FFCP PHASE1:Mm9::chr11:30886264..30886296,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=68044 | |EntrezGene=68044 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=8 | |||
|TSSclassifier=NA | |||
|UniProt=Q9CQG1 | |UniProt=Q9CQG1 | ||
|association_with_transcript=37bp_to_ENSMUST00000020553_5end | |association_with_transcript=37bp_to_ENSMUST00000020553_5end | ||
|cluster_id=chr11:30886264..30886296,- | |||
|description=CAGE_peak_3_at_Chac2_5end | |description=CAGE_peak_3_at_Chac2_5end | ||
|id=chr11:30886264..30886296,- | |id=chr11:30886264..30886296,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0009854!6.08e-13!23;UBERON:0009856!6.08e-13!23;UBERON:0002107!6.12e-13!22;UBERON:0007499!6.12e-13!22;UBERON:0006925!6.12e-13!22;UBERON:0009497!6.12e-13!22;UBERON:0000015!6.12e-13!22;UBERON:0002423!6.12e-13!22;UBERON:0006235!6.12e-13!22;UBERON:0008835!6.12e-13!22;UBERON:0003894!6.12e-13!22;UBERON:0004161!6.12e-13!22;UBERON:0008836!6.12e-13!22;UBERON:0005172!1.77e-12!49;UBERON:0005173!1.77e-12!49;UBERON:0002417!1.77e-12!49;UBERON:0000916!1.77e-12!49;UBERON:0005409!1.16e-11!59;UBERON:0002365!3.67e-10!25;UBERON:0002330!3.67e-10!25;UBERON:0005177!1.26e-09!85;UBERON:0003914!1.57e-09!47;UBERON:0002100!2.52e-09!98;UBERON:0000466!6.12e-09!79;UBERON:0000160!1.96e-08!43;UBERON:0001007!3.24e-08!128;UBERON:0001555!3.24e-08!128;UBERON:0007026!3.24e-08!128;UBERON:0009569!1.40e-07!66;UBERON:0004119!1.47e-07!130;UBERON:0000925!1.47e-07!130;UBERON:0006595!1.47e-07!130;UBERON:0004921!1.67e-07!126;UBERON:0004185!1.67e-07!126;UBERON:0000344!4.83e-07!15;UBERON:0005256!9.95e-07!47 | |ontology_enrichment_uberon=UBERON:0009854!6.08e-13!23;UBERON:0009856!6.08e-13!23;UBERON:0002107!6.12e-13!22;UBERON:0007499!6.12e-13!22;UBERON:0006925!6.12e-13!22;UBERON:0009497!6.12e-13!22;UBERON:0000015!6.12e-13!22;UBERON:0002423!6.12e-13!22;UBERON:0006235!6.12e-13!22;UBERON:0008835!6.12e-13!22;UBERON:0003894!6.12e-13!22;UBERON:0004161!6.12e-13!22;UBERON:0008836!6.12e-13!22;UBERON:0005172!1.77e-12!49;UBERON:0005173!1.77e-12!49;UBERON:0002417!1.77e-12!49;UBERON:0000916!1.77e-12!49;UBERON:0005409!1.16e-11!59;UBERON:0002365!3.67e-10!25;UBERON:0002330!3.67e-10!25;UBERON:0005177!1.26e-09!85;UBERON:0003914!1.57e-09!47;UBERON:0002100!2.52e-09!98;UBERON:0000466!6.12e-09!79;UBERON:0000160!1.96e-08!43;UBERON:0001007!3.24e-08!128;UBERON:0001555!3.24e-08!128;UBERON:0007026!3.24e-08!128;UBERON:0009569!1.40e-07!66;UBERON:0004119!1.47e-07!130;UBERON:0000925!1.47e-07!130;UBERON:0006595!1.47e-07!130;UBERON:0004921!1.67e-07!126;UBERON:0004185!1.67e-07!126;UBERON:0000344!4.83e-07!15;UBERON:0005256!9.95e-07!47 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0009854,1.15e-14,23;UBERON:0009856,1.15e-14,23;UBERON:0002107,1.16e-14,22;UBERON:0007499,1.16e-14,22;UBERON:0006925,1.16e-14,22;UBERON:0009497,1.16e-14,22;UBERON:0000015,1.16e-14,22;UBERON:0002423,1.16e-14,22;UBERON:0006235,1.16e-14,22;UBERON:0008835,1.16e-14,22;UBERON:0003894,1.16e-14,22;UBERON:0004161,1.16e-14,22;UBERON:0008836,1.16e-14,22;UBERON:0005172,1.78e-13,49;UBERON:0005173,1.78e-13,49;UBERON:0002417,1.78e-13,49;UBERON:0000916,1.78e-13,49;UBERON:0002365,1.68e-11,25;UBERON:0002330,1.68e-11,25;UBERON:0003104,3.03e-10,61;UBERON:0009142,3.03e-10,61;UBERON:0005177,1.04e-09,79;UBERON:0005409,3.98e-09,47;UBERON:0003914,6.08e-09,47;UBERON:0002100,1.13e-08,90;UBERON:0000344,7.09e-08,15;UBERON:0004923,1.75e-07,24;UBERON:0009569,3.08e-07,66 | |||
|phase1_expression=3.36312578920067,6.2815573375085,7.27998783023258,3.93203474698879,4.50806156951712,5.03637815735669,6.54115393667472,0,0.281577444303333,0,0,0,0.171200729931206,0,6.99530499812892,14.3757439846776,13.9912375625629,0.315462165358238,0.411343300817216,1.27316895539409,2.29616883407888,0.0992909512008853,0,8.63959083084396,9.86459908588831,9.18771142584032,8.61523992318149,8.40337807474967,6.27077284206034,5.79669298447841,7.09537634096975,0,0,0,2.02196133825892,1.82858109894342,2.04169356262369,2.09265815368454,0,0.523523743973798,0,1.36609096991689,0,1.51076181570693,2.02753862439029,2.20256102594018,0.782391344348039,1.09012578190223,0.659058548203415,0.58328969722285,2.2397827460058,0,0,0,0,0.771778308107841,1.14613375975503,0.515672092277442,0.404632921719196,0.528990979272033,0.633831403506179,0,1.77858959222228,0,0,0,0.299600110518405,0.384218305321555,0.622137673850866,0.270011876663381,0,0.571301968807607,1.76694832761291,0,0.383381884072945,0,0,0.638436690425939,0.614426133024974,0.263772575460388,0.457438218012048,0.52091337055676,1.11673199600552,1.68828783009504,0.61119299110724,1.76777151284201,0.569486723196412,1.1183966749518,0.530083353332288,0.755715601067855,2.6087803983151,30.1148356943485,6.11974200336975,36.1601138397337,34.4381501247265,33.1539896452028,13.7635531729117,2.38602451609281,1.81850203222008,0.70667914902068,0.563373679106722,1.28326477414318,0,0,0.865964164044856,1.01343946190039,0.505524445014783,21.8091210263405,0.258937883647172,0,0.520455980298408,1.52232739156071,0.922461989024234,0.301445281105245,0.705532242814229,1.25666591329675,0,1.15679485535929,5.30766331169925,2.26473589926373,6.40440403535141,7.27312879702833,1.86391761218122,0,0.41889341362691,5.10914110417183,0,0,0.127070227073065,0.149790639404823,0,0.628271760564322,1.21677024134594,1.02286182932132,0.41557608911912,0.973447578406546,1.01839363850316,3.11017426525233,0.505445516867349,1.26265113531884,0.130120442962704,0,0.720248519221397,0.452114453507145,0.272145996605311,0.384341160854549,0.0937017245597288,0.517406741478031,0,0,0,0.219195732427575,0,1.0447564995665,0.411564272815887,0.995171334092466,0,0,0,0.207125772535502,0.234526059981096,0.540186184383045,0.473489471170421,1.18058539048442,0.617068451549513,0.697601834251224,1.87791380979733,1.98501082024188,1.48103864922132,0.985004784474571,2.67527071501324,2.48539978623065,5.48875288227627,3.35516046900929,0.420579897128254,0.617427674275707,22.4684772428983,3.70230793328962,0,0.232236671860439,0.38660238396628,0.80673409849337,0.667134131534611,1.33157938278791,4.74529061544512,0.494096864172033,1.00534083520108,2.38747766449381,3.50935356814416,2.69645822596266,4.53889904736858,7.16908583715722,0,1.37098215131675,4.50830942692322,2.44381593414377,2.32742984601151,2.24434623649019,5.69128834118316,12.8420828742254,13.6588893221996,12.0929220643365,31.1275258441506,2.16898637430922,3.34150291692445,2.69834534861824,6.28866376304359,6.51178331331525,12.2220408855082,10.64475708568,4.86405680325106,18.1210532704134,8.62609239164127,14.8856379067401,24.3389385029357,34.3507274008072,33.5473163285976,34.2534900167991,0.184753190166605,0,0.488894929326078,0.509235257325564,0.938760993154008,0.670025029767263,0.476087281772027,1.75620283072019,0,0.8858587585951,0.318909537314974,0,1.03610989119537,1.15719246865209,0,0,0,0.275936746304732,1.28440471990234,1.17211686592203,0.327869890753351,2.27223834483936,0,0,0.430846795465598,0.238968797952552,0,0.566153061577665,1.61924280669958,0.292255857911312,1.58115111178609,0.642642632843614,2.55492153374884,0.35613120733451,1.30309567482861,1.81467135269789,3.98235415019888,0.242780636154981,1.209294227859,6.03536255218874,1.47650946440386,5.22639751504677,4.9101375701962,2.90826983582004,3.20847640546249,7.58488219045958,2.10837217149998,10.3135543248187,0.340439605753788,0,0.129358683782755,1.07168517515796,0.886701168211368,2.14042581122485,0.329098041204242,0,0.23467170806371,0,0.882113592219848,0.49465875882444,0.322928853391811,0.603129249281559,0.477489376012546,0.492422699235184,4.66369338607761,0.556275906031529,9.56876932467975,0.82554747185289,3.1483069652851,16.3880557594081,9.56859594047176,11.8964650067392,0,0.279902904647316,0,8.59203556213602,0.158167996790568,1.21991680276109,0.540026704109006,2.09088296014469,1.9652630737156,2.42755823492677,3.55409859618945,5.49687478166462,2.33306951925227,0.621339313086926,1.12738587736838,0.448549638131936,0.827292452285488,1.36115831840833,0.774958940866387,1.520605129417,1.05621514781179,1.8228613878153,0.629156066554265,1.69108884578204,1.44015003128933,0,0.608175645870493,0.308132871494482,0,0.716106782669926,0.198681354781265,0.120195449519969,0,0.302899349844443,0.15241361331,0.100826185136841,0.0974578807397524,0.192423683280659,0,0.680191150845634,0,0,0.167884616364078,0.579568782096571,2.25218970541418,5.31139710375069,1.07184189539533,0,0.564751842617067,0.460325236507177,0.572895513439397,0.343706364687375,0.685082519770642,0.755393897389701,0,0.45032120322422,1.35942722695261,0,0.103787347584177,0,0.170733605754134,1.45864030240976,1.25767897576789,1.83843508450014,1.33348036680969,1.85431551515005,1.60459604795908,0.505394423527595,2.5347929989024,1.50901073108861,1.591905626988,1.60062881012173,1.55075766180156,0.952587382566147,1.39061191133827,1.54327376370964,2.06042950401653,2.20798380201596,2.05721551431249,3.19456451086807,1.90748951957857,1.88950341622027,1.97629698872194,1.60767754994185,2.56099162021882,1.57841826862706,1.49384525230448,1.68342681497322,1.06771516311757,1.37906275325789,2.04615521584845,2.01417893541756,0.964533054905707,0.249810577937946,2.33931608445408,1.50409737833809,0.57386499620653,0.441182838239031,1.85494268496337 | |phase1_expression=3.36312578920067,6.2815573375085,7.27998783023258,3.93203474698879,4.50806156951712,5.03637815735669,6.54115393667472,0,0.281577444303333,0,0,0,0.171200729931206,0,6.99530499812892,14.3757439846776,13.9912375625629,0.315462165358238,0.411343300817216,1.27316895539409,2.29616883407888,0.0992909512008853,0,8.63959083084396,9.86459908588831,9.18771142584032,8.61523992318149,8.40337807474967,6.27077284206034,5.79669298447841,7.09537634096975,0,0,0,2.02196133825892,1.82858109894342,2.04169356262369,2.09265815368454,0,0.523523743973798,0,1.36609096991689,0,1.51076181570693,2.02753862439029,2.20256102594018,0.782391344348039,1.09012578190223,0.659058548203415,0.58328969722285,2.2397827460058,0,0,0,0,0.771778308107841,1.14613375975503,0.515672092277442,0.404632921719196,0.528990979272033,0.633831403506179,0,1.77858959222228,0,0,0,0.299600110518405,0.384218305321555,0.622137673850866,0.270011876663381,0,0.571301968807607,1.76694832761291,0,0.383381884072945,0,0,0.638436690425939,0.614426133024974,0.263772575460388,0.457438218012048,0.52091337055676,1.11673199600552,1.68828783009504,0.61119299110724,1.76777151284201,0.569486723196412,1.1183966749518,0.530083353332288,0.755715601067855,2.6087803983151,30.1148356943485,6.11974200336975,36.1601138397337,34.4381501247265,33.1539896452028,13.7635531729117,2.38602451609281,1.81850203222008,0.70667914902068,0.563373679106722,1.28326477414318,0,0,0.865964164044856,1.01343946190039,0.505524445014783,21.8091210263405,0.258937883647172,0,0.520455980298408,1.52232739156071,0.922461989024234,0.301445281105245,0.705532242814229,1.25666591329675,0,1.15679485535929,5.30766331169925,2.26473589926373,6.40440403535141,7.27312879702833,1.86391761218122,0,0.41889341362691,5.10914110417183,0,0,0.127070227073065,0.149790639404823,0,0.628271760564322,1.21677024134594,1.02286182932132,0.41557608911912,0.973447578406546,1.01839363850316,3.11017426525233,0.505445516867349,1.26265113531884,0.130120442962704,0,0.720248519221397,0.452114453507145,0.272145996605311,0.384341160854549,0.0937017245597288,0.517406741478031,0,0,0,0.219195732427575,0,1.0447564995665,0.411564272815887,0.995171334092466,0,0,0,0.207125772535502,0.234526059981096,0.540186184383045,0.473489471170421,1.18058539048442,0.617068451549513,0.697601834251224,1.87791380979733,1.98501082024188,1.48103864922132,0.985004784474571,2.67527071501324,2.48539978623065,5.48875288227627,3.35516046900929,0.420579897128254,0.617427674275707,22.4684772428983,3.70230793328962,0,0.232236671860439,0.38660238396628,0.80673409849337,0.667134131534611,1.33157938278791,4.74529061544512,0.494096864172033,1.00534083520108,2.38747766449381,3.50935356814416,2.69645822596266,4.53889904736858,7.16908583715722,0,1.37098215131675,4.50830942692322,2.44381593414377,2.32742984601151,2.24434623649019,5.69128834118316,12.8420828742254,13.6588893221996,12.0929220643365,31.1275258441506,2.16898637430922,3.34150291692445,2.69834534861824,6.28866376304359,6.51178331331525,12.2220408855082,10.64475708568,4.86405680325106,18.1210532704134,8.62609239164127,14.8856379067401,24.3389385029357,34.3507274008072,33.5473163285976,34.2534900167991,0.184753190166605,0,0.488894929326078,0.509235257325564,0.938760993154008,0.670025029767263,0.476087281772027,1.75620283072019,0,0.8858587585951,0.318909537314974,0,1.03610989119537,1.15719246865209,0,0,0,0.275936746304732,1.28440471990234,1.17211686592203,0.327869890753351,2.27223834483936,0,0,0.430846795465598,0.238968797952552,0,0.566153061577665,1.61924280669958,0.292255857911312,1.58115111178609,0.642642632843614,2.55492153374884,0.35613120733451,1.30309567482861,1.81467135269789,3.98235415019888,0.242780636154981,1.209294227859,6.03536255218874,1.47650946440386,5.22639751504677,4.9101375701962,2.90826983582004,3.20847640546249,7.58488219045958,2.10837217149998,10.3135543248187,0.340439605753788,0,0.129358683782755,1.07168517515796,0.886701168211368,2.14042581122485,0.329098041204242,0,0.23467170806371,0,0.882113592219848,0.49465875882444,0.322928853391811,0.603129249281559,0.477489376012546,0.492422699235184,4.66369338607761,0.556275906031529,9.56876932467975,0.82554747185289,3.1483069652851,16.3880557594081,9.56859594047176,11.8964650067392,0,0.279902904647316,0,8.59203556213602,0.158167996790568,1.21991680276109,0.540026704109006,2.09088296014469,1.9652630737156,2.42755823492677,3.55409859618945,5.49687478166462,2.33306951925227,0.621339313086926,1.12738587736838,0.448549638131936,0.827292452285488,1.36115831840833,0.774958940866387,1.520605129417,1.05621514781179,1.8228613878153,0.629156066554265,1.69108884578204,1.44015003128933,0,0.608175645870493,0.308132871494482,0,0.716106782669926,0.198681354781265,0.120195449519969,0,0.302899349844443,0.15241361331,0.100826185136841,0.0974578807397524,0.192423683280659,0,0.680191150845634,0,0,0.167884616364078,0.579568782096571,2.25218970541418,5.31139710375069,1.07184189539533,0,0.564751842617067,0.460325236507177,0.572895513439397,0.343706364687375,0.685082519770642,0.755393897389701,0,0.45032120322422,1.35942722695261,0,0.103787347584177,0,0.170733605754134,1.45864030240976,1.25767897576789,1.83843508450014,1.33348036680969,1.85431551515005,1.60459604795908,0.505394423527595,2.5347929989024,1.50901073108861,1.591905626988,1.60062881012173,1.55075766180156,0.952587382566147,1.39061191133827,1.54327376370964,2.06042950401653,2.20798380201596,2.05721551431249,3.19456451086807,1.90748951957857,1.88950341622027,1.97629698872194,1.60767754994185,2.56099162021882,1.57841826862706,1.49384525230448,1.68342681497322,1.06771516311757,1.37906275325789,2.04615521584845,2.01417893541756,0.964533054905707,0.249810577937946,2.33931608445408,1.50409737833809,0.57386499620653,0.441182838239031,1.85494268496337 | ||
|short_description=p3@Chac2 | |short_description=p3@Chac2 | ||
}} | }} |
Latest revision as of 06:46, 27 September 2015
Short description: | p3@Chac2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Chac2_5end |
Coexpression cluster: | MCL_coexpression_mm9:8 |
Association with transcript: | 37bp_to_ENSMUST00000020553_5end |
EntrezGene: | Chac2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
digestive tract diverticulum | 1.15e-14 | 23 |
sac | 1.15e-14 | 23 |
liver | 1.16e-14 | 22 |
epithelial sac | 1.16e-14 | 22 |
digestive gland | 1.16e-14 | 22 |
epithelium of foregut-midgut junction | 1.16e-14 | 22 |
anatomical boundary | 1.16e-14 | 22 |
hepatobiliary system | 1.16e-14 | 22 |
foregut-midgut junction | 1.16e-14 | 22 |
hepatic diverticulum | 1.16e-14 | 22 |
liver primordium | 1.16e-14 | 22 |
septum transversum | 1.16e-14 | 22 |
liver bud | 1.16e-14 | 22 |
abdomen element | 1.78e-13 | 49 |
abdominal segment element | 1.78e-13 | 49 |
abdominal segment of trunk | 1.78e-13 | 49 |
abdomen | 1.78e-13 | 49 |
exocrine gland | 1.68e-11 | 25 |
exocrine system | 1.68e-11 | 25 |
mesenchyme | 3.03e-10 | 61 |
entire embryonic mesenchyme | 3.03e-10 | 61 |
trunk region element | 1.04e-09 | 79 |
gastrointestinal system | 3.98e-09 | 47 |
epithelial tube | 6.08e-09 | 47 |
trunk | 1.13e-08 | 90 |
mucosa | 7.09e-08 | 15 |
organ component layer | 1.75e-07 | 24 |
subdivision of trunk | 3.08e-07 | 66 |