Personal tools

FFCP PHASE1:Mm9::chr11:49064085..49064099,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(3 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=17308
|EntrezGene=17308
|HGNC=
|HGNC=
|TSSclassifier=NA
|UniProt=
|UniProt=
|association_with_transcript=0bp_to_ENSMUST00000129588_5end
|association_with_transcript=0bp_to_ENSMUST00000129588_5end
|cluster_id=chr11:49064085..49064099,+
|description=CAGE_peak_1_at_Mgat1_5end
|description=CAGE_peak_1_at_Mgat1_5end
|id=chr11:49064085..49064099,+
|id=chr11:49064085..49064099,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000926!5.01e-18!193;UBERON:0004120!5.01e-18!193;UBERON:0006603!5.01e-18!193;UBERON:0003104!8.22e-11!131;UBERON:0009142!8.22e-11!131;UBERON:0002204!2.16e-10!32;UBERON:0002100!7.58e-10!98;UBERON:0003081!5.08e-09!88;UBERON:0009569!2.62e-08!66;UBERON:0004872!1.47e-07!33;UBERON:0005177!2.42e-07!85;UBERON:0002371!7.80e-07!16
|ontology_enrichment_uberon=UBERON:0000926!5.01e-18!193;UBERON:0004120!5.01e-18!193;UBERON:0006603!5.01e-18!193;UBERON:0003104!8.22e-11!131;UBERON:0009142!8.22e-11!131;UBERON:0002204!2.16e-10!32;UBERON:0002100!7.58e-10!98;UBERON:0003081!5.08e-09!88;UBERON:0009569!2.62e-08!66;UBERON:0004872!1.47e-07!33;UBERON:0005177!2.42e-07!85;UBERON:0002371!7.80e-07!16
|ontology_enrichment_uberon_v019_2=UBERON:0002100,1.20e-13,90;UBERON:0002204,2.15e-10,32;UBERON:0005177,2.60e-10,79;UBERON:0003081,1.02e-08,87;UBERON:0000926,2.04e-08,120;UBERON:0004120,2.04e-08,120;UBERON:0006603,2.04e-08,120;UBERON:0009569,2.41e-08,66;UBERON:0004872,1.46e-07,33;UBERON:0002371,7.77e-07,16
|phase1_expression=6.72625157840135,2.44282785347553,0.909998478779072,2.72217790176147,2.00358291978539,1.6787927191189,2.56973904655078,7.10178278928669,10.98152032783,13.5757425266756,1.36974374580404,1.11681022593471,5.82082481766099,5.07038334030185,8.66085380720723,11.7435655086099,4.89693314689703,30.7575611224282,31.5363197293199,29.2828859740641,5.69790044012167,15.0922245825346,13.0599894569468,9.11956809922418,7.79991555628378,1.14846392823004,2.58457197695445,1.50829862880122,11.9714754257516,5.29263272495855,3.76941868114018,4.44521471421742,2.46025915033828,0,3.17736781726402,2.1610503896604,3.47087905646027,25.9489611056883,10.1573594788094,21.4644735029257,27.6468799374577,32.1031377930469,31.558172947025,22.031943145726,20.1740093126834,19.2724089769766,29.7308710852255,5.45062890951116,16.0370913396164,13.2212331370513,8.25919887589639,8.62515386189829,27.6841299995265,19.5847778343063,16.1325023588383,33.4437266846731,16.0458726365704,28.8776371675368,0.202316460859598,0.528990979272033,0.633831403506179,29.8183188220836,19.5644855144451,30.5965903875676,33.6214563272771,35.524005747305,11.6844043102178,12.6792040756113,1.76272340924412,1.08004750665353,1.47227472945967,1.14260393761521,2.20868540951614,1.22490799214954,0.575072826109418,0.919218786610021,2.20231761998777,0.766124028511126,0.614426133024974,1.05509030184155,1.00636407962651,1.04182674111352,1.95428099300967,1.68828783009504,1.5279824777681,0.883885756421003,1.42371680799103,1.1183966749518,5.14938114665652,6.34801104896998,61.7411360934574,36.1378028332182,1.3599426674155,0,3.89865850468601,2.24013443548668,7.3031098468511,10.5666799998396,11.950156211732,13.4269038313929,4.50698943285378,2.56652954828636,0,14.2213340630666,6.92771331235885,10.1343946190039,13.6491600153991,4.45317130904334,16.572024553419,17.5161724096493,15.9606500624845,18.5723941770406,20.0635482612771,22.4576734423408,13.6402900277418,15.4569907335501,17.0564527736718,7.95296463059514,16.8076004870476,10.676612096529,13.471332626084,5.81850303762267,7.45567044872489,1.17112318804619,0.628340120440365,7.66371165625774,18.8109745474295,17.3971791988088,17.9169020173021,0.748953197024114,1.83000241127451,0.753926112677186,1.04294592115366,1.02286182932132,0.62336413367868,1.46017136760982,7.94347038032467,12.3162900903992,3.53811861807145,3.78795340595653,3.25301107406759,4.59804208866946,5.04173963454978,3.76762044589288,4.21826294738233,3.45907044769094,4.02917415606834,4.13925393182425,2.80238390812695,3.02569728268511,5.27853372491847,8.54863356467542,7.78532297831674,9.4028084960985,10.4948889568051,5.17489093728082,19.6619692447706,15.4408744268829,13.0715209721973,4.97101854085205,6.80125573945179,6.84235833551856,4.97163944728941,8.65762619688577,9.10175966035532,9.30135779001631,9.38956904898667,12.2603609485528,10.6963902443762,14.7750717671186,10.4578764314154,13.0117988808546,10.9775057645525,13.0180226197561,1.47202963994889,1.85228302282712,1.32167513193519,3.43785736662608,3.83918850963421,5.10920678092965,5.67016829817211,2.01683524623343,4.66993892074228,5.32631753115166,4.74529061544512,5.59976446061637,4.52403375840485,4.37704238490532,4.48417400373976,5.39291645192533,4.75503709724327,4.58024928485045,8.91439134479484,4.79843752960861,6.76246414038483,7.53509913027663,9.11576689687841,10.8710520829994,13.0899631847213,10.3327103585722,9.41992367048249,10.1185674415876,8.00422093135302,7.17433954579204,5.89676985339609,5.8464149220062,6.8972441272091,8.92355491083942,12.4766667372896,15.5355914223438,8.75530224585191,6.04035109013779,23.0029130443767,14.8856379067401,13.1055822708115,12.1237861414614,6.99649912735457,6.27176577772377,21.6161232494927,5.11626811780309,7.00749398700711,6.28056817368196,7.27539769694356,14.2380318825543,25.4706695748035,22.6355031515047,20.0196633014863,25.0255099303116,26.3100368284854,24.5794972073607,19.5134029508462,18.5150794984335,24.1266054302836,14.6854534631052,14.7529281905711,8.82997588175144,0.80275294993896,1.05490517932983,6.39346286969034,8.83648245215305,6.94118082715765,7.41833614163613,4.95473814785438,5.01834475700359,6.90675889655422,6.22768367735431,4.45291771842384,7.01414058987149,4.74345333535828,0.963963949265421,6.38730383437209,9.43747699436453,7.16702621155735,7.4236555337641,18.5843193675948,8.49732226542435,7.55808892411878,7.35559811048003,10.6308681437078,12.604841065701,10.3371317267288,15.9954840970102,13.9033977570041,12.009396801561,14.7586052004998,8.25084345985495,4.42571487479924,4.68158844481407,5.95049945400671,4.71541477069503,5.14286677562593,6.95638388648075,5.92376474167636,10.656273219011,19.7124234773517,18.6412222360162,3.96951116498931,5.11147384118588,6.62004149453213,5.30753739367772,6.32673423216623,6.23735419031233,4.37221254944776,1.66882771809459,19.4792804109552,11.7640514739037,12.0376442790313,13.1857919903284,11.6190093562871,11.4389086603261,15.4680371294408,17.0740771834863,14.2345973018557,5.72802370809068,4.11236791655476,6.09958401380546,6.58832579012988,8.15444354456428,7.42432716737004,8.22672512947406,6.4469695465762,8.37619014348895,5.31421390496351,15.5334828271731,0.56369293868419,4.78452947340732,4.46737924234164,5.25018208528929,6.84547064431975,6.42033276864957,4.92900402312167,7.81226309063701,2.41176492179135,0.966336483304024,1.44015003128933,7.58426689507628,10.1362607645082,7.9087437016917,8.18501184760109,10.5625750443814,8.54329825559439,6.12996792551841,4.87375439676105,5.35122184725182,6.70619898563999,5.44461399738939,6.23730436734416,5.48407497349878,7.24636793525727,8.38902419376282,8.87943813496259,4.75483440030221,11.2482692963933,5.60249822693352,19.7066599223741,7.69236821922513,6.64541975145104,6.01886524842436,1.6942555278512,0.920650473014354,1.71868654031819,0.859265911718438,0.685082519770642,0.755393897389701,0.675022500231806,2.2516060161211,0.906284817968409,1.55328093525546,1.55681021376265,5.98537310101547,7.17081144167364,8.0225216632537,2.30574478890781,3.30918315210025,8.00088220085815,7.0051919461224,10.9112531261217,9.6024940470243,7.85785829659743,6.22466926574051,6.74218853783153,6.40251524048693,5.68611142660571,9.0495801343784,7.18482820858104,6.36600427530227,5.35711671044299,7.65434384698866,5.48590803816665,7.98641127717019,9.29901140794552,8.1393993314104,4.89368778159719,6.43071019976741,8.96347067076586,7.62902163169744,6.11118512306378,5.61142271657738,6.28765596058123,6.79680928391388,6.54769669071503,6.66228417099654,7.71626443924566,9.99242311751784,8.65546951248011,11.3881658645598,11.4772999241306,10.5883881177367,10.2021847672985
|phase1_expression=6.72625157840135,2.44282785347553,0.909998478779072,2.72217790176147,2.00358291978539,1.6787927191189,2.56973904655078,7.10178278928669,10.98152032783,13.5757425266756,1.36974374580404,1.11681022593471,5.82082481766099,5.07038334030185,8.66085380720723,11.7435655086099,4.89693314689703,30.7575611224282,31.5363197293199,29.2828859740641,5.69790044012167,15.0922245825346,13.0599894569468,9.11956809922418,7.79991555628378,1.14846392823004,2.58457197695445,1.50829862880122,11.9714754257516,5.29263272495855,3.76941868114018,4.44521471421742,2.46025915033828,0,3.17736781726402,2.1610503896604,3.47087905646027,25.9489611056883,10.1573594788094,21.4644735029257,27.6468799374577,32.1031377930469,31.558172947025,22.031943145726,20.1740093126834,19.2724089769766,29.7308710852255,5.45062890951116,16.0370913396164,13.2212331370513,8.25919887589639,8.62515386189829,27.6841299995265,19.5847778343063,16.1325023588383,33.4437266846731,16.0458726365704,28.8776371675368,0.202316460859598,0.528990979272033,0.633831403506179,29.8183188220836,19.5644855144451,30.5965903875676,33.6214563272771,35.524005747305,11.6844043102178,12.6792040756113,1.76272340924412,1.08004750665353,1.47227472945967,1.14260393761521,2.20868540951614,1.22490799214954,0.575072826109418,0.919218786610021,2.20231761998777,0.766124028511126,0.614426133024974,1.05509030184155,1.00636407962651,1.04182674111352,1.95428099300967,1.68828783009504,1.5279824777681,0.883885756421003,1.42371680799103,1.1183966749518,5.14938114665652,6.34801104896998,61.7411360934574,36.1378028332182,1.3599426674155,0,3.89865850468601,2.24013443548668,7.3031098468511,10.5666799998396,11.950156211732,13.4269038313929,4.50698943285378,2.56652954828636,0,14.2213340630666,6.92771331235885,10.1343946190039,13.6491600153991,4.45317130904334,16.572024553419,17.5161724096493,15.9606500624845,18.5723941770406,20.0635482612771,22.4576734423408,13.6402900277418,15.4569907335501,17.0564527736718,7.95296463059514,16.8076004870476,10.676612096529,13.471332626084,5.81850303762267,7.45567044872489,1.17112318804619,0.628340120440365,7.66371165625774,18.8109745474295,17.3971791988088,17.9169020173021,0.748953197024114,1.83000241127451,0.753926112677186,1.04294592115366,1.02286182932132,0.62336413367868,1.46017136760982,7.94347038032467,12.3162900903992,3.53811861807145,3.78795340595653,3.25301107406759,4.59804208866946,5.04173963454978,3.76762044589288,4.21826294738233,3.45907044769094,4.02917415606834,4.13925393182425,2.80238390812695,3.02569728268511,5.27853372491847,8.54863356467542,7.78532297831674,9.4028084960985,10.4948889568051,5.17489093728082,19.6619692447706,15.4408744268829,13.0715209721973,4.97101854085205,6.80125573945179,6.84235833551856,4.97163944728941,8.65762619688577,9.10175966035532,9.30135779001631,9.38956904898667,12.2603609485528,10.6963902443762,14.7750717671186,10.4578764314154,13.0117988808546,10.9775057645525,13.0180226197561,1.47202963994889,1.85228302282712,1.32167513193519,3.43785736662608,3.83918850963421,5.10920678092965,5.67016829817211,2.01683524623343,4.66993892074228,5.32631753115166,4.74529061544512,5.59976446061637,4.52403375840485,4.37704238490532,4.48417400373976,5.39291645192533,4.75503709724327,4.58024928485045,8.91439134479484,4.79843752960861,6.76246414038483,7.53509913027663,9.11576689687841,10.8710520829994,13.0899631847213,10.3327103585722,9.41992367048249,10.1185674415876,8.00422093135302,7.17433954579204,5.89676985339609,5.8464149220062,6.8972441272091,8.92355491083942,12.4766667372896,15.5355914223438,8.75530224585191,6.04035109013779,23.0029130443767,14.8856379067401,13.1055822708115,12.1237861414614,6.99649912735457,6.27176577772377,21.6161232494927,5.11626811780309,7.00749398700711,6.28056817368196,7.27539769694356,14.2380318825543,25.4706695748035,22.6355031515047,20.0196633014863,25.0255099303116,26.3100368284854,24.5794972073607,19.5134029508462,18.5150794984335,24.1266054302836,14.6854534631052,14.7529281905711,8.82997588175144,0.80275294993896,1.05490517932983,6.39346286969034,8.83648245215305,6.94118082715765,7.41833614163613,4.95473814785438,5.01834475700359,6.90675889655422,6.22768367735431,4.45291771842384,7.01414058987149,4.74345333535828,0.963963949265421,6.38730383437209,9.43747699436453,7.16702621155735,7.4236555337641,18.5843193675948,8.49732226542435,7.55808892411878,7.35559811048003,10.6308681437078,12.604841065701,10.3371317267288,15.9954840970102,13.9033977570041,12.009396801561,14.7586052004998,8.25084345985495,4.42571487479924,4.68158844481407,5.95049945400671,4.71541477069503,5.14286677562593,6.95638388648075,5.92376474167636,10.656273219011,19.7124234773517,18.6412222360162,3.96951116498931,5.11147384118588,6.62004149453213,5.30753739367772,6.32673423216623,6.23735419031233,4.37221254944776,1.66882771809459,19.4792804109552,11.7640514739037,12.0376442790313,13.1857919903284,11.6190093562871,11.4389086603261,15.4680371294408,17.0740771834863,14.2345973018557,5.72802370809068,4.11236791655476,6.09958401380546,6.58832579012988,8.15444354456428,7.42432716737004,8.22672512947406,6.4469695465762,8.37619014348895,5.31421390496351,15.5334828271731,0.56369293868419,4.78452947340732,4.46737924234164,5.25018208528929,6.84547064431975,6.42033276864957,4.92900402312167,7.81226309063701,2.41176492179135,0.966336483304024,1.44015003128933,7.58426689507628,10.1362607645082,7.9087437016917,8.18501184760109,10.5625750443814,8.54329825559439,6.12996792551841,4.87375439676105,5.35122184725182,6.70619898563999,5.44461399738939,6.23730436734416,5.48407497349878,7.24636793525727,8.38902419376282,8.87943813496259,4.75483440030221,11.2482692963933,5.60249822693352,19.7066599223741,7.69236821922513,6.64541975145104,6.01886524842436,1.6942555278512,0.920650473014354,1.71868654031819,0.859265911718438,0.685082519770642,0.755393897389701,0.675022500231806,2.2516060161211,0.906284817968409,1.55328093525546,1.55681021376265,5.98537310101547,7.17081144167364,8.0225216632537,2.30574478890781,3.30918315210025,8.00088220085815,7.0051919461224,10.9112531261217,9.6024940470243,7.85785829659743,6.22466926574051,6.74218853783153,6.40251524048693,5.68611142660571,9.0495801343784,7.18482820858104,6.36600427530227,5.35711671044299,7.65434384698866,5.48590803816665,7.98641127717019,9.29901140794552,8.1393993314104,4.89368778159719,6.43071019976741,8.96347067076586,7.62902163169744,6.11118512306378,5.61142271657738,6.28765596058123,6.79680928391388,6.54769669071503,6.66228417099654,7.71626443924566,9.99242311751784,8.65546951248011,11.3881658645598,11.4772999241306,10.5883881177367,10.2021847672985
|short_description=p1@Mgat1
|short_description=p1@Mgat1
}}
}}

Latest revision as of 14:27, 1 October 2015

Short description:p1@Mgat1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Mgat1_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_ENSMUST00000129588_5end
EntrezGene:Mgat1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Mgat1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G76.73
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I52.44
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.91
CD326+ enterocyte, pool1.CNhs13542.11848-124I32.72
CD326+ enterocyte, pool2.CNhs13197.11849-124I42.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I71.68
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I82.57
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E97.10
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E710.98
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F213.58
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E61.37
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F11.12
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E45.82
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E85.07
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A18.66
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A311.74
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A54.90
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A230.76
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A431.54
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A629.28
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A35.70
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H215.09
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I913.06
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D19.12
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D27.80
GP2+ M cell, pool1.CNhs13228.11845-124H91.15
GP2+ M cell, pool2.CNhs13231.11846-124I12.58
GP2+ M cell, pool3.CNhs13240.11847-124I21.51
Ileum epithelium, pool1.CNhs13199.10252-104B911.97
Ileum epithelium, pool2.CNhs13232.10253-104C15.29
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C83.77
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I34.45
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G62.46
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F53.18
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F62.16
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F73.47
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G825.95
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H110.16
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H321.46
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G927.65
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H232.10
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H431.56
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D822.03
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D920.17
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B319.27
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B729.73
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C25.45
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B816.04
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C313.22
Mouse Astrocytes, donor2.CNhs12078.11552-120C48.26
Mouse Astrocytes, donor3.CNhs12107.11633-122C48.63
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A227.68
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I919.58
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A116.13
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C133.44
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E116.05
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C528.88
Mouse Granule cells, donor1.CNhs12131.11713-123C30.20
Mouse Granule cells, donor2.CNhs12357.11731-123E30.53
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C629.82
Mouse Meningeal cells, donor3.CNhs12109.11639-122D119.56
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C730.60
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E733.62
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D235.52
Mouse Microglia, donor1.CNhs12629.11718-123C811.68
Mouse Microglia, donor2.CNhs12634.11736-123E812.68
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.76
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.08
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.47
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F11.14
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D52.21
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.22
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.58
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D32.20
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.77
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.61
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.06
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.01
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.04
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.95
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.69
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.53
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.88
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.42
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E11.12
Mouse Schwann, donor1.CNhs12507.11728-123D95.15
Mouse Schwann, donor2.CNhs12573.11746-123F96.35
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G361.74
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F736.14
Mouse hepatocyte, donor1.CNhs13078.11714-123C41.36
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F43.90
Mouse hepatocyte, donor8.CNhs13091.11824-124F62.24
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A77.30
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I710.57
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E311.95
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I813.43
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G64.51
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H12.57
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B614.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G16.93
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G210.13
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G313.65
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B64.45
accessory axillary lymph node, adult.CNhs10475.1063-29H916.57
adrenal gland, adult.CNhs10508.49-24D717.52
adrenal gland, embryo E14.CNhs11038.406-44C515.96
adrenal gland, embryo E16.CNhs11004.1254-43D618.57
adrenal gland, embryo E17.CNhs11043.1263-45I120.06
adrenal gland, embryo E18.CNhs11026.1262-18F522.46
adrenal gland, neonate N00.CNhs11191.1311-23C113.64
adrenal gland, neonate N25.CNhs11223.1377-27I315.46
amnion, adult pregnant day17.5.CNhs10488.583-22A817.06
aorta, adult.CNhs10498.46-23H17.95
bone (os femoris), adult.CNhs10483.56-12G216.81
bone (os femoris), neonate N02.CNhs11227.1985-43F510.68
bone (os femoris), neonate N16.CNhs11225.1525-43A613.47
bone (os femoris), neonate N20.CNhs11195.1350-25C35.82
cecum, adult.CNhs10467.37-13H47.46
cerebellum, adult.CNhs10494.15-8B21.17
cerebellum, neonate N30.CNhs11135.1395-42I20.63
colon, adult.CNhs10468.36-18H77.66
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C718.81
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D117.40
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D417.92
corpora quadrigemina, adult.CNhs10501.16-22A40.75
corpus striatum, adult.CNhs10487.19-21D81.83
corpus striatum, neonate N00.CNhs11226.630-43F10.75
cortex, adult.CNhs10473.12-14D51.04
cortex, neonate N30.CNhs11107.1392-42F21.02
diencephalon, adult.CNhs10482.20-12F20.62
diencephalon, neonate N30.CNhs11201.1388-42B21.46
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B17.94
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A212.32
epididymis, adult.CNhs10490.58-23B23.54
eyeball, adult.CNhs10484.31-12G43.79
eyeball, embryo E12.CNhs11016.345-16C63.25
eyeball, embryo E14.CNhs10521.399-16E24.60
eyeball, embryo E15.CNhs10593.426-16C95.04
eyeball, embryo E17.CNhs11023.1261-18D43.77
eyeball, neonate N00.CNhs11207.633-15C64.22
eyeball, neonate N01.CNhs11140.1532-43E73.46
eyeball, neonate N02.CNhs11205.1551-44G84.03
eyeball, neonate N16.CNhs11188.777-19A24.14
forelimb, embryo E11.CNhs10596.335-25E22.80
forelimb, embryo E12.CNhs10600.359-14H23.03
forelimb, embryo E13.CNhs10589.384-1E25.28
forelimb, embryo E14.CNhs10577.413-26A88.55
forelimb, embryo E15.CNhs11007.437-20E77.79
forelimb, embryo E17.CNhs10598.1517-43C49.40
forelimb, embryo E18.CNhs11008.1520-43B510.49
gonad, embryo E13.CNhs11044.1564-45I65.17
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C819.66
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D215.44
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D513.07
heart, embryo E11.CNhs10586.331-24E94.97
heart, embryo E12.CNhs11015.353-12F56.80
heart, embryo E13.CNhs11013.376-3I96.84
heart, embryo E14.CNhs10597.403-26D44.97
heart, embryo E15.CNhs11017.431-16C88.66
heart, embryo E16.CNhs11021.457-17C69.10
heart, embryo E17.CNhs11025.479-18E59.30
heart, embryo E18.CNhs11030.1283-20G39.39
heart, neonate N00.CNhs11213.639-21E312.26
heart, neonate N03.CNhs11221.1349-25I210.70
heart, neonate N10.CNhs11118.749-24G114.78
heart, neonate N16.CNhs11209.782-15G110.46
heart, neonate N20.CNhs11127.821-26I613.01
heart, neonate N25.CNhs11196.1351-25D310.98
heart, neonate N30.CNhs11202.1390-42D213.02
hippocampus, adult.CNhs10478.13-16E81.47
hippocampus, neonate N00.CNhs11228.627-43G11.85
intestinal mucosa, adult.CNhs10506.860-29I31.32
intestine, adult.CNhs10496.178-9A33.44
intestine, embryo E12.CNhs11019.1251-16I53.84
intestine, embryo E13.CNhs11010.381-16D55.11
intestine, embryo E15.CNhs10602.976-16D85.67
intestine, embryo E16.CNhs10585.463-22H42.02
intestine, embryo E17.CNhs10582.482-18D34.67
intestine, embryo E18.CNhs10526.1289-20F75.33
intestine, neonate N00.CNhs11126.644-26D14.75
intestine, neonate N01.CNhs11192.1322-23E95.60
intestine, neonate N06.CNhs11102.688-20B84.52
intestine, neonate N07.CNhs11095.720-20F24.38
intestine, neonate N10.CNhs11098.755-23A54.48
intestine, neonate N20.CNhs11187.827-18D15.39
intestine, neonate N25.CNhs11121.1352-25E34.76
intestine, neonate N30.CNhs11131.1384-42G14.58
kidney, embryo E14.CNhs10606.411-4I98.91
kidney, embryo E15.CNhs10997.434-16F84.80
kidney, embryo E16.CNhs10584.464-22A56.76
kidney, embryo E17.CNhs11028.483-18I27.54
kidney, embryo E18.CNhs11001.1288-20C79.12
kidney, neonate N00.CNhs11214.646-21G710.87
kidney, neonate N10.CNhs11206.758-6D513.09
kidney, neonate N20.CNhs11113.832-19I110.33
kidney, neonate N25.CNhs11122.1353-25F39.42
kidney, neonate N30.CNhs11203.1385-42H110.12
liver, adult pregnant day01.CNhs10466.508-5B28.00
liver, embryo E12.CNhs10601.355-15F87.17
liver, embryo E13.CNhs10524.378-3H65.90
liver, embryo E14.CNhs10594.409-16E15.85
liver, embryo E15.CNhs10520.433-16D76.90
liver, embryo E16.CNhs10523.462-17F58.92
liver, embryo E17.CNhs10510.481-18A312.48
liver, embryo E18.CNhs10579.499-43G415.54
liver, neonate N00.CNhs11117.641-24F48.76
liver, neonate N03.CNhs11123.1345-25G26.04
liver, neonate N06.CNhs11101.684-20A823.00
liver, neonate N07.CNhs11103.716-20H214.89
liver, neonate N10.CNhs11115.751-24B913.11
liver, neonate N20.CNhs11220.823-25A312.12
liver, neonate N25.CNhs11198.1368-26H17.00
liver, neonate N30.CNhs11106.1382-42D16.27
lung, adult.CNhs10474.28-22B121.62
lung, embryo E12.CNhs10522.354-16G25.12
lung, embryo E14.CNhs10604.404-26F87.01
lung, embryo E15.CNhs11020.432-17C56.28
lung, embryo E16.CNhs10998.458-17B67.28
lung, embryo E17.CNhs10605.480-44A614.24
lung, embryo E18.CNhs10583.1287-20I625.47
lung, neonate N00.CNhs11224.640-42C622.64
lung, neonate N06.CNhs11212.683-20E520.02
lung, neonate N07.CNhs11111.715-19A325.03
lung, neonate N10.CNhs11219.750-23E626.31
lung, neonate N20.CNhs11109.822-18A424.58
lung, neonate N25.CNhs11119.1359-25C719.51
lung, neonate N30.CNhs11133.1394-42H218.52
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A124.13
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A114.69
mammary gland, adult lactating day02.CNhs10480.595-22B614.75
mammary gland, adult pregnant day19.CNhs10476.588-5H28.83
medulla oblongata, adult.CNhs10477.17-12C20.80
medulla oblongata, neonate N30.CNhs11200.1396-42A31.05
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C76.39
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C28.84
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E16.94
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E27.42
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E34.95
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D75.02
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D86.91
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D96.23
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D44.45
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D57.01
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D64.74
olfactory brain, adult.CNhs10489.18-22I90.96
ovary, adult.CNhs10507.91-2I76.39
ovary, embryo E18.CNhs11040.505-44H79.44
ovary, neonate N00.CNhs11217.1299-22I47.17
oviduct, adult pregnant day01.CNhs10500.988-6G67.42
pancreas, adult.CNhs10486.34-16E418.58
pancreas, embryo E14.CNhs11012.405-44F48.50
pancreas, embryo E15.CNhs11042.1556-45F27.56
pancreas, embryo E16.CNhs11003.460-26E57.36
pancreas, embryo E17.CNhs10599.1558-45G310.63
pancreas, embryo E18.CNhs10580.1535-43I712.60
pancreas, neonate N00.CNhs11105.645-26G910.34
pancreas, neonate N01.CNhs11138.1531-43D716.00
pancreas, neonate N02.CNhs11139.1539-43D813.90
pancreas, neonate N16.CNhs11136.787-43B612.01
pancreas, neonate N25.CNhs11094.1555-45E214.76
pancreas, neonate N30.CNhs11182.1548-44H58.25
pituitary gland, adult.CNhs10493.21-1G84.43
pituitary gland, embryo E12.CNhs11018.346-16E64.68
pituitary gland, embryo E13.CNhs11009.370-44C75.95
pituitary gland, embryo E14.CNhs11037.398-44A54.72
pituitary gland, embryo E15.CNhs10592.427-16B95.14
pituitary gland, embryo E16.CNhs11036.449-43F66.96
pituitary gland, embryo E17.CNhs11039.1265-44F55.92
pituitary gland, neonate N00.CNhs11190.1308-22E910.66
placenta, adult pregnant day10.CNhs10472.539-13I719.71
placenta, adult pregnant day17.CNhs10464.577-18G318.64
prostate, adult.CNhs10470.859-1F83.97
skin, adult.CNhs10492.30-1C35.11
skin, neonate N00.CNhs11124.650-25G46.62
skin, neonate N03.CNhs11215.662-22H35.31
skin, neonate N06.CNhs11097.693-20I56.33
skin, neonate N10.CNhs11108.762-6C46.24
small intestine, neonate N16.CNhs11114.790-21I14.37
spinal cord, adult.CNhs10505.24-13C91.67
spleen, adult.CNhs10465.25-2G219.48
spleen, embryo E16.CNhs11035.461-43C111.76
spleen, embryo E18.CNhs11011.1271-21F212.04
spleen, neonate N10.CNhs11116.752-24D113.19
spleen, neonate N20.CNhs11112.824-19H111.62
spleen, neonate N25.CNhs11099.1354-25G311.44
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C615.47
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C917.07
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D314.23
stomach, adult.CNhs10503.33-1H65.73
stomach, embryo E12.CNhs10588.356-43E34.11
stomach, embryo E15.CNhs10603.1252-16G86.10
stomach, embryo E16.CNhs11022.459-17D46.59
stomach, embryo E17.CNhs11006.1035-18D58.15
stomach, embryo E18.CNhs10999.1286-20C67.42
stomach, neonate N03.CNhs11193.1340-24B88.23
stomach, neonate N07.CNhs11210.718-18A96.45
stomach, neonate N25.CNhs11104.1355-25E48.38
stomach, neonate N30.CNhs11134.1386-42I15.31
submandibular gland, adult.CNhs10469.59-29C115.53
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F54.78
testis, embryo E15.CNhs11034.443-27C54.47
testis, embryo E16.CNhs11033.470-26G55.25
testis, embryo E17.CNhs11029.486-18I56.85
testis, embryo E18.CNhs11027.503-18G56.42
testis, neonate N00.CNhs11189.1300-22B74.93
testis, neonate N07.CNhs11222.726-26I47.81
testis, neonate N10.CNhs11204.763-44D92.41
testis, neonate N20.CNhs11110.839-18H30.97
testis, neonate N30.CNhs11130.1391-42E21.44
thymus, adult.CNhs10471.38-12B57.58
thymus, embryo E14.CNhs11041.402-44I410.14
thymus, embryo E15.CNhs11005.430-45I27.91
thymus, embryo E16.CNhs11002.456-26C58.19
thymus, embryo E17.CNhs10581.478-18C110.56
thymus, embryo E18.CNhs10595.1273-19G48.54
thymus, neonate N02.CNhs11181.1541-43F86.13
thymus, neonate N03.CNhs11137.2104-43C74.87
thymus, neonate N06.CNhs11197.681-26C45.35
thymus, neonate N07.CNhs11211.713-19D36.71
thymus, neonate N10.CNhs11194.748-24E45.44
thymus, neonate N20.CNhs11186.820-7A26.24
thymus, neonate N25.CNhs11125.1362-25G75.48
thymus, neonate N30.CNhs11132.1393-42G27.25
tongue, adult.CNhs10499.32-1B48.39
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H38.88
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F74.75
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G511.25
urinary bladder, adult.CNhs10481.879-12E45.60
uterus, adult pregnant day19.CNhs10497.590-15F519.71
uterus, adult.CNhs10509.92-27E57.69
vagina, adult.CNhs10502.89-27D56.65
vesicular gland, adult.CNhs10491.51-27F86.02
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11.69
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.92
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31.72
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.86
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.69
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.76
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A72.25
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.91
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A91.55
whole body, embryo E11.CNhs11014.324-5I81.56
whole body, embryo E12.CNhs10587.857-27C95.99
whole body, embryo E13.CNhs10512.372-23H27.17
whole body, embryo E14.5.CNhs10578.420-27D28.02
whole body, embryo E14.CNhs10519.395-14B12.31
whole body, embryo E16.CNhs10514.453-14F23.31
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G58.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G57.01
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G510.91
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G59.60
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G57.86
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G56.22
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G56.74
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G56.40
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G55.69
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G59.05
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G57.18
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G56.37
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G55.36
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G57.65
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G55.49
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G57.99
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G59.30
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G58.14
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G54.89
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G56.43
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G58.96
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G57.63
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G56.11
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G55.61
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G56.29
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G56.80
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G56.55
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G56.66
whole body, embryo E17.5.CNhs10513.490-9F97.72
whole body, embryo E17.CNhs10517.475-3I59.99
whole body, embryo E18.CNhs10516.493-3B38.66
whole body, neonate N00.CNhs10525.657-19C211.39
whole body, neonate N01.CNhs10576.659-23C611.48
whole body, neonate N06.CNhs10515.692-21D110.59
whole body, neonate N10.CNhs10518.761-6B410.20





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
trunk1.20e-1390
musculoskeletal system2.15e-1032
trunk region element2.60e-1079
lateral plate mesoderm1.02e-0887
mesoderm2.04e-08120
mesoderm-derived structure2.04e-08120
presumptive mesoderm2.04e-08120
subdivision of trunk2.41e-0866
splanchnic layer of lateral plate mesoderm1.46e-0733
bone marrow7.77e-0716
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr11:49064085..49064099,%2B&oldid=4307254"