1;CL:0002170!1.18e-07!1;CL:0002568!3.20e-07!1;CL:1001319!4.61e-07!1;CL:1000600!4.61e-07!1;CL:0002566!4.90e-07!1 | ||
|ontology_enrichment_celltype_v019=CL:0000244;3.47e-67;4!CL:0000731;3.47e-67;4!CL:0000317;1.38e-33;2!CL:1000448;1.38e-33;2!CL:0002308;1.38e-33;2!CL:0002140;1.38e-33;2!CL:0002166;8.98e-23;3!CL:0002159;4.94e-19;14!CL:0002336;1.03e-17;1!CL:0002261;1.03e-17;1!CL:0002252;1.03e-17;1!CL:0002170;1.03e-17;1!CL:0000622;4.39e-14;5!CL:0000154;6.70e-12;6!CL:0000150;3.07e-08;9!CL:0000362;3.07e-08;9!CL:0002076;4.99e-08;42!CL:0002251;5.41e-08;20!CL:0002077;4.97e-07;34!CL:0002621;9.11e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000244,3.47e-67,4;CL:0000731,3.47e-67,4;CL:0000317,1.17e-33,2;CL:1000448,1.17e-33,2;CL:0002308,1.17e-33,2;CL:0002140,1.17e-33,2;CL:0002166,1.00e-22,3;CL:0002159,4.94e-19,14;CL:0002252,6.23e-18,1;CL:0002336,1.22e-17,1;CL:0002261,1.22e-17,1;CL:0002170,1.22e-17,1;CL:0000622,4.11e-14,5;CL:0000154,6.34e-12,6;CL:0000066,1.64e-08,253;CL:0000150,2.96e-08,9;CL:0000362,2.96e-08,9;CL:0002077,4.98e-08,34;CL:0002251,5.42e-08,20 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0050619!3.01e-07!1;DOID:1357!3.01e-07!1;DOID:1749!4.44e-07!14 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000365!1.32e-31!5;UBERON:0005910!2.55e-26!6;UBERON:0002419!1.04e-13!2;UBERON:0007771!1.04e-13!2;UBERON:0003297!1.04e-13!2;UBERON:0001821!1.04e-13!2;UBERON:0003487!1.04e-13!2;UBERON:0001820!1.04e-13!2;UBERON:0005089!1.04e-13!2;UBERON:0005088!1.04e-13!2;UBERON:0004119!2.63e-10!169;UBERON:0000925!2.63e-10!169;UBERON:0006595!2.63e-10!169;UBERON:0001949!3.38e-09!3;UBERON:0001004!3.34e-08!72;UBERON:0001764!3.01e-07!1;UBERON:0001825!3.01e-07!1;UBERON:0001708!3.02e-07!4;UBERON:0001704!3.02e-07!4;UBERON:0001003!3.64e-07!14;UBERON:0007376!3.64e-07!14;UBERON:0007383!3.64e-07!14;UBERON:0000997!3.84e-07!1;UBERON:0005056!3.84e-07!1;UBERON:0005911!4.27e-07!82;UBERON:0004645!4.61e-07!1;UBERON:0001256!4.61e-07!1;UBERON:0001259!4.61e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0000365;7.02e-54;5!UBERON:0005910;5.30e-45;6!UBERON:0000486;8.21e-35;12!UBERON:0002419;1.38e-33;2!UBERON:0007771;1.38e-33;2!UBERON:0003297;1.38e-33;2!UBERON:0001821;1.38e-33;2!UBERON:0003487;1.38e-33;2!UBERON:0001820;1.38e-33;2!UBERON:0001708;2.38e-17;4!UBERON:0008895;2.38e-17;4!UBERON:0011159;4.39e-14;5!UBERON:0006554;2.62e-09;30!UBERON:0001008;2.62e-09;30!UBERON:0005911;7.67e-09;36!UBERON:0011137;6.74e-07;11!UBERON:0010323;6.74e-07;11!UBERON:0001043;9.11e-07;3!UBERON:0001949;9.11e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000365,7.03e-54,5;UBERON:0005910,5.31e-45,6;UBERON:0002419,1.17e-33,2;UBERON:0007771,1.17e-33,2;UBERON:0003297,1.17e-33,2;UBERON:0001821,1.17e-33,2;UBERON:0003487,1.17e-33,2;UBERON:0001820,1.17e-33,2;UBERON:0005089,1.17e-33,2;UBERON:0005088,1.17e-33,2;UBERON:0001708,2.59e-17,4;UBERON:0008895,2.59e-17,4;UBERON:0011159,4.69e-14,5;UBERON:0010188,7.08e-12,6;UBERON:0002539,7.08e-12,6;UBERON:0008816,7.08e-12,6;UBERON:0010323,6.94e-07,11;UBERON:0001043,7.70e-07,3;UBERON:0009143,7.70e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.6024118375565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.74437620857014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386521706326594,1.09098448236334,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219500570817251,0,0.100528972411631,1.11106134190236,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00789276919316,1.41775097242386,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.40101294060657,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14853107599234,1.30012049207304,0,0,0,0,0,0,0,0,0,0.330569830721956,0.768760269460425,2.29702882490251,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288666338176536,0,0,0,4.73555909938353,3.36942951335251,3.54744122829341,6.89170200620878,0,0,0,0,0,0,0,0,0,0,0.490080431962063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0979923974143777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19980960958213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.638341257770182,0,0,0,0,0.157054096250234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.353909170043221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.5647304101948,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0918948995348449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0814032686109745,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.6024118375565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.74437620857014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386521706326594,1.09098448236334,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219500570817251,0,0.100528972411631,1.11106134190236,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00789276919316,1.41775097242386,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.40101294060657,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14853107599234,1.30012049207304,0,0,0,0,0,0,0,0,0,0.330569830721956,0.768760269460425,2.29702882490251,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288666338176536,0,0,0,4.73555909938353,3.36942951335251,3.54744122829341,6.89170200620878,0,0,0,0,0,0,0,0,0,0,0.490080431962063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0979923974143777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19980960958213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.638341257770182,0,0,0,0,0.157054096250234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.353909170043221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.5647304101948,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0918948995348449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0814032686109745,0,0,0,0,0,0,0,0,0 | ||
|short_description=p17@PTHLH | |short_description=p17@PTHLH | ||
}} | }} |
Latest revision as of 00:47, 18 September 2015
Short description: | p17@PTHLH |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_17_at_PTHLH_5end |
Coexpression cluster: | C1109_Urothelial_Small_Gingival_Mallassezderived_Prostate_Sebocyte_Bronchial |
Association with transcript: | -315bp_to_ENST00000545234_5end |
EntrezGene: | PTHLH |
HGNC: | 9607 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
transitional epithelial cell | 3.47e-67 | 4 |
urothelial cell | 3.47e-67 | 4 |
sebum secreting cell | 1.17e-33 | 2 |
epithelial cell of sweat gland | 1.17e-33 | 2 |
epithelial cell of skin gland | 1.17e-33 | 2 |
acinar cell of sebaceous gland | 1.17e-33 | 2 |
epithelial cell of Malassez | 1.00e-22 | 3 |
general ecto-epithelial cell | 4.94e-19 | 14 |
epithelial cell of esophagus | 6.23e-18 | 1 |
buccal mucosa cell | 1.22e-17 | 1 |
endothelial cell of viscerocranial mucosa | 1.22e-17 | 1 |
keratinized cell of the oral mucosa | 1.22e-17 | 1 |
acinar cell | 4.11e-14 | 5 |
protein secreting cell | 6.34e-12 | 6 |
epithelial cell | 1.64e-08 | 253 |
glandular epithelial cell | 2.96e-08 | 9 |
epidermal cell | 2.96e-08 | 9 |
ecto-epithelial cell | 4.98e-08 | 34 |
epithelial cell of alimentary canal | 5.42e-08 | 20 |
Ontology term | p-value | n |
---|---|---|
urothelium | 7.03e-54 | 5 |
transitional epithelium | 5.31e-45 | 6 |
skin gland | 1.17e-33 | 2 |
epidermis gland | 1.17e-33 | 2 |
gland of integumental system | 1.17e-33 | 2 |
sebaceous gland | 1.17e-33 | 2 |
skin sebaceous gland | 1.17e-33 | 2 |
sweat gland | 1.17e-33 | 2 |
sweat gland placode | 1.17e-33 | 2 |
sebaceous gland placode | 1.17e-33 | 2 |
jaw skeleton | 2.59e-17 | 4 |
splanchnocranium | 2.59e-17 | 4 |
primary subdivision of cranial skeletal system | 4.69e-14 | 5 |
protuberance | 7.08e-12 | 6 |
pharyngeal arch | 7.08e-12 | 6 |
embryonic head | 7.08e-12 | 6 |
cranial skeletal system | 6.94e-07 | 11 |
esophagus | 7.70e-07 | 3 |
esophageal region | 7.70e-07 | 3 |