FFCP PHASE1:Mm9::chr19:40188154..40188166,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=128 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:40188154..40188166,+ | |||
|description=CAGE_peak_at_chr19:40188154..40188166,+ | |description=CAGE_peak_at_chr19:40188154..40188166,+ | ||
|id=chr19:40188154..40188166,+ | |id=chr19:40188154..40188166,+ | ||
|ontology_enrichment_celltype=CL:0000181!7.42e-17!5;CL:0000417!7.42e-17!5;CL:0000668!7.42e-17!5;CL:0000412!7.42e-17!5;CL:0000182!7.42e-17!5;CL:0000057!2.01e-10!1;CL:0000632!2.01e-10!1;CL:0000414!5.37e-08!11 | |ontology_enrichment_celltype=CL:0000181!7.42e-17!5;CL:0000417!7.42e-17!5;CL:0000668!7.42e-17!5;CL:0000412!7.42e-17!5;CL:0000182!7.42e-17!5;CL:0000057!2.01e-10!1;CL:0000632!2.01e-10!1;CL:0000414!5.37e-08!11 | ||
|ontology_enrichment_celltype_v019_2=CL:0000057,5.07e-23,1;CL:0000632,5.07e-23,1;CL:0000182,1.74e-18,5;CL:0000151,1.34e-08,3;CL:0000499,1.34e-08,3;CL:0000327,1.34e-08,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!2.09e-25!22;UBERON:0007499!2.09e-25!22;UBERON:0006925!2.09e-25!22;UBERON:0009497!2.09e-25!22;UBERON:0000015!2.09e-25!22;UBERON:0002423!2.09e-25!22;UBERON:0006235!2.09e-25!22;UBERON:0008835!2.09e-25!22;UBERON:0003894!2.09e-25!22;UBERON:0004161!2.09e-25!22;UBERON:0008836!2.09e-25!22;UBERON:0009854!2.72e-24!23;UBERON:0009856!2.72e-24!23;UBERON:0002365!2.49e-22!25;UBERON:0002330!2.49e-22!25;UBERON:0005172!3.77e-14!49;UBERON:0005173!3.77e-14!49;UBERON:0002417!3.77e-14!49;UBERON:0000916!3.77e-14!49;UBERON:0003914!1.01e-11!47;UBERON:0005256!1.01e-11!47;UBERON:0005057!9.04e-11!51;UBERON:0009569!2.21e-10!66;UBERON:0003929!5.90e-10!55;UBERON:0002368!4.35e-09!60;UBERON:0002530!2.37e-08!65;UBERON:0000490!3.23e-08!66;UBERON:0005177!6.18e-08!85;UBERON:0005911!7.73e-08!69;UBERON:0002405!1.02e-07!70;UBERON:0000949!1.72e-07!72;UBERON:0002100!8.45e-07!98;UBERON:0000466!8.87e-07!79 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.26e-16,22;UBERON:0007499,1.26e-16,22;UBERON:0006925,1.26e-16,22;UBERON:0009497,1.26e-16,22;UBERON:0000015,1.26e-16,22;UBERON:0002423,1.26e-16,22;UBERON:0006235,1.26e-16,22;UBERON:0008835,1.26e-16,22;UBERON:0003894,1.26e-16,22;UBERON:0004161,1.26e-16,22;UBERON:0008836,1.26e-16,22;UBERON:0009854,6.04e-16,23;UBERON:0009856,6.04e-16,23;UBERON:0002365,9.61e-15,25;UBERON:0002330,9.61e-15,25;UBERON:0005256,1.45e-08,45;UBERON:0003914,3.12e-08,47;UBERON:0005172,6.29e-08,49;UBERON:0005173,6.29e-08,49;UBERON:0002417,6.29e-08,49;UBERON:0000916,6.29e-08,49;UBERON:0003929,3.83e-07,55 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.0229671388697,0.679971333707751,0,18.1937396885347,4.03224198387602,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0632365371242573,0,0,0,0.296452627087149,0,0,0,0,0,0,0,0,0,1.43768206527355,0,0.624075346229121,0,0.179397413521912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.0229671388697,0.679971333707751,0,18.1937396885347,4.03224198387602,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0632365371242573,0,0,0,0.296452627087149,0,0,0,0,0,0,0,0,0,1.43768206527355,0,0.624075346229121,0,0.179397413521912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr19:40188154..40188166,+ | |short_description=p@chr19:40188154..40188166,+ | ||
}} | }} |
Latest revision as of 01:22, 4 August 2015
Short description: | p@chr19:40188154..40188166, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr19:40188154..40188166, + |
Coexpression cluster: | MCL_coexpression_mm9:128 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 5.07e-23 | 1 |
hepatic stellate cell | 5.07e-23 | 1 |
hepatocyte | 1.74e-18 | 5 |
secretory cell | 1.34e-08 | 3 |
stromal cell | 1.34e-08 | 3 |
extracellular matrix secreting cell | 1.34e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
liver | 1.26e-16 | 22 |
epithelial sac | 1.26e-16 | 22 |
digestive gland | 1.26e-16 | 22 |
epithelium of foregut-midgut junction | 1.26e-16 | 22 |
anatomical boundary | 1.26e-16 | 22 |
hepatobiliary system | 1.26e-16 | 22 |
foregut-midgut junction | 1.26e-16 | 22 |
hepatic diverticulum | 1.26e-16 | 22 |
liver primordium | 1.26e-16 | 22 |
septum transversum | 1.26e-16 | 22 |
liver bud | 1.26e-16 | 22 |
digestive tract diverticulum | 6.04e-16 | 23 |
sac | 6.04e-16 | 23 |
exocrine gland | 9.61e-15 | 25 |
exocrine system | 9.61e-15 | 25 |
trunk mesenchyme | 1.45e-08 | 45 |
epithelial tube | 3.12e-08 | 47 |
abdomen element | 6.29e-08 | 49 |
abdominal segment element | 6.29e-08 | 49 |
abdominal segment of trunk | 6.29e-08 | 49 |
abdomen | 6.29e-08 | 49 |
gut epithelium | 3.83e-07 | 55 |