FFCP PHASE1:Mm9::chr4:45839724..45839735,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=75426 | |EntrezGene=75426 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1065 | |||
|TSSclassifier=NA | |||
|UniProt=Q80W15 | |UniProt=Q80W15 | ||
|association_with_transcript=-25bp_to_NM_018741,uc008ssy.1_5end | |association_with_transcript=-25bp_to_NM_018741,uc008ssy.1_5end | ||
|cluster_id=chr4:45839724..45839735,- | |||
|description=CAGE_peak_3_at_Igfbpl1_5end | |description=CAGE_peak_3_at_Igfbpl1_5end | ||
|id=chr4:45839724..45839735,- | |id=chr4:45839724..45839735,- | ||
|ontology_enrichment_celltype=CL:0000221!8.11e-13!44;CL:0000133!8.11e-13!44;CL:0002319!1.33e-12!43;CL:0000540!1.26e-09!33;CL:0000047!1.26e-09!33;CL:0000031!1.26e-09!33;CL:0000404!1.26e-09!33;CL:0000055!4.18e-09!50;CL:0000117!1.14e-08!23;CL:0000337!1.14e-08!23;CL:0002609!7.81e-07!6;CL:0000393!9.08e-07!39;CL:0000211!9.08e-07!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,3.08e-13,43;CL:0000221,9.37e-13,44;CL:0000133,9.37e-13,44;CL:0000117,1.09e-10,23;CL:0000337,1.09e-10,23;CL:0002609,1.98e-09,6;CL:0000540,1.56e-08,33;CL:0000047,1.56e-08,33;CL:0000031,1.56e-08,33;CL:0000404,1.56e-08,33;CL:0002453,3.43e-08,8 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.50e-09!73;UBERON:0005743!2.50e-09!73;UBERON:0000073!1.10e-08!75;UBERON:0001016!1.10e-08!75;UBERON:0004121!3.50e-07!102;UBERON:0000924!3.50e-07!102;UBERON:0006601!3.50e-07!102 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,9.53e-09,73;UBERON:0001016,2.79e-08,75;UBERON:0001954,1.28e-07,7;UBERON:0003022,1.28e-07,7;UBERON:0002421,1.28e-07,7;UBERON:0000349,1.28e-07,7;UBERON:0002600,1.28e-07,7;UBERON:0010314,4.54e-07,92;UBERON:0002020,6.78e-07,34 | |||
|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166234645358492,0.204169356262369,0,0,0,0,0,0,0,0,0,0,16.3518867285335,20.2111288115714,18.6652703111312,2.37976916763116,23.0004102983955,0,0,0,0,0,0,16.589949790487,19.5726662330652,25.3532561402472,1.69422266034566,0,0,0,0,8.98800331555214,25.3584081512226,29.6552291202246,41.041805252834,47.1127913427096,0.856952953211411,0.220868540951614,29.397791811589,22.5236856892855,43.203282970671,0,0,0.153606533256243,19.2553980086083,18.8464545820964,17.1901412283731,0,0,0,1.76777151284201,1.56608848879013,12.4887628702951,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0.422530259330042,0,0,0,0.216491041011214,0.253359865475099,0,0,0,0,0.520455980298408,0,0,0.452167921657868,0.23517741427141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.599162557619291,0,25.3821791267986,0,0.511430914660661,1.0389402227978,0.324482526135515,0.101839363850316,0,0,0,0.650602214813519,3.90833577536904,1.98068342785884,1.20563854268572,0.272145996605311,0.2562274405697,0.562210347358373,0,0.215567992932842,0.189106080167819,0,0,0,0,0,0.796137067273973,0,0,0,3.72826390563903,3.04883877975425,2.34080679899319,1.42046841351126,1.37734962223183,1.85120535464854,2.09280550275367,1.87791380979733,1.5179494507732,2.30383789878873,1.14917224855367,0.891756905004413,0.584799949701329,0.878200461164203,0.402619256281115,0.420579897128254,29.7394329776132,0,0,0.213288250535234,0,0,0,0.22237804384487,0,0,0,0,0.198956472041151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.947457058852424,0,0,0,0,0,0,0.157635144106191,0,0,0,0,0,0,0,0,0,0,0.234423373184406,0,0,0.315508219416257,0.780877488593277,1.07711698866399,0,1.11399337041197,0.283076530788832,0,1.16902343164525,0.790575555893047,1.28528526568723,0,0,0,0,0,0.485561272309963,0.604647113929502,0,0.295301892880773,0,0,0,0,0,0,0,0,1.26042765821917,1.29358683782755,0,0,0.178368817602071,0.164549020602121,0,0.938686832254841,0,0,0,0,0,0,0,0,0,0,0.412773735926445,0.185194527369712,0,0,0,0,0,0,0,0.158167996790568,0.609958401380546,0,0.209088296014469,0,0,0,0,0,0,0,0.897099276263873,1.32366792365678,0.972255941720238,1.54991788173277,1.01373675294467,0.117357238645754,0.2604087696879,0.943734099831398,0,0,0,0.202725215290164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.572895513439397,0,0,0,0,0,0,0,0.415149390336707,5.1873233542134,4.09760653809922,1.21553358534147,2.09613162627982,0.551530525350042,1.55572709461131,1.44224540067226,2.88827288632634,1.76888048234658,2.28131369901216,2.64076877940507,1.77918864192777,1.28050304809739,1.09127391015665,0.476293691283074,2.0859178670074,0.77163688185482,1.64834360321323,2.35518272215036,2.74295401908332,1.95223386775271,2.62279808942053,2.76158191601424,1.50575008664529,1.86152137361688,2.0122077016005,2.10455769150274,1.22223702461276,1.68342681497322,2.25406534435931,2.36410757701352,1.22769312950907,2.01417893541756,1.35034627686799,4.99621155875892,0.467863216890817,0.644613162144895,0.191288332068843,0,0 | |phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166234645358492,0.204169356262369,0,0,0,0,0,0,0,0,0,0,16.3518867285335,20.2111288115714,18.6652703111312,2.37976916763116,23.0004102983955,0,0,0,0,0,0,16.589949790487,19.5726662330652,25.3532561402472,1.69422266034566,0,0,0,0,8.98800331555214,25.3584081512226,29.6552291202246,41.041805252834,47.1127913427096,0.856952953211411,0.220868540951614,29.397791811589,22.5236856892855,43.203282970671,0,0,0.153606533256243,19.2553980086083,18.8464545820964,17.1901412283731,0,0,0,1.76777151284201,1.56608848879013,12.4887628702951,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0.422530259330042,0,0,0,0.216491041011214,0.253359865475099,0,0,0,0,0.520455980298408,0,0,0.452167921657868,0.23517741427141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.599162557619291,0,25.3821791267986,0,0.511430914660661,1.0389402227978,0.324482526135515,0.101839363850316,0,0,0,0.650602214813519,3.90833577536904,1.98068342785884,1.20563854268572,0.272145996605311,0.2562274405697,0.562210347358373,0,0.215567992932842,0.189106080167819,0,0,0,0,0,0.796137067273973,0,0,0,3.72826390563903,3.04883877975425,2.34080679899319,1.42046841351126,1.37734962223183,1.85120535464854,2.09280550275367,1.87791380979733,1.5179494507732,2.30383789878873,1.14917224855367,0.891756905004413,0.584799949701329,0.878200461164203,0.402619256281115,0.420579897128254,29.7394329776132,0,0,0.213288250535234,0,0,0,0.22237804384487,0,0,0,0,0.198956472041151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.947457058852424,0,0,0,0,0,0,0.157635144106191,0,0,0,0,0,0,0,0,0,0,0.234423373184406,0,0,0.315508219416257,0.780877488593277,1.07711698866399,0,1.11399337041197,0.283076530788832,0,1.16902343164525,0.790575555893047,1.28528526568723,0,0,0,0,0,0.485561272309963,0.604647113929502,0,0.295301892880773,0,0,0,0,0,0,0,0,1.26042765821917,1.29358683782755,0,0,0.178368817602071,0.164549020602121,0,0.938686832254841,0,0,0,0,0,0,0,0,0,0,0.412773735926445,0.185194527369712,0,0,0,0,0,0,0,0.158167996790568,0.609958401380546,0,0.209088296014469,0,0,0,0,0,0,0,0.897099276263873,1.32366792365678,0.972255941720238,1.54991788173277,1.01373675294467,0.117357238645754,0.2604087696879,0.943734099831398,0,0,0,0.202725215290164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.572895513439397,0,0,0,0,0,0,0,0.415149390336707,5.1873233542134,4.09760653809922,1.21553358534147,2.09613162627982,0.551530525350042,1.55572709461131,1.44224540067226,2.88827288632634,1.76888048234658,2.28131369901216,2.64076877940507,1.77918864192777,1.28050304809739,1.09127391015665,0.476293691283074,2.0859178670074,0.77163688185482,1.64834360321323,2.35518272215036,2.74295401908332,1.95223386775271,2.62279808942053,2.76158191601424,1.50575008664529,1.86152137361688,2.0122077016005,2.10455769150274,1.22223702461276,1.68342681497322,2.25406534435931,2.36410757701352,1.22769312950907,2.01417893541756,1.35034627686799,4.99621155875892,0.467863216890817,0.644613162144895,0.191288332068843,0,0 | ||
|short_description=p3@Igfbpl1 | |short_description=p3@Igfbpl1 | ||
}} | }} |
Latest revision as of 01:01, 27 September 2015
Short description: | p3@Igfbpl1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Igfbpl1_5end |
Coexpression cluster: | MCL_coexpression_mm9:1065 |
Association with transcript: | -25bp_to_NM_018741, uc008ssy.1_5end |
EntrezGene: | Igfbpl1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 3.08e-13 | 43 |
ectodermal cell | 9.37e-13 | 44 |
neurectodermal cell | 9.37e-13 | 44 |
CNS neuron (sensu Vertebrata) | 1.09e-10 | 23 |
neuroblast (sensu Vertebrata) | 1.09e-10 | 23 |
neuron of cerebral cortex | 1.98e-09 | 6 |
neuron | 1.56e-08 | 33 |
neuronal stem cell | 1.56e-08 | 33 |
neuroblast | 1.56e-08 | 33 |
electrically signaling cell | 1.56e-08 | 33 |
oligodendrocyte precursor cell | 3.43e-08 | 8 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 9.53e-09 | 73 |
nervous system | 2.79e-08 | 75 |
Ammon's horn | 1.28e-07 | 7 |
lobe parts of cerebral cortex | 1.28e-07 | 7 |
hippocampal formation | 1.28e-07 | 7 |
limbic system | 1.28e-07 | 7 |
limbic lobe | 1.28e-07 | 7 |
structure with developmental contribution from neural crest | 4.54e-07 | 92 |
gray matter | 6.78e-07 | 34 |