FFCP PHASE1:Mm9::chr12:21502374..21502380,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(3 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=58 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:21502374..21502380,+ | |||
|description=CAGE_peak_at_chr12:21502374..21502380,+ | |description=CAGE_peak_at_chr12:21502374..21502380,+ | ||
|id=chr12:21502374..21502380,+ | |id=chr12:21502374..21502380,+ | ||
|ontology_enrichment_celltype=CL:0000473!3.71e-25!3;CL:0000627!3.71e-25!3;CL:0000682!3.71e-25!3;CL:0000239!2.78e-21!6;CL:0000677!2.78e-21!6;CL:0000212!2.78e-21!6;CL:0000584!2.78e-21!6;CL:0000075!2.64e-18!7;CL:0000066!2.35e-15!25;CL:0002563!2.51e-14!9;CL:0002251!2.51e-14!9;CL:0002076!1.00e-08!15 | |ontology_enrichment_celltype=CL:0000473!3.71e-25!3;CL:0000627!3.71e-25!3;CL:0000682!3.71e-25!3;CL:0000239!2.78e-21!6;CL:0000677!2.78e-21!6;CL:0000212!2.78e-21!6;CL:0000584!2.78e-21!6;CL:0000075!2.64e-18!7;CL:0000066!2.35e-15!25;CL:0002563!2.51e-14!9;CL:0002251!2.51e-14!9;CL:0002076!1.00e-08!15 | ||
|ontology_enrichment_celltype_v019_2=CL:0000682,3.62e-30,3;CL:0000239,4.88e-15,6;CL:0000677,4.88e-15,6;CL:0000584,4.88e-15,6;CL:0000066,5.21e-14,25;CL:0000473,2.31e-13,7;CL:0000075,5.45e-13,7;CL:0002563,2.99e-10,9;CL:0002251,2.99e-10,9 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!1.21e-25!15;UBERON:0001962!2.72e-17!2;UBERON:0001961!2.72e-17!2;UBERON:0001744!2.72e-17!2;UBERON:0004923!6.14e-16!24;UBERON:0001242!2.93e-15!13;UBERON:0000060!2.93e-15!13;UBERON:0001262!2.93e-15!13;UBERON:0004786!2.93e-15!13;UBERON:0003350!2.51e-14!9;UBERON:0004808!2.51e-14!9;UBERON:0001277!2.51e-14!9;UBERON:0002465!7.41e-12!3;UBERON:0000485!8.72e-12!11;UBERON:0003199!2.09e-09!1 | |ontology_enrichment_uberon=UBERON:0000344!1.21e-25!15;UBERON:0001962!2.72e-17!2;UBERON:0001961!2.72e-17!2;UBERON:0001744!2.72e-17!2;UBERON:0004923!6.14e-16!24;UBERON:0001242!2.93e-15!13;UBERON:0000060!2.93e-15!13;UBERON:0001262!2.93e-15!13;UBERON:0004786!2.93e-15!13;UBERON:0003350!2.51e-14!9;UBERON:0004808!2.51e-14!9;UBERON:0001277!2.51e-14!9;UBERON:0002465!7.41e-12!3;UBERON:0000485!8.72e-12!11;UBERON:0003199!2.09e-09!1 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,3.51e-23,15;UBERON:0001962,1.27e-20,2;UBERON:0001961,1.27e-20,2;UBERON:0001744,1.27e-20,2;UBERON:0004923,1.61e-14,24;UBERON:0002465,4.25e-14,3;UBERON:0001242,3.22e-12,13;UBERON:0001262,3.22e-12,13;UBERON:0004786,3.22e-12,13;UBERON:0003199,4.58e-11,1;UBERON:0003350,2.99e-10,9;UBERON:0004808,2.99e-10,9;UBERON:0001277,2.99e-10,9;UBERON:0000485,1.69e-08,11 | |||
|phase1_expression=0,0.348975407639361,1.36499771816861,0,0,1.00727563147134,2.33612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.55987876469451,1.83527424853736,3.44539178469012,1.29228598847722,2.80112602491656,0,0,1.77384408524244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.453142408984205,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0.348975407639361,1.36499771816861,0,0,1.00727563147134,2.33612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.55987876469451,1.83527424853736,3.44539178469012,1.29228598847722,2.80112602491656,0,0,1.77384408524244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.453142408984205,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr12:21502374..21502380,+ | |short_description=p@chr12:21502374..21502380,+ | ||
}} | }} |
Latest revision as of 21:57, 4 August 2015
Short description: | p@chr12:21502374..21502380, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:21502374..21502380, + |
Coexpression cluster: | MCL_coexpression_mm9:58 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
M cell of gut | 3.62e-30 | 3 |
brush border epithelial cell | 4.88e-15 | 6 |
gut absorptive cell | 4.88e-15 | 6 |
enterocyte | 4.88e-15 | 6 |
epithelial cell | 5.21e-14 | 25 |
defensive cell | 2.31e-13 | 7 |
columnar/cuboidal epithelial cell | 5.45e-13 | 7 |
intestinal epithelial cell | 2.99e-10 | 9 |
epithelial cell of alimentary canal | 2.99e-10 | 9 |
Ontology term | p-value | n |
---|---|---|
mucosa | 3.51e-23 | 15 |
gut-associated lymphoid tissue | 1.27e-20 | 2 |
mucosa-associated lymphoid tissue | 1.27e-20 | 2 |
lymphoid tissue | 1.27e-20 | 2 |
organ component layer | 1.61e-14 | 24 |
lymphoid system | 4.25e-14 | 3 |
intestinal mucosa | 3.22e-12 | 13 |
wall of intestine | 3.22e-12 | 13 |
gastrointestinal system mucosa | 3.22e-12 | 13 |
egg chamber | 4.58e-11 | 1 |
epithelium of mucosa | 2.99e-10 | 9 |
gastrointestinal system epithelium | 2.99e-10 | 9 |
intestinal epithelium | 2.99e-10 | 9 |
simple columnar epithelium | 1.69e-08 | 11 |