FFCP PHASE1:Mm9::chr4:150227878..150227897,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=74155 | |EntrezGene=74155 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=3468 | |||
|TSSclassifier=NA | |||
|UniProt=Q99JZ7,Q3TK48 | |UniProt=Q99JZ7,Q3TK48 | ||
|association_with_transcript=-130bp_to_ENSMUST00000073600,uc008vxw.1_5end | |association_with_transcript=-130bp_to_ENSMUST00000073600,uc008vxw.1_5end | ||
|cluster_id=chr4:150227878..150227897,+ | |||
|description=CAGE_peak_3_at_Errfi1_5end | |description=CAGE_peak_3_at_Errfi1_5end | ||
|id=chr4:150227878..150227897,+ | |id=chr4:150227878..150227897,+ | ||
|ontology_enrichment_celltype=CL:0000066!4.96e-09!25;CL:0000223!2.03e-08!20;CL:0002563!3.33e-07!9;CL:0002251!3.33e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,4.88e-10,25;CL:0000239,7.72e-09,6;CL:0000677,7.72e-09,6;CL:0000584,7.72e-09,6;CL:0002563,1.15e-08,9;CL:0002251,1.15e-08,9;CL:0000223,1.69e-08,20;CL:0000075,2.14e-07,7 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!2.69e-28!59;UBERON:0000160!6.46e-27!43;UBERON:0001007!1.58e-19!128;UBERON:0001555!1.58e-19!128;UBERON:0007026!1.58e-19!128;UBERON:0004119!8.78e-19!130;UBERON:0000925!8.78e-19!130;UBERON:0006595!8.78e-19!130;UBERON:0004921!3.48e-18!126;UBERON:0004185!3.48e-18!126;UBERON:0000344!2.17e-11!15;UBERON:0001242!6.69e-10!13;UBERON:0000060!6.69e-10!13;UBERON:0001262!6.69e-10!13;UBERON:0004786!6.69e-10!13;UBERON:0002108!1.60e-07!16;UBERON:0009854!1.71e-07!23;UBERON:0009856!1.71e-07!23;UBERON:0003350!3.33e-07!9;UBERON:0004808!3.33e-07!9;UBERON:0001277!3.33e-07!9;UBERON:0002107!7.28e-07!22;UBERON:0007499!7.28e-07!22;UBERON:0006925!7.28e-07!22;UBERON:0009497!7.28e-07!22;UBERON:0000015!7.28e-07!22;UBERON:0002423!7.28e-07!22;UBERON:0006235!7.28e-07!22;UBERON:0008835!7.28e-07!22;UBERON:0003894!7.28e-07!22;UBERON:0004161!7.28e-07!22;UBERON:0008836!7.28e-07!22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005409,1.16e-30,47;UBERON:0000160,8.06e-30,31;UBERON:0001007,6.47e-17,116;UBERON:0001555,6.47e-17,116;UBERON:0007026,6.47e-17,116;UBERON:0004119,2.23e-16,118;UBERON:0000925,2.23e-16,118;UBERON:0006595,2.23e-16,118;UBERON:0004921,2.46e-15,114;UBERON:0000344,6.36e-15,15;UBERON:0001242,1.07e-12,13;UBERON:0001262,1.07e-12,13;UBERON:0004786,1.07e-12,13;UBERON:0003350,1.15e-08,9;UBERON:0004808,1.15e-08,9;UBERON:0001277,1.15e-08,9;UBERON:0004923,8.23e-08,24;UBERON:0000485,9.38e-07,11 | |||
|phase1_expression=0,9.42233600626275,11.3749809847384,55.3509506691499,44.0788242352786,5.20425742926858,2.56973904655078,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,7.51964387129011,5.04700418347774,7.46501553349526,6.03066794622705,4.30942465371778,2.28028103347649,2.52030129759931,3.76941868114018,0,0,0,0.577703239502549,1.49611180822643,1.22501613757421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220868540951614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.869593466105033,2.58127163094416,33.9985666853875,5.39703191637817,5.19821133958135,4.03224198387602,1.96622188184453,0,0,0,0,0,0,0,1.29894624606728,0.506719730950197,0.505524445014783,4.22480354960522,0,0,0,0.304465478312141,0.230615497256059,0,0.117588707135705,0,0.741584903203122,0,0,0,0,0,5.59175283654366,0,0,10.7291963187608,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150704817835715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,33.7027158643474,23.800550999719,0.213288250535234,0.928946687441754,2.06187938115349,4.84040459096022,7.78323153457046,7.03834816616469,4.74529061544512,10.3760341476127,8.29406189040889,9.74886713001639,9.16331209459865,11.6846523125049,9.51007419448655,15.1347367673319,0.379335801906163,0.114248512609729,2.25415471346161,0.610953983535943,0.581857461502877,1.61312385747733,1.89709611372772,1.03327103585722,0.941992367048249,1.48076596706161,4.44678940630723,0.83422552858047,0.589676985339609,0.899448449539415,1.01430060694251,0.72353147925725,2.29163266603278,2.30156909960649,6.80967952455149,1.37280706594041,0,0.372140947668503,0,0.505157755894224,0,0,0,0,0,0,0,0.335012514883631,0.476087281772027,0.585400943573396,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.989820737835213,2.65490276679926,1.94224508923985,0.604647113929502,1.88605079755898,1.18120757152309,0.307435147943927,5.42699415653264,0.727067458955011,0.712994756769443,0.948110273807448,2.10837217149998,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238744688006273,0,13.4081184849731,0,0,0.206386867963223,0,0,0,0,0,0,0,1.90934123603023,1.42351197111511,2.43983360552218,2.91614420218863,2.09088296014469,2.62035076495413,1.07891477107857,0.578574190077352,1.30877970992015,8.16574331738295,0,0,0,0,0,0,0,0,0.13020438484395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974578807397524,0.0962118416403295,0,0,0,0,0,0,0,0.73260649706906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486213434136588,0.419226325255965,0.183843508450014,1.55572709461131,0.824140228955577,0.320919209591815,0.505394423527595,1.52087579934144,0.943131706930381,0.936415074698824,0.512201219238954,0.516919220600519,0.952587382566147,1.27472758539341,0.964546102318525,1.23625770240992,1.17759136107518,1.37147700954166,1.06485483695602,0.238436189947321,0.726732083161643,0.846984423737976,0.761531471025089,0.73171189149109,1.57841826862706,0.271608227691724,1.12228454331548,0.355905054372522,0.492522411877817,0,0.464810523557898,0.771626443924566,0,0.467863216890817,1.50409737833809,0,0,0 | |phase1_expression=0,9.42233600626275,11.3749809847384,55.3509506691499,44.0788242352786,5.20425742926858,2.56973904655078,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,7.51964387129011,5.04700418347774,7.46501553349526,6.03066794622705,4.30942465371778,2.28028103347649,2.52030129759931,3.76941868114018,0,0,0,0.577703239502549,1.49611180822643,1.22501613757421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220868540951614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.869593466105033,2.58127163094416,33.9985666853875,5.39703191637817,5.19821133958135,4.03224198387602,1.96622188184453,0,0,0,0,0,0,0,1.29894624606728,0.506719730950197,0.505524445014783,4.22480354960522,0,0,0,0.304465478312141,0.230615497256059,0,0.117588707135705,0,0.741584903203122,0,0,0,0,0,5.59175283654366,0,0,10.7291963187608,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150704817835715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,33.7027158643474,23.800550999719,0.213288250535234,0.928946687441754,2.06187938115349,4.84040459096022,7.78323153457046,7.03834816616469,4.74529061544512,10.3760341476127,8.29406189040889,9.74886713001639,9.16331209459865,11.6846523125049,9.51007419448655,15.1347367673319,0.379335801906163,0.114248512609729,2.25415471346161,0.610953983535943,0.581857461502877,1.61312385747733,1.89709611372772,1.03327103585722,0.941992367048249,1.48076596706161,4.44678940630723,0.83422552858047,0.589676985339609,0.899448449539415,1.01430060694251,0.72353147925725,2.29163266603278,2.30156909960649,6.80967952455149,1.37280706594041,0,0.372140947668503,0,0.505157755894224,0,0,0,0,0,0,0,0.335012514883631,0.476087281772027,0.585400943573396,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.989820737835213,2.65490276679926,1.94224508923985,0.604647113929502,1.88605079755898,1.18120757152309,0.307435147943927,5.42699415653264,0.727067458955011,0.712994756769443,0.948110273807448,2.10837217149998,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238744688006273,0,13.4081184849731,0,0,0.206386867963223,0,0,0,0,0,0,0,1.90934123603023,1.42351197111511,2.43983360552218,2.91614420218863,2.09088296014469,2.62035076495413,1.07891477107857,0.578574190077352,1.30877970992015,8.16574331738295,0,0,0,0,0,0,0,0,0.13020438484395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974578807397524,0.0962118416403295,0,0,0,0,0,0,0,0.73260649706906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486213434136588,0.419226325255965,0.183843508450014,1.55572709461131,0.824140228955577,0.320919209591815,0.505394423527595,1.52087579934144,0.943131706930381,0.936415074698824,0.512201219238954,0.516919220600519,0.952587382566147,1.27472758539341,0.964546102318525,1.23625770240992,1.17759136107518,1.37147700954166,1.06485483695602,0.238436189947321,0.726732083161643,0.846984423737976,0.761531471025089,0.73171189149109,1.57841826862706,0.271608227691724,1.12228454331548,0.355905054372522,0.492522411877817,0,0.464810523557898,0.771626443924566,0,0.467863216890817,1.50409737833809,0,0,0 | ||
|short_description=p3@Errfi1 | |short_description=p3@Errfi1 | ||
}} | }} |
Latest revision as of 18:24, 26 September 2015
Short description: | p3@Errfi1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Errfi1_5end |
Coexpression cluster: | MCL_coexpression_mm9:3468 |
Association with transcript: | -130bp_to_ENSMUST00000073600, uc008vxw.1_5end |
EntrezGene: | Errfi1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 4.88e-10 | 25 |
brush border epithelial cell | 7.72e-09 | 6 |
gut absorptive cell | 7.72e-09 | 6 |
enterocyte | 7.72e-09 | 6 |
intestinal epithelial cell | 1.15e-08 | 9 |
epithelial cell of alimentary canal | 1.15e-08 | 9 |
endodermal cell | 1.69e-08 | 20 |
columnar/cuboidal epithelial cell | 2.14e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system | 1.16e-30 | 47 |
intestine | 8.06e-30 | 31 |
digestive system | 6.47e-17 | 116 |
digestive tract | 6.47e-17 | 116 |
primitive gut | 6.47e-17 | 116 |
endoderm-derived structure | 2.23e-16 | 118 |
endoderm | 2.23e-16 | 118 |
presumptive endoderm | 2.23e-16 | 118 |
subdivision of digestive tract | 2.46e-15 | 114 |
mucosa | 6.36e-15 | 15 |
intestinal mucosa | 1.07e-12 | 13 |
wall of intestine | 1.07e-12 | 13 |
gastrointestinal system mucosa | 1.07e-12 | 13 |
epithelium of mucosa | 1.15e-08 | 9 |
gastrointestinal system epithelium | 1.15e-08 | 9 |
intestinal epithelium | 1.15e-08 | 9 |
organ component layer | 8.23e-08 | 24 |
simple columnar epithelium | 9.38e-07 | 11 |