FFCP PHASE1:Mm9::chr11:67735638..67735660,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=216835 | |EntrezGene=216835 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=Q8BUM9,A6PWR8 | |UniProt=Q8BUM9,A6PWR8 | ||
|association_with_transcript=0bp_to_ENSMUST00000021288,ENSMUST00000108677,NM_173754,uc007jne.1,uc011xwq.1_5end | |association_with_transcript=0bp_to_ENSMUST00000021288,ENSMUST00000108677,NM_173754,uc007jne.1,uc011xwq.1_5end | ||
|cluster_id=chr11:67735638..67735660,- | |||
|description=CAGE_peak_2_at_Usp43_5end | |description=CAGE_peak_2_at_Usp43_5end | ||
|id=chr11:67735638..67735660,- | |id=chr11:67735638..67735660,- | ||
|ontology_enrichment_celltype=CL:0002563!8.58e-08!9;CL:0002251!8.58e-08!9 | |ontology_enrichment_celltype=CL:0002563!8.58e-08!9;CL:0002251!8.58e-08!9 | ||
|ontology_enrichment_celltype_v019_2=CL:0002563,1.51e-10,9;CL:0002251,1.51e-10,9;CL:0002076,5.54e-09,15;CL:0000066,6.48e-09,25;CL:0000239,9.23e-08,6;CL:0000677,9.23e-08,6;CL:0000584,9.23e-08,6;CL:0000223,1.04e-07,20 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!3.67e-25!43;UBERON:0005409!2.19e-23!59;UBERON:0000344!2.01e-11!15;UBERON:0001007!1.81e-10!128;UBERON:0001555!1.81e-10!128;UBERON:0007026!1.81e-10!128;UBERON:0004119!1.97e-10!130;UBERON:0000925!1.97e-10!130;UBERON:0006595!1.97e-10!130;UBERON:0001242!2.80e-10!13;UBERON:0000060!2.80e-10!13;UBERON:0001262!2.80e-10!13;UBERON:0004786!2.80e-10!13;UBERON:0004921!1.26e-09!126;UBERON:0004185!1.26e-09!126;UBERON:0002108!1.75e-09!16;UBERON:0000464!4.74e-08!57;UBERON:0003350!8.58e-08!9;UBERON:0004808!8.58e-08!9;UBERON:0001277!8.58e-08!9;UBERON:0001045!9.61e-08!13;UBERON:0000485!3.22e-07!11;UBERON:0001264!4.75e-07!12;UBERON:0003922!4.75e-07!12;UBERON:0002114!4.75e-07!12;UBERON:0003923!4.75e-07!12;UBERON:0003924!4.75e-07!12;UBERON:0003921!4.75e-07!12 | |ontology_enrichment_uberon=UBERON:0000160!3.67e-25!43;UBERON:0005409!2.19e-23!59;UBERON:0000344!2.01e-11!15;UBERON:0001007!1.81e-10!128;UBERON:0001555!1.81e-10!128;UBERON:0007026!1.81e-10!128;UBERON:0004119!1.97e-10!130;UBERON:0000925!1.97e-10!130;UBERON:0006595!1.97e-10!130;UBERON:0001242!2.80e-10!13;UBERON:0000060!2.80e-10!13;UBERON:0001262!2.80e-10!13;UBERON:0004786!2.80e-10!13;UBERON:0004921!1.26e-09!126;UBERON:0004185!1.26e-09!126;UBERON:0002108!1.75e-09!16;UBERON:0000464!4.74e-08!57;UBERON:0003350!8.58e-08!9;UBERON:0004808!8.58e-08!9;UBERON:0001277!8.58e-08!9;UBERON:0001045!9.61e-08!13;UBERON:0000485!3.22e-07!11;UBERON:0001264!4.75e-07!12;UBERON:0003922!4.75e-07!12;UBERON:0002114!4.75e-07!12;UBERON:0003923!4.75e-07!12;UBERON:0003924!4.75e-07!12;UBERON:0003921!4.75e-07!12 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,9.29e-26,31;UBERON:0005409,5.81e-24,47;UBERON:0000344,8.94e-16,15;UBERON:0001242,3.97e-14,13;UBERON:0001262,3.97e-14,13;UBERON:0004786,3.97e-14,13;UBERON:0001007,3.32e-13,116;UBERON:0001555,3.32e-13,116;UBERON:0007026,3.32e-13,116;UBERON:0004119,1.16e-12,118;UBERON:0000925,1.16e-12,118;UBERON:0006595,1.16e-12,118;UBERON:0004921,4.96e-12,114;UBERON:0003350,1.51e-10,9;UBERON:0004808,1.51e-10,9;UBERON:0001277,1.51e-10,9;UBERON:0001264,1.76e-09,12;UBERON:0000485,4.95e-08,11;UBERON:0004923,1.12e-07,24 | |||
|phase1_expression=0.320297694209588,21.287499866001,18.654968814971,14.5182821427278,20.5367249278002,19.9776333575149,14.9512089981136,0,0,0,0,0,0,0,0,0,0,0,0,0,1.53077922271926,0,0,7.35965144849671,8.71755268055246,12.0588712464154,15.0766698655676,12.2818602630957,9.12112413390595,11.8454160987167,8.42575940490158,0,0,0,8.95440021228951,11.6364251750945,17.9669033510885,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0,0,0,0,0,0,0.514518872071894,0,0,0,0,0,0.677689064138264,0,0,0,0,0,0,0.725827286159344,0.540023753326763,0,0,0,0,0.0958454710182364,0.919218786610021,0,0.255374676170375,0.46081959976873,0.131886287730194,0.274462930807229,0.52091337055676,0,0,0.15279824777681,0,0.142371680799103,0,0,0,4.05810284182349,0,1.3599426674155,0,0,0,1.40444420131752,0,0,0,0.985903938436763,0,0,0,4.97929394325792,3.29367825117628,3.53867111510348,2.62622923353838,0,0.148442139064825,0,0,0.230615497256059,0,0.352766121407114,0.125666591329675,0.988779870937496,0,0,0,0,0,16.775258509631,0,0,13.0283098156382,0,0,0,0,0,0.251308704225729,0.173824320192276,0.255715457330331,0.41557608911912,0.324482526135515,1.42575109390443,0.497627882440372,2.52722758433675,1.47309299120532,0.260240885925407,0,0.360124259610698,0,0.272145996605311,0.12811372028485,0.0937017245597288,0.258703370739016,0.646703978798527,0,0.351902248327898,0,0,0.696504333044333,0.205782136407943,0.796137067273973,0,0,0,0,0,0,0,0.393528463494808,0,0,0.268273401399619,0.116765342367169,0,0.820837320395476,0.486412857275134,0.877199924551994,0.219550115291051,0.671032093801859,0.210289948564127,1.02904612379284,12.2254949704005,8.46241813323342,0.426576501070468,1.16118335930219,3.47942145569652,3.02525286935014,4.44756087689741,3.04361001780095,10.4396393539793,4.44687177754829,4.02136334080431,5.96869416123452,3.31438948102504,11.6846523125049,7.99710784536369,10.7536287557358,0.379335801906163,1.48523066392647,0,0.610953983535943,0.969762435838129,1.8936671370386,1.89709611372772,1.03327103585722,1.09899109488962,0.740382983530803,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0.252578877947112,0,0,2.03228509183265,0.568474235311454,1.14075483509418,0.848725428875941,0.469380496577004,1.50755631697634,1.19021820443007,4.48807390072937,0.945810864637146,0.8858587585951,1.2756381492599,1.80249646187312,1.55416483679306,3.61622646453779,0,0,1.47529281905711,1.65562047782839,0,0,0,0.252470927204373,0,0.390438744296638,0.215423397732799,0,0,0,0,0,0,0,0.851640511249612,1.06839362200353,0.488660878060728,1.48473110675282,3.98235415019888,1.69946445308487,3.62788268357701,4.14931175462976,4.72483028609236,6.14870295887855,5.16856586336442,3.99887102425256,4.63446591900138,3.47640433729398,8.4334886859999,4.12542172992747,0.680879211507576,0.18006109403131,0.517434735131018,0.428674070063185,0.886701168211368,0,0.493647061806363,0.608929898229199,0.469343416127421,0.21183207086382,2.42581237860458,2.80306630000516,1.13025098687134,2.5934557719107,4.17803204010978,4.76008609260678,10.4933101186746,0,0,0.619160603889667,0,0,0,0,0,0,0,1.90934123603023,0.474503990371703,1.82987520414164,2.37611749807963,1.25452977608681,3.71216358368502,2.56242258131159,2.89287095038676,2.09404753587224,10.8876577565106,8.69875038321696,0,0.448549638131936,0.165458490457098,0.972255941720238,0.387479470433193,0.337912250981556,0.469428954583016,0.39061315453185,0,0,0.288030006257865,0,0.405450430580328,0.205421914329655,0,0.358053391334963,0,0,0,0,0,0,0,0.0962118416403295,0,1.36038230169127,0.443971906748129,1.43542170575161,0.671538465456314,1.73870634628971,3.75364950902364,3.29672923681077,3.21552568618599,9.5298699766719,1.6942555278512,0.920650473014354,1.14579102687879,1.71853182343688,0,1.5107877947794,0.675022500231806,0.900642406448441,0,1.03552062350364,0.207574695168353,0,0,0,0,0.367687016900028,0.44449345560323,0.824140228955577,0.320919209591815,1.01078884705519,0.25347929989024,0.377252682772152,0.842773567228942,1.02440243847791,0.631790158511746,1.42888107384922,0.231768651889711,1.15745532278223,1.23625770240992,0.147198920134397,0,1.06485483695602,0.715308569841963,0.726732083161643,0.470546902076653,1.01537529470012,0.548783918618318,0.263069711437843,0.407412341537585,0.561142271657738,0.711810108745045,0.689531376628944,0,1.08455788830176,0.578719832943424,0.249810577937946,0.701794825336225,0.859484216193193,0.57386499620653,0.220591419119515,0 | |phase1_expression=0.320297694209588,21.287499866001,18.654968814971,14.5182821427278,20.5367249278002,19.9776333575149,14.9512089981136,0,0,0,0,0,0,0,0,0,0,0,0,0,1.53077922271926,0,0,7.35965144849671,8.71755268055246,12.0588712464154,15.0766698655676,12.2818602630957,9.12112413390595,11.8454160987167,8.42575940490158,0,0,0,8.95440021228951,11.6364251750945,17.9669033510885,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0,0,0,0,0,0,0.514518872071894,0,0,0,0,0,0.677689064138264,0,0,0,0,0,0,0.725827286159344,0.540023753326763,0,0,0,0,0.0958454710182364,0.919218786610021,0,0.255374676170375,0.46081959976873,0.131886287730194,0.274462930807229,0.52091337055676,0,0,0.15279824777681,0,0.142371680799103,0,0,0,4.05810284182349,0,1.3599426674155,0,0,0,1.40444420131752,0,0,0,0.985903938436763,0,0,0,4.97929394325792,3.29367825117628,3.53867111510348,2.62622923353838,0,0.148442139064825,0,0,0.230615497256059,0,0.352766121407114,0.125666591329675,0.988779870937496,0,0,0,0,0,16.775258509631,0,0,13.0283098156382,0,0,0,0,0,0.251308704225729,0.173824320192276,0.255715457330331,0.41557608911912,0.324482526135515,1.42575109390443,0.497627882440372,2.52722758433675,1.47309299120532,0.260240885925407,0,0.360124259610698,0,0.272145996605311,0.12811372028485,0.0937017245597288,0.258703370739016,0.646703978798527,0,0.351902248327898,0,0,0.696504333044333,0.205782136407943,0.796137067273973,0,0,0,0,0,0,0,0.393528463494808,0,0,0.268273401399619,0.116765342367169,0,0.820837320395476,0.486412857275134,0.877199924551994,0.219550115291051,0.671032093801859,0.210289948564127,1.02904612379284,12.2254949704005,8.46241813323342,0.426576501070468,1.16118335930219,3.47942145569652,3.02525286935014,4.44756087689741,3.04361001780095,10.4396393539793,4.44687177754829,4.02136334080431,5.96869416123452,3.31438948102504,11.6846523125049,7.99710784536369,10.7536287557358,0.379335801906163,1.48523066392647,0,0.610953983535943,0.969762435838129,1.8936671370386,1.89709611372772,1.03327103585722,1.09899109488962,0.740382983530803,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0.252578877947112,0,0,2.03228509183265,0.568474235311454,1.14075483509418,0.848725428875941,0.469380496577004,1.50755631697634,1.19021820443007,4.48807390072937,0.945810864637146,0.8858587585951,1.2756381492599,1.80249646187312,1.55416483679306,3.61622646453779,0,0,1.47529281905711,1.65562047782839,0,0,0,0.252470927204373,0,0.390438744296638,0.215423397732799,0,0,0,0,0,0,0,0.851640511249612,1.06839362200353,0.488660878060728,1.48473110675282,3.98235415019888,1.69946445308487,3.62788268357701,4.14931175462976,4.72483028609236,6.14870295887855,5.16856586336442,3.99887102425256,4.63446591900138,3.47640433729398,8.4334886859999,4.12542172992747,0.680879211507576,0.18006109403131,0.517434735131018,0.428674070063185,0.886701168211368,0,0.493647061806363,0.608929898229199,0.469343416127421,0.21183207086382,2.42581237860458,2.80306630000516,1.13025098687134,2.5934557719107,4.17803204010978,4.76008609260678,10.4933101186746,0,0,0.619160603889667,0,0,0,0,0,0,0,1.90934123603023,0.474503990371703,1.82987520414164,2.37611749807963,1.25452977608681,3.71216358368502,2.56242258131159,2.89287095038676,2.09404753587224,10.8876577565106,8.69875038321696,0,0.448549638131936,0.165458490457098,0.972255941720238,0.387479470433193,0.337912250981556,0.469428954583016,0.39061315453185,0,0,0.288030006257865,0,0.405450430580328,0.205421914329655,0,0.358053391334963,0,0,0,0,0,0,0,0.0962118416403295,0,1.36038230169127,0.443971906748129,1.43542170575161,0.671538465456314,1.73870634628971,3.75364950902364,3.29672923681077,3.21552568618599,9.5298699766719,1.6942555278512,0.920650473014354,1.14579102687879,1.71853182343688,0,1.5107877947794,0.675022500231806,0.900642406448441,0,1.03552062350364,0.207574695168353,0,0,0,0,0.367687016900028,0.44449345560323,0.824140228955577,0.320919209591815,1.01078884705519,0.25347929989024,0.377252682772152,0.842773567228942,1.02440243847791,0.631790158511746,1.42888107384922,0.231768651889711,1.15745532278223,1.23625770240992,0.147198920134397,0,1.06485483695602,0.715308569841963,0.726732083161643,0.470546902076653,1.01537529470012,0.548783918618318,0.263069711437843,0.407412341537585,0.561142271657738,0.711810108745045,0.689531376628944,0,1.08455788830176,0.578719832943424,0.249810577937946,0.701794825336225,0.859484216193193,0.57386499620653,0.220591419119515,0 | ||
|short_description=p2@Usp43 | |short_description=p2@Usp43 | ||
}} | }} |
Latest revision as of 23:07, 1 October 2015
Short description: | p2@Usp43 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Usp43_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENSMUST00000021288, ENSMUST00000108677, NM_173754, uc007jne.1, uc011xwq.1_5end |
EntrezGene: | Usp43 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 1.51e-10 | 9 |
epithelial cell of alimentary canal | 1.51e-10 | 9 |
endo-epithelial cell | 5.54e-09 | 15 |
epithelial cell | 6.48e-09 | 25 |
brush border epithelial cell | 9.23e-08 | 6 |
gut absorptive cell | 9.23e-08 | 6 |
enterocyte | 9.23e-08 | 6 |
endodermal cell | 1.04e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
intestine | 9.29e-26 | 31 |
gastrointestinal system | 5.81e-24 | 47 |
mucosa | 8.94e-16 | 15 |
intestinal mucosa | 3.97e-14 | 13 |
wall of intestine | 3.97e-14 | 13 |
gastrointestinal system mucosa | 3.97e-14 | 13 |
digestive system | 3.32e-13 | 116 |
digestive tract | 3.32e-13 | 116 |
primitive gut | 3.32e-13 | 116 |
endoderm-derived structure | 1.16e-12 | 118 |
endoderm | 1.16e-12 | 118 |
presumptive endoderm | 1.16e-12 | 118 |
subdivision of digestive tract | 4.96e-12 | 114 |
epithelium of mucosa | 1.51e-10 | 9 |
gastrointestinal system epithelium | 1.51e-10 | 9 |
intestinal epithelium | 1.51e-10 | 9 |
pancreas | 1.76e-09 | 12 |
simple columnar epithelium | 4.95e-08 | 11 |
organ component layer | 1.12e-07 | 24 |