FFCP PHASE1:Mm9::chr2:151566972..151567045,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=228769 | |EntrezGene=228769 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=15 | |||
|TSSclassifier=NA | |||
|UniProt=Q8BHL8,D6REH2,A2AU35,A2VCP7 | |UniProt=Q8BHL8,D6REH2,A2AU35,A2VCP7 | ||
|association_with_transcript=0bp_to_ENSMUST00000042452,ENSMUST00000123449,ENSMUST00000155939,NM_212446,uc008nek.1,uc008nel.1,uc008nem.1_5end | |association_with_transcript=0bp_to_ENSMUST00000042452,ENSMUST00000123449,ENSMUST00000155939,NM_212446,uc008nek.1,uc008nel.1,uc008nem.1_5end | ||
|cluster_id=chr2:151566972..151567045,- | |||
|description=CAGE_peak_1_at_Psmf1_5end | |description=CAGE_peak_1_at_Psmf1_5end | ||
|id=chr2:151566972..151567045,- | |id=chr2:151566972..151567045,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005172!7.69e-11!49;UBERON:0005173!7.69e-11!49;UBERON:0002417!7.69e-11!49;UBERON:0000916!7.69e-11!49;UBERON:0002107!8.49e-11!22;UBERON:0007499!8.49e-11!22;UBERON:0006925!8.49e-11!22;UBERON:0009497!8.49e-11!22;UBERON:0000015!8.49e-11!22;UBERON:0002423!8.49e-11!22;UBERON:0006235!8.49e-11!22;UBERON:0008835!8.49e-11!22;UBERON:0003894!8.49e-11!22;UBERON:0004161!8.49e-11!22;UBERON:0008836!8.49e-11!22;UBERON:0002365!1.05e-09!25;UBERON:0002330!1.05e-09!25;UBERON:0009854!1.73e-09!23;UBERON:0009856!1.73e-09!23;UBERON:0005177!1.97e-08!85;UBERON:0000466!8.19e-08!79;UBERON:0005057!1.65e-07!51;UBERON:0009569!2.14e-07!66;UBERON:0002405!2.31e-07!70;UBERON:0000475!5.36e-07!200;UBERON:0002100!5.94e-07!98 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005172,7.69e-11,49;UBERON:0005173,7.69e-11,49;UBERON:0002417,7.69e-11,49;UBERON:0000916,7.69e-11,49;UBERON:0002107,8.49e-11,22;UBERON:0007499,8.49e-11,22;UBERON:0006925,8.49e-11,22;UBERON:0009497,8.49e-11,22;UBERON:0000015,8.49e-11,22;UBERON:0002423,8.49e-11,22;UBERON:0006235,8.49e-11,22;UBERON:0008835,8.49e-11,22;UBERON:0003894,8.49e-11,22;UBERON:0004161,8.49e-11,22;UBERON:0008836,8.49e-11,22;UBERON:0002365,1.05e-09,25;UBERON:0002330,1.05e-09,25;UBERON:0009854,1.73e-09,23;UBERON:0009856,1.73e-09,23;UBERON:0005177,1.43e-07,79;UBERON:0009569,2.14e-07,66;UBERON:0003104,2.64e-07,61;UBERON:0009142,2.64e-07,61 | |||
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| |phase1_expression=34.1117044333211,28.2670080187882,24.1149596876454,20.8700305801713,15.0268718983904,20.8170297170743,21.7259755753839,40.2864769137718,18.0209564354133,15.6823232635736,39.2089147236406,39.4872187026915,32.0145364971355,37.3285118329119,81.945001406653,116.01832821437,143.41018501627,30.1266367917117,30.7136331276855,33.9511721438424,37.1639177960175,32.3688500914886,24.5527801790599,30.3985603307473,35.5584385654114,33.8796858827862,34.460959692726,39.6467068142036,40.2849649247513,39.0646701127893,34.3682291515722,45.0871778156338,45.5147942812582,31.6963362030877,25.9966457776147,32.2495211995475,24.908661464009,29.7157457823205,17.9707129240474,28.7938059185589,18.2351761289614,22.5405010036287,27.1885797697446,34.3698313073326,29.0951792600007,37.443537440983,30.5132624295735,28.1252451730776,40.6419438058773,28.7756250629939,22.1178546168073,31.6255641602937,22.4828692117367,23.211588544363,24.5348473373999,25.4686841675588,22.9226751951005,26.814948798427,41.4748744762175,43.3772603003067,32.3254015788151,33.2067641427749,33.7932022522233,31.496490104849,32.6325899647102,22.7353636782752,29.0612107202853,49.9483796918021,25.611334240194,34.2915083362494,26.2906201689228,39.7054868321287,35.3389665522582,26.70299422886,24.8239769937232,29.4150011715207,24.2254938198655,28.2189017168265,30.1068805182237,36.9281605644543,36.1376192229518,27.6084086395083,36.8521558681823,33.7657566019008,30.1012548120316,35.0608016713665,30.8946547334053,31.1287074528252,29.0031320466095,28.8683359607921,21.4499721639242,35.2773789562368,39.4383373550495,50.7321000139548,47.4336784736798,41.6665005000522,48.1724361051909,37.8355316123288,34.2917526075787,26.5004680882755,33.2390470672966,21.815501160434,15.2883143823987,7.11066703153331,29.4427815775251,29.8964641260616,24.7706978057244,39.0508868639185,51.26970096214,37.5558611834007,28.6250789164124,28.6197549613413,30.6718611350558,29.3909149077614,34.5710798978972,34.9353123896498,25.9554716121093,31.6672591654607,81.3841707793884,33.4857379391137,58.9646854289251,61.094281895038,20.5030937339934,42.4532155666743,39.1665341741161,43.4276993854605,30.3132264999978,18.5969846607956,29.6073629080241,44.0384479850179,27.9075367719362,32.5444771972319,35.2863369990321,33.243009452943,36.362907797923,28.8789448260609,31.7738815212987,48.0210906554959,30.5794537704746,31.3558365270846,28.6264974517948,29.4274693674845,34.7519910524324,32.8536502881859,36.1954175485064,40.6120493302974,33.2641122187037,33.114031454594,41.6046226360385,31.2025032276902,31.4952512253468,25.4267049615987,27.5266776733342,28.5566776548177,21.812906459242,23.8841120182192,29.4929538671559,25.4774428043568,35.2362739250535,24.8550927042602,26.5014447778639,20.5270750065557,25.8051761787879,26.7599355176469,20.6717931269087,23.4859284197912,21.7301455133692,28.0236821681207,25.1776570367625,36.6093444896382,32.6707302469799,27.6317976233878,27.2242142960903,30.4648570586044,28.5994330047213,39.1037527041281,43.6152793538613,35.1719253662514,33.9128318351022,24.6170872172065,27.9642391068943,28.0340099226446,32.0224383136613,36.5233202136114,33.6915633696603,43.4805240471389,31.4169011000337,40.7860767684359,39.9676378594196,43.1433316154026,33.933673830327,42.6162324764346,34.1402221715547,28.5621281524322,33.8123207019241,28.7148372261893,21.7226785627741,28.8959577948112,33.7050742872291,37.4929775868189,42.7036539728539,38.6233123075236,49.804041350641,50.2203768205443,55.6261956170365,72.180738075538,70.189602000422,69.4590220086961,67.2212248702948,62.7177579642767,85.2831292836686,90.0561435256907,40.2550978276593,75.1724714290377,67.0880997196305,57.3354052939944,69.42679903298,58.3756660849674,38.9829231251536,25.2023577654745,27.7040459951444,23.424821836976,21.5915028425422,26.4659886758069,32.3739351604979,29.4651808265276,28.6895962273268,36.5416737920479,32.5287728061274,29.6592599635486,33.3282015001178,32.5460381808401,22.6186925908908,14.6854534631052,24.0964493779328,31.7327258250442,52.1789417460324,37.6249513960972,20.9836730082145,36.6082844446341,25.5561657727168,24.9880796349849,24.5582673415391,22.4630670075399,26.2902435417225,19.8153571552183,22.6693992937941,23.380468632905,25.2984177885775,32.1321316421807,28.8138372972785,32.764071074775,42.3506094319298,32.9940245945071,30.5313818181915,32.2898246086125,31.7439734812989,32.6286787977704,36.322132824335,27.6691633149535,35.6631044572145,30.900367005588,40.997198514243,38.2404477102337,26.3546521437497,33.0033738394198,35.0652793926402,27.3692862927592,31.8222362105576,26.1491182738543,28.7291178500483,28.0039043635251,26.9860393787478,42.0161629778147,36.3741147498751,26.4790088579775,37.0487708732336,18.3023740765043,27.4489525383039,27.3217549924546,28.2912455287433,24.9494167612493,32.3543728659134,44.6874977845328,100.813819670733,28.8941615148511,42.7799358224034,158.22950388394,162.939519443462,108.898410446305,41.9846722084823,43.6648531249813,43.8093916960023,35.3228128665592,31.475431361323,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| ||
|short_description=p1@Psmf1 | |short_description=p1@Psmf1 | ||
}} | }} |
Latest revision as of 21:42, 25 September 2015
Short description: | p1@Psmf1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Psmf1_5end |
Coexpression cluster: | MCL_coexpression_mm9:15 |
Association with transcript: | 0bp_to_ENSMUST00000042452, ENSMUST00000123449, ENSMUST00000155939, NM_212446, uc008nek.1, uc008nel.1, uc008nem.1_5end |
EntrezGene: | Psmf1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
abdomen element | 7.69e-11 | 49 |
abdominal segment element | 7.69e-11 | 49 |
abdominal segment of trunk | 7.69e-11 | 49 |
abdomen | 7.69e-11 | 49 |
liver | 8.49e-11 | 22 |
epithelial sac | 8.49e-11 | 22 |
digestive gland | 8.49e-11 | 22 |
epithelium of foregut-midgut junction | 8.49e-11 | 22 |
anatomical boundary | 8.49e-11 | 22 |
hepatobiliary system | 8.49e-11 | 22 |
foregut-midgut junction | 8.49e-11 | 22 |
hepatic diverticulum | 8.49e-11 | 22 |
liver primordium | 8.49e-11 | 22 |
septum transversum | 8.49e-11 | 22 |
liver bud | 8.49e-11 | 22 |
exocrine gland | 1.05e-09 | 25 |
exocrine system | 1.05e-09 | 25 |
digestive tract diverticulum | 1.73e-09 | 23 |
sac | 1.73e-09 | 23 |
trunk region element | 1.43e-07 | 79 |
subdivision of trunk | 2.14e-07 | 66 |
mesenchyme | 2.64e-07 | 61 |
entire embryonic mesenchyme | 2.64e-07 | 61 |