FFCP PHASE1:Mm9::chr11:51449350..51449361,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=66089 | |EntrezGene=66089 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1970 | |||
|TSSclassifier=NA | |||
|UniProt=Q91YQ7,A2AA63 | |UniProt=Q91YQ7,A2AA63 | ||
|association_with_transcript=36bp_to_ENSMUST00000001081,NM_025346,uc007iud.1_5end | |association_with_transcript=36bp_to_ENSMUST00000001081,NM_025346,uc007iud.1_5end | ||
|cluster_id=chr11:51449350..51449361,- | |||
|description=CAGE_peak_4_at_Rmnd5b_5end | |description=CAGE_peak_4_at_Rmnd5b_5end | ||
|id=chr11:51449350..51449361,- | |id=chr11:51449350..51449361,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003133!2.87e-09!24;UBERON:0005156!3.37e-09!26;UBERON:0000990!3.37e-09!26;UBERON:0000991!1.19e-08!18;UBERON:0005564!1.19e-08!18;UBERON:0004176!4.02e-08!17;UBERON:0009196!4.02e-08!17;UBERON:0009117!4.02e-08!17;UBERON:0000473!1.46e-07!14 | |ontology_enrichment_uberon=UBERON:0003133!2.87e-09!24;UBERON:0005156!3.37e-09!26;UBERON:0000990!3.37e-09!26;UBERON:0000991!1.19e-08!18;UBERON:0005564!1.19e-08!18;UBERON:0004176!4.02e-08!17;UBERON:0009196!4.02e-08!17;UBERON:0009117!4.02e-08!17;UBERON:0000473!1.46e-07!14 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,1.24e-10,14;UBERON:0003135,6.42e-10,15;UBERON:0003101,2.72e-09,16;UBERON:0000079,2.72e-09,16;UBERON:0004176,9.70e-09,17;UBERON:0009196,9.70e-09,17;UBERON:0009117,9.70e-09,17;UBERON:0000991,3.01e-08,18;UBERON:0005564,3.01e-08,18 | |||
|phase1_expression=0,0.697950815278722,0.454999239389536,0,0.500895729946347,0,0,0,0.985521055061667,0.936258105287974,0.171217968225505,0,0.171200729931206,0.262261207256992,0,0,0,0.473193248037357,0.137114433605739,0,1.36069264241712,0.794327609607082,0.522399578277871,0.159992422793407,0.22940928106717,0,0,0.646413698057667,0.190023419456374,0,0,0,0,0,0.288851619751275,0,0,0.418531630736908,0.7813353445238,0,1.17646297606203,0.683045484958446,0,0.125896817975577,0.101376931219515,0,0.782391344348039,0,0.219686182734472,0.388859798148567,0.279972843250725,0,0.167782606057736,0,0.336093799142464,0,0,0,0.404632921719196,0,0.633831403506179,0.338844532069132,0,0.899899717281399,0,0,0,0,0.207379224616955,0.405017814995072,0,0.571301968807607,0,0.122490799214954,0.287536413054709,0.919218786610021,0,0.127687338085188,0.153606533256243,0.263772575460388,0.182975287204819,0,0,0,0.15279824777681,0,0.427115042397309,0.186399445825301,0.151452386666368,0.151143120213571,0,0,0,0.539703191637817,0,0.448026887097336,0.140444420131752,0.170430322578058,0.259786004602869,0.70667914902068,0.14084341977668,0,0,0,0.216491041011214,0.506719730950197,0.505524445014783,0.34255163915718,0,0.593768556259299,0,0.304465478312141,0.230615497256059,0.150722640552623,0.470354828542819,0.251333182659351,0.247194967734374,0,0,0.161766849947409,0,0,0,0.292780797011547,0.83778682725382,0,1.1981512450592,1.19980546198682,1.52484272487678,0.449371918214468,0.915001205637253,0.376963056338593,0.347648640384553,0.255715457330331,0,0.324482526135515,0.407357455401265,0.124406970610093,0,0.210441855886474,0.260240885925407,0.229902104433473,0,0.150704817835715,0.340182495756639,0.12811372028485,0.468508622798644,0.258703370739016,0.215567992932842,0.756424320671277,0.351902248327898,0.657587197282725,0.278047249225598,0.348252166522167,0,0.796137067273973,0.702213187313235,0.772043721344145,0.284163499395593,0.207125772535502,0,0,0.23674473558521,0,0,0,0.268273401399619,0.116765342367169,0.16455984991348,0,0.0810688095458557,0.292399974850665,0.219550115291051,0.268412837520744,0.420579897128254,0.411618449517138,0,0,0,0.464473343720877,0.38660238396628,0.201683524623343,0,0,0,0.329397909448022,0.251335208800269,0,0.19496408711912,0,0,0,0,0,0,0,0,0.0701358198903186,0.252946148497029,0,0.470996183524124,0.370191491765402,0,0,0.196558995113203,0,0,0,0,0,0.162135226775035,0,0,0,0.312037673114561,0,0,0,0.369506380333209,0.37898282354097,0,0.339490171550376,0.469380496577004,0.167506257441816,0.952174563544055,0.390267295715598,0.315270288212382,0.221464689648775,0.159454768657487,0.491589944147214,0.690739927463582,0,0,0.54390568381871,0.983528546038072,0.275936746304732,0.642202359951168,0.117211686592203,0,0,0,0,0.215423397732799,0.238968797952552,0.445597348164788,0,0,0.292255857911312,0,0,0.425820255624806,0.534196811001766,0.325773918707152,0.329940245945071,0,0.485561272309963,0,0.188605079755898,0,0,0,0,0.356497378384721,0,0,0,0,0.18006109403131,0.646793418913773,0.214337035031592,0,0.356737635204141,0.329098041204242,0,0.938686832254841,0.42366414172764,0.220528398054962,0.8244312647074,0.484393280087717,0.844380948994182,0.716234064018819,1.64140899745061,0,0.18542530201051,0,0.206386867963223,0,0,0,0,4.41943917984024,5.59805809294632,5.94259887359022,0,0.474503990371703,0,0.108005340821801,0,0.218362563746178,0,0.41326727862668,0,0,0.621339313086926,9.01908701894705,0.448549638131936,0.827292452285488,0.583353565032143,1.29159823477731,0.844780627453891,0.821500670520278,0.911430693907651,1.46803082195995,1.20792060413003,2.88030006257865,0,0.202725215290164,0.205421914329655,0.389762468933385,0.537080087002444,0,0,0,0.100966449948148,0.15241361331,0.201652370273681,0.0974578807397524,0.0962118416403295,0.350630706544707,0,0,0.448569283047378,0.167884616364078,0,0.375364950902364,0.549454872801795,0.428736758158132,0.501572104035363,0.564751842617067,0,0.572895513439397,0.515559547031063,0.685082519770642,0,0.675022500231806,0,0.906284817968409,1.03552062350364,0.207574695168353,0,0.170733605754134,0.243106717068294,0.419226325255965,0.367687016900028,0.222246727801615,0,0.64183841918363,0,0,0.188626341386076,0.187283014939765,0.192075457214608,0.17230640686684,0.476293691283074,0.231768651889711,0,0,0.147198920134397,0,0.354951612318675,0.238436189947321,0.145346416632329,0.0941093804153306,0.25384382367503,0.548783918618318,0,0.135804113845862,0,0.118635018124174,0.197008964751127,0.409231043169689,0.154936841185966,0.192906610981141,0,0.233931608445408,0,0.382576664137687,0.441182838239031,0.231867835620421 | |phase1_expression=0,0.697950815278722,0.454999239389536,0,0.500895729946347,0,0,0,0.985521055061667,0.936258105287974,0.171217968225505,0,0.171200729931206,0.262261207256992,0,0,0,0.473193248037357,0.137114433605739,0,1.36069264241712,0.794327609607082,0.522399578277871,0.159992422793407,0.22940928106717,0,0,0.646413698057667,0.190023419456374,0,0,0,0,0,0.288851619751275,0,0,0.418531630736908,0.7813353445238,0,1.17646297606203,0.683045484958446,0,0.125896817975577,0.101376931219515,0,0.782391344348039,0,0.219686182734472,0.388859798148567,0.279972843250725,0,0.167782606057736,0,0.336093799142464,0,0,0,0.404632921719196,0,0.633831403506179,0.338844532069132,0,0.899899717281399,0,0,0,0,0.207379224616955,0.405017814995072,0,0.571301968807607,0,0.122490799214954,0.287536413054709,0.919218786610021,0,0.127687338085188,0.153606533256243,0.263772575460388,0.182975287204819,0,0,0,0.15279824777681,0,0.427115042397309,0.186399445825301,0.151452386666368,0.151143120213571,0,0,0,0.539703191637817,0,0.448026887097336,0.140444420131752,0.170430322578058,0.259786004602869,0.70667914902068,0.14084341977668,0,0,0,0.216491041011214,0.506719730950197,0.505524445014783,0.34255163915718,0,0.593768556259299,0,0.304465478312141,0.230615497256059,0.150722640552623,0.470354828542819,0.251333182659351,0.247194967734374,0,0,0.161766849947409,0,0,0,0.292780797011547,0.83778682725382,0,1.1981512450592,1.19980546198682,1.52484272487678,0.449371918214468,0.915001205637253,0.376963056338593,0.347648640384553,0.255715457330331,0,0.324482526135515,0.407357455401265,0.124406970610093,0,0.210441855886474,0.260240885925407,0.229902104433473,0,0.150704817835715,0.340182495756639,0.12811372028485,0.468508622798644,0.258703370739016,0.215567992932842,0.756424320671277,0.351902248327898,0.657587197282725,0.278047249225598,0.348252166522167,0,0.796137067273973,0.702213187313235,0.772043721344145,0.284163499395593,0.207125772535502,0,0,0.23674473558521,0,0,0,0.268273401399619,0.116765342367169,0.16455984991348,0,0.0810688095458557,0.292399974850665,0.219550115291051,0.268412837520744,0.420579897128254,0.411618449517138,0,0,0,0.464473343720877,0.38660238396628,0.201683524623343,0,0,0,0.329397909448022,0.251335208800269,0,0.19496408711912,0,0,0,0,0,0,0,0,0.0701358198903186,0.252946148497029,0,0.470996183524124,0.370191491765402,0,0,0.196558995113203,0,0,0,0,0,0.162135226775035,0,0,0,0.312037673114561,0,0,0,0.369506380333209,0.37898282354097,0,0.339490171550376,0.469380496577004,0.167506257441816,0.952174563544055,0.390267295715598,0.315270288212382,0.221464689648775,0.159454768657487,0.491589944147214,0.690739927463582,0,0,0.54390568381871,0.983528546038072,0.275936746304732,0.642202359951168,0.117211686592203,0,0,0,0,0.215423397732799,0.238968797952552,0.445597348164788,0,0,0.292255857911312,0,0,0.425820255624806,0.534196811001766,0.325773918707152,0.329940245945071,0,0.485561272309963,0,0.188605079755898,0,0,0,0,0.356497378384721,0,0,0,0,0.18006109403131,0.646793418913773,0.214337035031592,0,0.356737635204141,0.329098041204242,0,0.938686832254841,0.42366414172764,0.220528398054962,0.8244312647074,0.484393280087717,0.844380948994182,0.716234064018819,1.64140899745061,0,0.18542530201051,0,0.206386867963223,0,0,0,0,4.41943917984024,5.59805809294632,5.94259887359022,0,0.474503990371703,0,0.108005340821801,0,0.218362563746178,0,0.41326727862668,0,0,0.621339313086926,9.01908701894705,0.448549638131936,0.827292452285488,0.583353565032143,1.29159823477731,0.844780627453891,0.821500670520278,0.911430693907651,1.46803082195995,1.20792060413003,2.88030006257865,0,0.202725215290164,0.205421914329655,0.389762468933385,0.537080087002444,0,0,0,0.100966449948148,0.15241361331,0.201652370273681,0.0974578807397524,0.0962118416403295,0.350630706544707,0,0,0.448569283047378,0.167884616364078,0,0.375364950902364,0.549454872801795,0.428736758158132,0.501572104035363,0.564751842617067,0,0.572895513439397,0.515559547031063,0.685082519770642,0,0.675022500231806,0,0.906284817968409,1.03552062350364,0.207574695168353,0,0.170733605754134,0.243106717068294,0.419226325255965,0.367687016900028,0.222246727801615,0,0.64183841918363,0,0,0.188626341386076,0.187283014939765,0.192075457214608,0.17230640686684,0.476293691283074,0.231768651889711,0,0,0.147198920134397,0,0.354951612318675,0.238436189947321,0.145346416632329,0.0941093804153306,0.25384382367503,0.548783918618318,0,0.135804113845862,0,0.118635018124174,0.197008964751127,0.409231043169689,0.154936841185966,0.192906610981141,0,0.233931608445408,0,0.382576664137687,0.441182838239031,0.231867835620421 | ||
|short_description=p4@Rmnd5b | |short_description=p4@Rmnd5b | ||
}} | }} |
Latest revision as of 15:30, 1 October 2015
Short description: | p4@Rmnd5b |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Rmnd5b_5end |
Coexpression cluster: | MCL_coexpression_mm9:1970 |
Association with transcript: | 36bp_to_ENSMUST00000001081, NM_025346, uc007iud.1_5end |
EntrezGene: | Rmnd5b |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
testis | 1.24e-10 | 14 |
male reproductive organ | 6.42e-10 | 15 |
male organism | 2.72e-09 | 16 |
male reproductive system | 2.72e-09 | 16 |
external genitalia | 9.70e-09 | 17 |
indifferent external genitalia | 9.70e-09 | 17 |
indifferent gonad | 9.70e-09 | 17 |
gonad | 3.01e-08 | 18 |
gonad primordium | 3.01e-08 | 18 |