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FFCP PHASE1:Mm9::chr2:27532754..27532815,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=20181
|EntrezGene=20181
|HGNC=
|HGNC=
|MCL_coexpression_id=3341
|TSSclassifier=NA
|UniProt=P28700
|UniProt=P28700
|association_with_transcript=0bp_to_ENSMUST00000166775_5end
|association_with_transcript=0bp_to_ENSMUST00000166775_5end
|cluster_id=chr2:27532754..27532815,+
|description=CAGE_peak_1_at_Rxra_5end
|description=CAGE_peak_1_at_Rxra_5end
|id=chr2:27532754..27532815,+
|id=chr2:27532754..27532815,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0009854!1.12e-08!23;UBERON:0009856!1.12e-08!23;UBERON:0002365!2.33e-08!25;UBERON:0002330!2.33e-08!25;UBERON:0002107!3.25e-08!22;UBERON:0007499!3.25e-08!22;UBERON:0006925!3.25e-08!22;UBERON:0009497!3.25e-08!22;UBERON:0000015!3.25e-08!22;UBERON:0002423!3.25e-08!22;UBERON:0006235!3.25e-08!22;UBERON:0008835!3.25e-08!22;UBERON:0003894!3.25e-08!22;UBERON:0004161!3.25e-08!22;UBERON:0008836!3.25e-08!22
|ontology_enrichment_uberon_v019_2=UBERON:0009854,1.11e-08,23;UBERON:0009856,1.11e-08,23;UBERON:0002365,2.33e-08,25;UBERON:0002330,2.33e-08,25;UBERON:0002107,3.25e-08,22;UBERON:0007499,3.25e-08,22;UBERON:0006925,3.25e-08,22;UBERON:0009497,3.25e-08,22;UBERON:0000015,3.25e-08,22;UBERON:0002423,3.25e-08,22;UBERON:0006235,3.25e-08,22;UBERON:0008835,3.25e-08,22;UBERON:0003894,3.25e-08,22;UBERON:0004161,3.25e-08,22;UBERON:0008836,3.25e-08,22
|phase1_expression=28.9869413259677,69.4461061202329,79.6248668931688,146.392678272506,153.274093363582,20.9849089889862,21.2587502941928,4.64843964389675,2.67498572088167,2.10658073689794,1.36974374580404,0.957265907944037,2.22560948910567,2.53519167015092,14.3237197580735,5.66930748691513,11.1929900500503,3.3123527362615,2.4680598049033,4.2438965179803,23.0467316309399,0.893618560807968,0,35.1983330145495,34.1819828790083,47.6612530215467,39.1993416504758,29.5195588779668,70.3086651988583,69.5603158137409,17.5167103417691,0.635030673459631,0,47.5445043046316,15.5979874665688,20.2806267337361,18.9877501324003,1.67412652294763,2.3440060335714,2.61761871986899,2.35292595212406,0,1.45653105909346,28.3267840445049,28.182786879025,20.190142737785,138.483267949603,9.3750817243592,10.9843091367236,11.8602238435313,25.7575015790667,17.2503077237966,0.335565212115473,8.70434570413613,6.04968838456435,23.4106086792712,60.7450892670164,41.7694394744728,8.9019242778223,8.46385566835253,9.50747105259269,36.9340539955354,56.0255721550018,98.0890691836725,153.274286197881,112.96633827643,47.6364175724264,31.5059010363675,5.59923906465779,5.67024940993101,6.09942387919008,15.4251531578054,12.8103753751936,6.98197555525238,7.09256485534949,6.43453150627015,20.9220173898839,9.57655035638908,9.21639199537461,7.51751840062105,4.20843160571084,6.25096044668112,11.725685958058,12.380777420697,11.4598685832608,12.0797720044204,9.11178757114259,8.76077395378913,8.02697649331751,10.0510174942025,57.6830332516339,167.78265601137,150.953636083121,315.726367108123,303.445586948061,300.178014355215,77.9466531731223,31.3591793543626,32.2134645707557,33.9205991529927,24.5067550411424,75.7126216744475,135.046777044522,163.545341725266,15.5873549528074,16.2150313904063,21.2320266906209,116.467557313441,22.7865337609511,28.797774978576,17.868988656912,23.748307308347,20.9860102503013,15.3737093363675,24.8112172056337,20.8606541607261,49.6861885146091,47.2839897128111,15.9229899350977,30.4121677901129,20.759102735277,27.1530141755724,67.101034038524,7.02673912827713,7.54008144528438,62.3315214708963,1.43778149407104,1.19980546198682,1.90605340609597,14.5296920222678,7.32000964509802,3.14135880282161,5.9100268865374,3.58001640262463,8.93488591606108,8.27430441645564,31.6720421574484,21.8956268273764,13.6470289554184,52.6104639716185,19.6481868873683,14.0240283704418,24.6685117833328,22.4550178575215,25.4456506825966,20.7544226861457,27.8294121942395,31.0444044886819,29.3172470388665,40.2795950757455,40.6447096818722,38.3592531748256,57.2777333404732,61.6406334744235,79.2261225170582,25.4763861527671,2.1066395619397,0.51469581422943,1.70498099637356,19.2626968458017,23.6871320580907,17.8261440846405,28.8828577413957,31.8758055430794,26.2254091908543,27.2064715357977,26.5590667385623,25.8051406631445,21.3927804887525,21.1776028662033,28.4551521505954,28.0703975856638,25.2482632584708,33.9542239463741,6.9395683026162,7.82075054082562,132.497931976503,57.6502235326527,22.82184280727,24.384850545346,29.1240462587931,37.5131355799417,40.0280478920767,31.7676795607974,57.8925455084304,44.962814639655,33.4275827704358,35.0163390792425,29.8295053292254,53.9291645192533,45.8212665734352,58.1492517902752,17.4494468876835,22.5069569841166,27.0498565615393,26.6783239477362,26.1835857676295,25.8099817196372,34.90656849259,35.5740456630841,36.423704859199,47.7547024377368,207.220386333917,12.1796927172749,16.9040735797355,19.7878658898671,24.9517949307859,27.2530190520231,41.24938798859,79.4041339364237,128.411099605828,69.1894761233965,96.3246983733275,114.247270934231,121.382654841564,159.377271984628,144.414917885139,192.494965023983,27.5282253348241,19.7071068241304,22.1632367961155,29.7053900106579,30.7444225257938,31.1561638841777,33.0880660831559,35.5143239101194,23.1723661836101,29.8977331025846,23.9182152986231,25.2349504662237,23.13978757003,31.8227928879325,18.0949540727127,21.2123216689297,51.1434843939798,44.9776896476714,13.0045977890111,12.8932855251423,27.7050057686581,51.5040691496921,18.9304931649754,21.8645696806118,21.9731865687455,23.1799734013975,29.6322236529584,25.7599643017838,21.0501564870945,20.7501659117031,20.9502522311657,6.42642632843614,25.2653351670718,24.0388564950795,26.2248004559257,32.1691739796444,53.0980553359851,31.0759214278376,18.7440605318146,16.2200368590072,25.3959627877465,25.8245524272899,32.5619649391959,26.9014959813354,23.1723295950069,29.7074552459667,37.9506990869996,48.4737053266478,19.4050575279659,24.4883087882582,22.2496936106338,21.2193664681276,29.0837983173329,40.3113527780679,30.1124707701881,51.1501114512527,29.5686352160275,77.9542020778858,15.4369878638473,101.40504555901,91.7117943632744,64.0523262737015,53.7175548014114,46.7801564273425,45.1795296776269,19.4696567111035,15.2075083910089,39.8326655169019,31.6682641802207,13.9392658183471,9.29520748502971,11.8964650067392,1.86976272993241,4.3384950220334,4.56059913554598,32.4588010125139,26.8885594543965,27.4481280621246,30.3495007709262,38.890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|phase1_expression=28.9869413259677,69.4461061202329,79.6248668931688,146.392678272506,153.274093363582,20.9849089889862,21.2587502941928,4.64843964389675,2.67498572088167,2.10658073689794,1.36974374580404,0.957265907944037,2.22560948910567,2.53519167015092,14.3237197580735,5.66930748691513,11.1929900500503,3.3123527362615,2.4680598049033,4.2438965179803,23.0467316309399,0.893618560807968,0,35.1983330145495,34.1819828790083,47.6612530215467,39.1993416504758,29.5195588779668,70.3086651988583,69.5603158137409,17.5167103417691,0.635030673459631,0,47.5445043046316,15.5979874665688,20.2806267337361,18.9877501324003,1.67412652294763,2.3440060335714,2.61761871986899,2.35292595212406,0,1.45653105909346,28.3267840445049,28.182786879025,20.190142737785,138.483267949603,9.3750817243592,10.9843091367236,11.8602238435313,25.7575015790667,17.2503077237966,0.335565212115473,8.70434570413613,6.04968838456435,23.4106086792712,60.7450892670164,41.7694394744728,8.9019242778223,8.46385566835253,9.50747105259269,36.9340539955354,56.0255721550018,98.0890691836725,153.274286197881,112.96633827643,47.6364175724264,31.5059010363675,5.59923906465779,5.67024940993101,6.09942387919008,15.4251531578054,12.8103753751936,6.98197555525238,7.09256485534949,6.43453150627015,20.9220173898839,9.57655035638908,9.21639199537461,7.51751840062105,4.20843160571084,6.25096044668112,11.725685958058,12.380777420697,11.4598685832608,12.0797720044204,9.11178757114259,8.76077395378913,8.02697649331751,10.0510174942025,57.6830332516339,167.78265601137,150.953636083121,315.726367108123,303.445586948061,300.178014355215,77.9466531731223,31.3591793543626,32.2134645707557,33.9205991529927,24.5067550411424,75.7126216744475,135.046777044522,163.545341725266,15.5873549528074,16.2150313904063,21.2320266906209,116.467557313441,22.7865337609511,28.797774978576,17.868988656912,23.748307308347,20.9860102503013,15.3737093363675,24.8112172056337,20.8606541607261,49.6861885146091,47.2839897128111,15.9229899350977,30.4121677901129,20.759102735277,27.1530141755724,67.101034038524,7.02673912827713,7.54008144528438,62.3315214708963,1.43778149407104,1.19980546198682,1.90605340609597,14.5296920222678,7.32000964509802,3.14135880282161,5.9100268865374,3.58001640262463,8.93488591606108,8.27430441645564,31.6720421574484,21.8956268273764,13.6470289554184,52.6104639716185,19.6481868873683,14.0240283704418,24.6685117833328,22.4550178575215,25.4456506825966,20.7544226861457,27.8294121942395,31.0444044886819,29.3172470388665,40.2795950757455,40.6447096818722,38.3592531748256,57.2777333404732,61.6406334744235,79.2261225170582,25.4763861527671,2.1066395619397,0.51469581422943,1.70498099637356,19.2626968458017,23.6871320580907,17.8261440846405,28.8828577413957,31.8758055430794,26.2254091908543,27.2064715357977,26.5590667385623,25.8051406631445,21.3927804887525,21.1776028662033,28.4551521505954,28.0703975856638,25.2482632584708,33.9542239463741,6.9395683026162,7.82075054082562,132.497931976503,57.6502235326527,22.82184280727,24.384850545346,29.1240462587931,37.5131355799417,40.0280478920767,31.7676795607974,57.8925455084304,44.962814639655,33.4275827704358,35.0163390792425,29.8295053292254,53.9291645192533,45.8212665734352,58.1492517902752,17.4494468876835,22.5069569841166,27.0498565615393,26.6783239477362,26.1835857676295,25.8099817196372,34.90656849259,35.5740456630841,36.423704859199,47.7547024377368,207.220386333917,12.1796927172749,16.9040735797355,19.7878658898671,24.9517949307859,27.2530190520231,41.24938798859,79.4041339364237,128.411099605828,69.1894761233965,96.3246983733275,114.247270934231,121.382654841564,159.377271984628,144.414917885139,192.494965023983,27.5282253348241,19.7071068241304,22.1632367961155,29.7053900106579,30.7444225257938,31.1561638841777,33.0880660831559,35.5143239101194,23.1723661836101,29.8977331025846,23.9182152986231,25.2349504662237,23.13978757003,31.8227928879325,18.0949540727127,21.2123216689297,51.1434843939798,44.9776896476714,13.0045977890111,12.8932855251423,27.7050057686581,51.5040691496921,18.9304931649754,21.8645696806118,21.9731865687455,23.1799734013975,29.6322236529584,25.7599643017838,21.0501564870945,20.7501659117031,20.9502522311657,6.42642632843614,25.2653351670718,24.0388564950795,26.2248004559257,32.1691739796444,53.0980553359851,31.0759214278376,18.7440605318146,16.2200368590072,25.3959627877465,25.8245524272899,32.5619649391959,26.9014959813354,23.1723295950069,29.7074552459667,37.9506990869996,48.4737053266478,19.4050575279659,24.4883087882582,22.2496936106338,21.2193664681276,29.0837983173329,40.3113527780679,30.1124707701881,51.1501114512527,29.5686352160275,77.9542020778858,15.4369878638473,101.40504555901,91.7117943632744,64.0523262737015,53.7175548014114,46.7801564273425,45.1795296776269,19.4696567111035,15.2075083910089,39.8326655169019,31.6682641802207,13.9392658183471,9.29520748502971,11.8964650067392,1.86976272993241,4.3384950220334,4.56059913554598,32.4588010125139,26.8885594543965,27.4481280621246,30.3495007709262,38.8904230586912,36.903273273104,33.1766292106659,44.9634799145827,27.4843739083231,68.4367058980666,19.8828580187816,6.20062232552609,23.6236142749487,18.8622679121091,37.3346281620572,29.7067593998782,28.8914974589231,40.7229618100766,28.9053734353569,20.9718688851422,7.73069186643219,10.9451402377989,6.63623353319174,21.2861476054672,16.1256202748779,13.1220031207573,14.3221356533985,7.3512101269068,8.53387691591779,5.61220203263393,7.57248374611107,8.68757595866998,7.76361625553672,6.1398464866044,6.15755786498109,6.07759891344159,53.9618313004203,29.5241317987506,9.9582380836518,31.8980771091749,74.3779937023933,14.0761856588386,25.8243790216844,51.8771477371339,20.5644562654499,2.82375921308533,4.60325236507177,1.71868654031819,5.67115501734169,6.16574267793578,2.2661816921691,4.72515750162264,4.5032120322422,4.07828168085784,6.73088405277366,23.9748772919448,16.3600198094423,24.2441720170871,38.897074730927,33.1188796952212,44.4901290449034,30.8922951644245,34.8199246733731,29.2036480728552,38.4099761880972,33.2057882856214,35.4617521805823,40.7340557493988,36.0461608039414,32.2787335530547,37.6272016113628,38.3577118877472,37.8102072108862,35.0273015682811,36.0637354329273,37.3727485100103,30.8807902717247,26.9432894640473,37.3540290745084,33.879376949519,33.0843116856455,30.1831155240075,35.5144110441088,33.9510284614654,40.9633858310149,34.760060310383,37.8257212322164,27.8277109355389,37.3397787258178,42.24654780487,37.7213972686298,42.8094843455097,55.0069898363644,51.8391379906566,34.6328528017639,29.2153472881731
|short_description=p1@Rxra
|short_description=p1@Rxra
}}
}}

Latest revision as of 11:43, 26 September 2015

Short description:p1@Rxra
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Rxra_5end
Coexpression cluster:MCL_coexpression_mm9:3341
Association with transcript: 0bp_to_ENSMUST00000166775_5end
EntrezGene:Rxra
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Rxra

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G728.99
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I569.45
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I679.62
CD326+ enterocyte, pool1.CNhs13542.11848-124I3146.39
CD326+ enterocyte, pool2.CNhs13197.11849-124I4153.27
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I720.98
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I821.26
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E94.65
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E72.67
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F22.11
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E61.37
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.96
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E42.23
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E82.54
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A114.32
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A35.67
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A511.19
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A23.31
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A42.47
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A64.24
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A323.05
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.89
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D135.20
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D234.18
GP2+ M cell, pool1.CNhs13228.11845-124H947.66
GP2+ M cell, pool2.CNhs13231.11846-124I139.20
GP2+ M cell, pool3.CNhs13240.11847-124I229.52
Ileum epithelium, pool1.CNhs13199.10252-104B970.31
Ileum epithelium, pool2.CNhs13232.10253-104C169.56
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C817.52
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.64
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E947.54
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F515.60
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F620.28
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F718.99
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G81.67
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H12.34
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H32.62
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G92.35
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H41.46
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D828.33
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D928.18
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B320.19
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B7138.48
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C29.38
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B810.98
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C311.86
Mouse Astrocytes, donor2.CNhs12078.11552-120C425.76
Mouse Astrocytes, donor3.CNhs12107.11633-122C417.25
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.34
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I98.70
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A16.05
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C123.41
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E160.75
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C541.77
Mouse Granule cells, donor1.CNhs12131.11713-123C38.90
Mouse Granule cells, donor2.CNhs12357.11731-123E38.46
Mouse Granule cells, donor3.CNhs12108.11636-122C79.51
Mouse Meningeal cells, donor1.CNhs12132.11716-123C636.93
Mouse Meningeal cells, donor3.CNhs12109.11639-122D156.03
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C798.09
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E7153.27
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D2112.97
Mouse Microglia, donor1.CNhs12629.11718-123C847.64
Mouse Microglia, donor2.CNhs12634.11736-123E831.51
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D55.60
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F55.67
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D96.10
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F115.43
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D512.81
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D26.98
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F27.09
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D66.43
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D320.92
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F39.58
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D79.22
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D47.52
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F44.21
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D86.25
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E411.73
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E512.38
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I611.46
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D612.08
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F69.11
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E18.76
Mouse Schwann, donor1.CNhs12507.11728-123D98.03
Mouse Schwann, donor2.CNhs12573.11746-123F910.05
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G357.68
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F7167.78
Mouse hepatocyte, donor1.CNhs13078.11714-123C4150.95
Mouse hepatocyte, donor3.CNhs12615.11637-122C8315.73
Mouse hepatocyte, donor6.CNhs13090.11822-124F4303.45
Mouse hepatocyte, donor8.CNhs13091.11824-124F6300.18
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A777.95
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I731.36
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E332.21
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I833.92
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G624.51
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H175.71
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I8135.05
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B6163.55
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G115.59
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G216.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G321.23
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B6116.47
accessory axillary lymph node, adult.CNhs10475.1063-29H922.79
adrenal gland, adult.CNhs10508.49-24D728.80
adrenal gland, embryo E14.CNhs11038.406-44C517.87
adrenal gland, embryo E16.CNhs11004.1254-43D623.75
adrenal gland, embryo E17.CNhs11043.1263-45I120.99
adrenal gland, embryo E18.CNhs11026.1262-18F515.37
adrenal gland, neonate N00.CNhs11191.1311-23C124.81
adrenal gland, neonate N25.CNhs11223.1377-27I320.86
amnion, adult pregnant day17.5.CNhs10488.583-22A849.69
aorta, adult.CNhs10498.46-23H147.28
bone (os femoris), adult.CNhs10483.56-12G215.92
bone (os femoris), neonate N02.CNhs11227.1985-43F530.41
bone (os femoris), neonate N16.CNhs11225.1525-43A620.76
bone (os femoris), neonate N20.CNhs11195.1350-25C327.15
cecum, adult.CNhs10467.37-13H467.10
cerebellum, adult.CNhs10494.15-8B27.03
cerebellum, neonate N30.CNhs11135.1395-42I27.54
colon, adult.CNhs10468.36-18H762.33
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C71.44
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D11.20
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D41.91
corpora quadrigemina, adult.CNhs10501.16-22A414.53
corpus striatum, adult.CNhs10487.19-21D87.32
corpus striatum, neonate N00.CNhs11226.630-43F13.14
cortex, adult.CNhs10473.12-14D55.91
cortex, neonate N30.CNhs11107.1392-42F23.58
diencephalon, adult.CNhs10482.20-12F28.93
diencephalon, neonate N30.CNhs11201.1388-42B28.27
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B131.67
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A221.90
epididymis, adult.CNhs10490.58-23B213.65
eyeball, adult.CNhs10484.31-12G452.61
eyeball, embryo E12.CNhs11016.345-16C619.65
eyeball, embryo E14.CNhs10521.399-16E214.02
eyeball, embryo E15.CNhs10593.426-16C924.67
eyeball, embryo E17.CNhs11023.1261-18D422.46
eyeball, neonate N00.CNhs11207.633-15C625.45
eyeball, neonate N01.CNhs11140.1532-43E720.75
eyeball, neonate N02.CNhs11205.1551-44G827.83
eyeball, neonate N16.CNhs11188.777-19A231.04
forelimb, embryo E11.CNhs10596.335-25E229.32
forelimb, embryo E12.CNhs10600.359-14H240.28
forelimb, embryo E13.CNhs10589.384-1E240.64
forelimb, embryo E14.CNhs10577.413-26A838.36
forelimb, embryo E15.CNhs11007.437-20E757.28
forelimb, embryo E17.CNhs10598.1517-43C461.64
forelimb, embryo E18.CNhs11008.1520-43B579.23
gonad, embryo E13.CNhs11044.1564-45I625.48
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C82.11
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.51
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D51.70
heart, embryo E11.CNhs10586.331-24E919.26
heart, embryo E12.CNhs11015.353-12F523.69
heart, embryo E13.CNhs11013.376-3I917.83
heart, embryo E14.CNhs10597.403-26D428.88
heart, embryo E15.CNhs11017.431-16C831.88
heart, embryo E16.CNhs11021.457-17C626.23
heart, embryo E17.CNhs11025.479-18E527.21
heart, embryo E18.CNhs11030.1283-20G326.56
heart, neonate N00.CNhs11213.639-21E325.81
heart, neonate N03.CNhs11221.1349-25I221.39
heart, neonate N10.CNhs11118.749-24G121.18
heart, neonate N16.CNhs11209.782-15G128.46
heart, neonate N20.CNhs11127.821-26I628.07
heart, neonate N25.CNhs11196.1351-25D325.25
heart, neonate N30.CNhs11202.1390-42D233.95
hippocampus, adult.CNhs10478.13-16E86.94
hippocampus, neonate N00.CNhs11228.627-43G17.82
intestinal mucosa, adult.CNhs10506.860-29I3132.50
intestine, adult.CNhs10496.178-9A357.65
intestine, embryo E12.CNhs11019.1251-16I522.82
intestine, embryo E13.CNhs11010.381-16D524.38
intestine, embryo E15.CNhs10602.976-16D829.12
intestine, embryo E16.CNhs10585.463-22H437.51
intestine, embryo E17.CNhs10582.482-18D340.03
intestine, embryo E18.CNhs10526.1289-20F731.77
intestine, neonate N00.CNhs11126.644-26D157.89
intestine, neonate N01.CNhs11192.1322-23E944.96
intestine, neonate N06.CNhs11102.688-20B833.43
intestine, neonate N07.CNhs11095.720-20F235.02
intestine, neonate N10.CNhs11098.755-23A529.83
intestine, neonate N20.CNhs11187.827-18D153.93
intestine, neonate N25.CNhs11121.1352-25E345.82
intestine, neonate N30.CNhs11131.1384-42G158.15
kidney, embryo E14.CNhs10606.411-4I917.45
kidney, embryo E15.CNhs10997.434-16F822.51
kidney, embryo E16.CNhs10584.464-22A527.05
kidney, embryo E17.CNhs11028.483-18I226.68
kidney, embryo E18.CNhs11001.1288-20C726.18
kidney, neonate N00.CNhs11214.646-21G725.81
kidney, neonate N10.CNhs11206.758-6D534.91
kidney, neonate N20.CNhs11113.832-19I135.57
kidney, neonate N25.CNhs11122.1353-25F336.42
kidney, neonate N30.CNhs11203.1385-42H147.75
liver, adult pregnant day01.CNhs10466.508-5B2207.22
liver, embryo E12.CNhs10601.355-15F812.18
liver, embryo E13.CNhs10524.378-3H616.90
liver, embryo E14.CNhs10594.409-16E119.79
liver, embryo E15.CNhs10520.433-16D724.95
liver, embryo E16.CNhs10523.462-17F527.25
liver, embryo E17.CNhs10510.481-18A341.25
liver, embryo E18.CNhs10579.499-43G479.40
liver, neonate N00.CNhs11117.641-24F4128.41
liver, neonate N03.CNhs11123.1345-25G269.19
liver, neonate N06.CNhs11101.684-20A896.32
liver, neonate N07.CNhs11103.716-20H2114.25
liver, neonate N10.CNhs11115.751-24B9121.38
liver, neonate N20.CNhs11220.823-25A3159.38
liver, neonate N25.CNhs11198.1368-26H1144.41
liver, neonate N30.CNhs11106.1382-42D1192.49
lung, adult.CNhs10474.28-22B127.53
lung, embryo E12.CNhs10522.354-16G219.71
lung, embryo E14.CNhs10604.404-26F822.16
lung, embryo E15.CNhs11020.432-17C529.71
lung, embryo E16.CNhs10998.458-17B630.74
lung, embryo E17.CNhs10605.480-44A631.16
lung, embryo E18.CNhs10583.1287-20I633.09
lung, neonate N00.CNhs11224.640-42C635.51
lung, neonate N06.CNhs11212.683-20E523.17
lung, neonate N07.CNhs11111.715-19A329.90
lung, neonate N10.CNhs11219.750-23E623.92
lung, neonate N20.CNhs11109.822-18A425.23
lung, neonate N25.CNhs11119.1359-25C723.14
lung, neonate N30.CNhs11133.1394-42H231.82
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A118.09
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A121.21
mammary gland, adult lactating day02.CNhs10480.595-22B651.14
mammary gland, adult pregnant day19.CNhs10476.588-5H244.98
medulla oblongata, adult.CNhs10477.17-12C213.00
medulla oblongata, neonate N30.CNhs11200.1396-42A312.89
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C727.71
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C251.50
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E118.93
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E221.86
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E321.97
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D723.18
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D829.63
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D925.76
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D421.05
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D520.75
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D620.95
olfactory brain, adult.CNhs10489.18-22I96.43
ovary, adult.CNhs10507.91-2I725.27
ovary, embryo E18.CNhs11040.505-44H724.04
ovary, neonate N00.CNhs11217.1299-22I426.22
oviduct, adult pregnant day01.CNhs10500.988-6G632.17
pancreas, adult.CNhs10486.34-16E453.10
pancreas, embryo E14.CNhs11012.405-44F431.08
pancreas, embryo E15.CNhs11042.1556-45F218.74
pancreas, embryo E16.CNhs11003.460-26E516.22
pancreas, embryo E17.CNhs10599.1558-45G325.40
pancreas, embryo E18.CNhs10580.1535-43I725.82
pancreas, neonate N00.CNhs11105.645-26G932.56
pancreas, neonate N01.CNhs11138.1531-43D726.90
pancreas, neonate N02.CNhs11139.1539-43D823.17
pancreas, neonate N16.CNhs11136.787-43B629.71
pancreas, neonate N25.CNhs11094.1555-45E237.95
pancreas, neonate N30.CNhs11182.1548-44H548.47
pituitary gland, adult.CNhs10493.21-1G819.41
pituitary gland, embryo E12.CNhs11018.346-16E624.49
pituitary gland, embryo E13.CNhs11009.370-44C722.25
pituitary gland, embryo E14.CNhs11037.398-44A521.22
pituitary gland, embryo E15.CNhs10592.427-16B929.08
pituitary gland, embryo E16.CNhs11036.449-43F640.31
pituitary gland, embryo E17.CNhs11039.1265-44F530.11
pituitary gland, neonate N00.CNhs11190.1308-22E951.15
placenta, adult pregnant day10.CNhs10472.539-13I729.57
placenta, adult pregnant day17.CNhs10464.577-18G377.95
prostate, adult.CNhs10470.859-1F815.44
skin, adult.CNhs10492.30-1C3101.41
skin, neonate N00.CNhs11124.650-25G491.71
skin, neonate N03.CNhs11215.662-22H364.05
skin, neonate N06.CNhs11097.693-20I553.72
skin, neonate N10.CNhs11108.762-6C446.78
small intestine, neonate N16.CNhs11114.790-21I145.18
spinal cord, adult.CNhs10505.24-13C919.47
spleen, adult.CNhs10465.25-2G215.21
spleen, embryo E16.CNhs11035.461-43C139.83
spleen, embryo E18.CNhs11011.1271-21F231.67
spleen, neonate N10.CNhs11116.752-24D113.94
spleen, neonate N20.CNhs11112.824-19H19.30
spleen, neonate N25.CNhs11099.1354-25G311.90
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C61.87
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C94.34
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D34.56
stomach, adult.CNhs10503.33-1H632.46
stomach, embryo E12.CNhs10588.356-43E326.89
stomach, embryo E15.CNhs10603.1252-16G827.45
stomach, embryo E16.CNhs11022.459-17D430.35
stomach, embryo E17.CNhs11006.1035-18D538.89
stomach, embryo E18.CNhs10999.1286-20C636.90
stomach, neonate N03.CNhs11193.1340-24B833.18
stomach, neonate N07.CNhs11210.718-18A944.96
stomach, neonate N25.CNhs11104.1355-25E427.48
stomach, neonate N30.CNhs11134.1386-42I168.44
submandibular gland, adult.CNhs10469.59-29C119.88
testis, adult.CNhs10504.57-7G56.20
testis, embryo E13.CNhs11031.389-23F523.62
testis, embryo E15.CNhs11034.443-27C518.86
testis, embryo E16.CNhs11033.470-26G537.33
testis, embryo E17.CNhs11029.486-18I529.71
testis, embryo E18.CNhs11027.503-18G528.89
testis, neonate N00.CNhs11189.1300-22B740.72
testis, neonate N07.CNhs11222.726-26I428.91
testis, neonate N10.CNhs11204.763-44D920.97
testis, neonate N20.CNhs11110.839-18H37.73
testis, neonate N30.CNhs11130.1391-42E210.95
thymus, adult.CNhs10471.38-12B56.64
thymus, embryo E14.CNhs11041.402-44I421.29
thymus, embryo E15.CNhs11005.430-45I216.13
thymus, embryo E16.CNhs11002.456-26C513.12
thymus, embryo E17.CNhs10581.478-18C114.32
thymus, embryo E18.CNhs10595.1273-19G47.35
thymus, neonate N02.CNhs11181.1541-43F88.53
thymus, neonate N03.CNhs11137.2104-43C75.61
thymus, neonate N06.CNhs11197.681-26C47.57
thymus, neonate N07.CNhs11211.713-19D38.69
thymus, neonate N10.CNhs11194.748-24E47.76
thymus, neonate N20.CNhs11186.820-7A26.14
thymus, neonate N25.CNhs11125.1362-25G76.16
thymus, neonate N30.CNhs11132.1393-42G26.08
tongue, adult.CNhs10499.32-1B453.96
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H329.52
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F79.96
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G531.90
urinary bladder, adult.CNhs10481.879-12E474.38
uterus, adult pregnant day19.CNhs10497.590-15F514.08
uterus, adult.CNhs10509.92-27E525.82
vagina, adult.CNhs10502.89-27D551.88
vesicular gland, adult.CNhs10491.51-27F820.56
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A12.82
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A24.60
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31.72
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D75.67
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A46.17
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A52.27
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A64.73
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A74.50
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A84.08
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A96.73
whole body, embryo E11.CNhs11014.324-5I823.97
whole body, embryo E12.CNhs10587.857-27C916.36
whole body, embryo E13.CNhs10512.372-23H224.24
whole body, embryo E14.5.CNhs10578.420-27D238.90
whole body, embryo E14.CNhs10519.395-14B133.12
whole body, embryo E16.CNhs10514.453-14F244.49
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G530.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G534.82
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G529.20
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G538.41
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G533.21
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G535.46
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G540.73
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G536.05
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G532.28
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G537.63
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G538.36
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G537.81
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G535.03
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G536.06
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G537.37
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G530.88
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G526.94
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G537.35
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G533.88
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G533.08
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G530.18
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G535.51
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G533.95
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G540.96
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G534.76
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G537.83
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G527.83
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G537.34
whole body, embryo E17.5.CNhs10513.490-9F942.25
whole body, embryo E17.CNhs10517.475-3I537.72
whole body, embryo E18.CNhs10516.493-3B342.81
whole body, neonate N00.CNhs10525.657-19C255.01
whole body, neonate N01.CNhs10576.659-23C651.84
whole body, neonate N06.CNhs10515.692-21D134.63
whole body, neonate N10.CNhs10518.761-6B429.22





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
digestive tract diverticulum1.11e-0823
sac1.11e-0823
exocrine gland2.33e-0825
exocrine system2.33e-0825
liver3.25e-0822
epithelial sac3.25e-0822
digestive gland3.25e-0822
epithelium of foregut-midgut junction3.25e-0822
anatomical boundary3.25e-0822
hepatobiliary system3.25e-0822
foregut-midgut junction3.25e-0822
hepatic diverticulum3.25e-0822
liver primordium3.25e-0822
septum transversum3.25e-0822
liver bud3.25e-0822
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