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FFCP PHASE1:Mm9::chr14:28051234..28051249,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=71704
|EntrezGene=71704
|HGNC=
|HGNC=
|MCL_coexpression_id=2898
|TSSclassifier=NA
|UniProt=
|UniProt=
|association_with_transcript=0bp_to_uc007stq.1_5end
|association_with_transcript=0bp_to_uc007stq.1_5end
|cluster_id=chr14:28051234..28051249,+
|description=CAGE_peak_4_at_Arhgef3_5end
|description=CAGE_peak_4_at_Arhgef3_5end
|id=chr14:28051234..28051249,+
|id=chr14:28051234..28051249,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0005157!1.88e-08!27;UBERON:0000065!2.19e-08!41;UBERON:0001004!9.64e-08!42;UBERON:0000926!1.91e-07!193;UBERON:0004120!1.91e-07!193;UBERON:0006603!1.91e-07!193;UBERON:0002048!2.21e-07!14;UBERON:0000117!2.21e-07!14;UBERON:0000171!2.21e-07!14;UBERON:0000170!2.21e-07!14;UBERON:0005597!2.21e-07!14;UBERON:0000118!2.21e-07!14;UBERON:0005153!7.30e-07!17
|ontology_enrichment_uberon=UBERON:0005157!1.88e-08!27;UBERON:0000065!2.19e-08!41;UBERON:0001004!9.64e-08!42;UBERON:0000926!1.91e-07!193;UBERON:0004120!1.91e-07!193;UBERON:0006603!1.91e-07!193;UBERON:0002048!2.21e-07!14;UBERON:0000117!2.21e-07!14;UBERON:0000171!2.21e-07!14;UBERON:0000170!2.21e-07!14;UBERON:0005597!2.21e-07!14;UBERON:0000118!2.21e-07!14;UBERON:0005153!7.30e-07!17
|ontology_enrichment_uberon_v019_2=UBERON:0000065,8.38e-11,41;UBERON:0001004,3.24e-10,42;UBERON:0002048,3.24e-08,14;UBERON:0000117,3.24e-08,14;UBERON:0000171,3.24e-08,14;UBERON:0000170,3.24e-08,14;UBERON:0005597,3.24e-08,14;UBERON:0000118,3.24e-08,14;UBERON:0000077,3.60e-07,35;UBERON:0005153,6.78e-07,17
|phase1_expression=0.320297694209588,0,0,0,0,0,0,16.0112921067555,6.75785866328,12.8735489477096,2.05461561870606,1.11681022593471,19.174481752295,18.3582845079895,0.666219523631325,0.809901069559304,0,2.68142840554502,3.56497527374921,1.27316895539409,5.6128571499706,0,0,0.159992422793407,0,0,0,0,0.190023419456374,0.252030129759931,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.503347818173209,21.035502118329,15.4603147605533,0.257259436035947,0,0.515672092277442,0,0,0,0,0,0,0,0,0,0,0,0,0.210324961351382,0,0,0.122490799214954,0,0,0,0.255374676170375,0.307213066512487,0,0.182975287204819,0,1.3959149950069,0,0.15279824777681,0,0,0.372798891650601,0,0.0755715601067855,4.34796733052517,1.72084775396277,0,0,0,0,2.80888840263504,0,0,0,0,0,0,0,0,0,0,1.59857431606684,6.47344709117929,4.75014845007439,1.04091196059682,7.00270600117925,3.22861696158482,6.48107354376277,7.4080885495494,3.26733137457156,3.21353458054686,3.61498392299779,0.884610551949874,1.7794353494215,1.98757366614354,2.42437626567611,0,5.5628351432194,3.97948742945565,1.78819938646014,2.75574786363617,1.19980546198682,1.39777249780371,0.599162557619291,0.457500602818626,0,0.173824320192276,0,0.20778804455956,0.162241263067758,0.712875546952214,1.49288364732112,0.758168275301024,3.78795340595653,0.520481771850815,0.689706313300419,0.360124259610698,0.150704817835715,0.340182495756639,0.640568601424249,0.562210347358373,1.55222022443409,0.646703978798527,0.189106080167819,0.351902248327898,0.657587197282725,0.278047249225598,1.39300866608867,0.61734640922383,0.995171334092466,1.40442637462647,0,0,0.621377317606506,0.938104239924385,1.62055855314913,1.42046841351126,2.16440654922144,2.46827380619805,2.32533944750408,2.41446061259657,3.15266424391358,3.62031669809657,9.68588038066662,10.8632204791447,7.45619935869195,9.66020507280623,10.3338942445486,0.420579897128254,0.205809224758569,0.660837565967596,1.32225283331772,2.13288250535234,2.32236671860439,1.9330119198314,0.80673409849337,1.77902435075896,0.760902504450237,2.84717436926707,2.47048432086016,2.5133520880027,2.58643413653496,1.55971269695296,1.79763881730844,3.02593269824572,2.38969527905241,1.51734320762465,2.39921876480431,1.1270773567308,4.2766778847516,4.07300223052014,4.27828501330943,5.6280518040589,4.28069429140846,5.80895293013087,3.70191491765402,1.77871576252289,0.166845105716094,0.589676985339609,0,0,0.241177159752417,0.25462585178142,1.43848068725405,0.324270453550071,0,0,2.23284568601102,0.936113019343682,1.26289438973556,0.358794827043824,0,37.874403984154,0.189491411770485,1.62964976442026,1.35796068620151,4.92849521405854,6.03022526790537,15.2347930167049,15.0252908850505,17.8127712839996,21.9250042752287,20.4102103881583,44.5708216026807,27.1115421529456,29.0744607748838,0,0,0.491764273019036,3.31124095565679,0.481651769963376,0.117211686592203,0,4.54447668967871,0.315508219416257,1.56175497718655,0.215423397732799,0.238968797952552,0.891194696329576,0.283076530788832,0,1.46127928955656,0.790575555893047,0,0.567760340833074,0.35613120733451,1.62886959353576,1.15479086080775,2.65490276679926,0.242780636154981,0,0.943025398779491,1.47650946440386,1.53717573971964,0.775284879504663,2.90826983582004,1.78248689192361,2.21225730555071,0,2.06271086496374,0,0.18006109403131,0.646793418913773,0.214337035031592,0.886701168211368,0.356737635204141,1.15184314421485,0.304464949114599,3.28540391289194,5.50763384245932,0.661585194164886,1.48397627647332,1.77610869365496,1.14594557363496,1.3130957840345,0.984845398470368,1.45740418314925,0.556275906031529,2.05045056957423,1.44470807574256,1.29636169158798,1.50694765603753,1.36694227721025,1.60144721244566,10.8786195196067,9.23679585336143,7.73919853304773,1.90934123603023,1.10717597753397,0.609958401380546,1.18805874903981,0.418176592028937,1.09181281873089,1.34864346384821,0.909188012978695,1.57053565190418,1.16653475962614,0,0,0.747582730219894,0.330916980914195,0.583353565032143,0.129159823477731,0,0.234714477291508,0.2604087696879,0.104859344425711,0.241584120826006,0.576060012515731,1.58005560314089,1.82452693761148,1.84879722896689,3.37794139742267,1.43221356533985,2.98022032171897,3.12508168751919,1.9199638532695,1.61546319917036,2.13379058634,2.82313318383153,2.0466154955348,2.50150788264857,2.10378423926824,5.44152920676507,0.221985953374065,0.179427713218951,0.839423081820392,1.54551675225752,1.50145980360946,1.09890974560359,1.07184189539533,0.501572104035363,1.6942555278512,0.460325236507177,0,0.343706364687375,0,0,0,0,0,0,0.207574695168353,0,0.512200817262403,0.243106717068294,0.628839487883947,0.919217542250071,1.11123363900808,1.44224540067226,1.60459604795908,1.01078884705519,0.50695859978048,1.69763707247469,1.12369808963859,1.6646539625266,1.14870937911227,0.476293691283074,1.0429589335037,0.964546102318525,1.23625770240992,1.61918812147837,1.02860775715625,1.24233064311536,1.43061713968393,2.47088908274958,1.78807822789128,1.86152137361688,1.46342378298218,2.36762740294059,1.08643291076689,4.48913817326191,0.949080144993393,1.18205378850676,1.63692417267876,1.54936841185966,0.964533054905707,0.249810577937946,1.63752125911786,2.57845264857958,1.3390183244819,1.32354851471709,5.56482805489012
|phase1_expression=0.320297694209588,0,0,0,0,0,0,16.0112921067555,6.75785866328,12.8735489477096,2.05461561870606,1.11681022593471,19.174481752295,18.3582845079895,0.666219523631325,0.809901069559304,0,2.68142840554502,3.56497527374921,1.27316895539409,5.6128571499706,0,0,0.159992422793407,0,0,0,0,0.190023419456374,0.252030129759931,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.503347818173209,21.035502118329,15.4603147605533,0.257259436035947,0,0.515672092277442,0,0,0,0,0,0,0,0,0,0,0,0,0.210324961351382,0,0,0.122490799214954,0,0,0,0.255374676170375,0.307213066512487,0,0.182975287204819,0,1.3959149950069,0,0.15279824777681,0,0,0.372798891650601,0,0.0755715601067855,4.34796733052517,1.72084775396277,0,0,0,0,2.80888840263504,0,0,0,0,0,0,0,0,0,0,1.59857431606684,6.47344709117929,4.75014845007439,1.04091196059682,7.00270600117925,3.22861696158482,6.48107354376277,7.4080885495494,3.26733137457156,3.21353458054686,3.61498392299779,0.884610551949874,1.7794353494215,1.98757366614354,2.42437626567611,0,5.5628351432194,3.97948742945565,1.78819938646014,2.75574786363617,1.19980546198682,1.39777249780371,0.599162557619291,0.457500602818626,0,0.173824320192276,0,0.20778804455956,0.162241263067758,0.712875546952214,1.49288364732112,0.758168275301024,3.78795340595653,0.520481771850815,0.689706313300419,0.360124259610698,0.150704817835715,0.340182495756639,0.640568601424249,0.562210347358373,1.55222022443409,0.646703978798527,0.189106080167819,0.351902248327898,0.657587197282725,0.278047249225598,1.39300866608867,0.61734640922383,0.995171334092466,1.40442637462647,0,0,0.621377317606506,0.938104239924385,1.62055855314913,1.42046841351126,2.16440654922144,2.46827380619805,2.32533944750408,2.41446061259657,3.15266424391358,3.62031669809657,9.68588038066662,10.8632204791447,7.45619935869195,9.66020507280623,10.3338942445486,0.420579897128254,0.205809224758569,0.660837565967596,1.32225283331772,2.13288250535234,2.32236671860439,1.9330119198314,0.80673409849337,1.77902435075896,0.760902504450237,2.84717436926707,2.47048432086016,2.5133520880027,2.58643413653496,1.55971269695296,1.79763881730844,3.02593269824572,2.38969527905241,1.51734320762465,2.39921876480431,1.1270773567308,4.2766778847516,4.07300223052014,4.27828501330943,5.6280518040589,4.28069429140846,5.80895293013087,3.70191491765402,1.77871576252289,0.166845105716094,0.589676985339609,0,0,0.241177159752417,0.25462585178142,1.43848068725405,0.324270453550071,0,0,2.23284568601102,0.936113019343682,1.26289438973556,0.358794827043824,0,37.874403984154,0.189491411770485,1.62964976442026,1.35796068620151,4.92849521405854,6.03022526790537,15.2347930167049,15.0252908850505,17.8127712839996,21.9250042752287,20.4102103881583,44.5708216026807,27.1115421529456,29.0744607748838,0,0,0.491764273019036,3.31124095565679,0.481651769963376,0.117211686592203,0,4.54447668967871,0.315508219416257,1.56175497718655,0.215423397732799,0.238968797952552,0.891194696329576,0.283076530788832,0,1.46127928955656,0.790575555893047,0,0.567760340833074,0.35613120733451,1.62886959353576,1.15479086080775,2.65490276679926,0.242780636154981,0,0.943025398779491,1.47650946440386,1.53717573971964,0.775284879504663,2.90826983582004,1.78248689192361,2.21225730555071,0,2.06271086496374,0,0.18006109403131,0.646793418913773,0.214337035031592,0.886701168211368,0.356737635204141,1.15184314421485,0.304464949114599,3.28540391289194,5.50763384245932,0.661585194164886,1.48397627647332,1.77610869365496,1.14594557363496,1.3130957840345,0.984845398470368,1.45740418314925,0.556275906031529,2.05045056957423,1.44470807574256,1.29636169158798,1.50694765603753,1.36694227721025,1.60144721244566,10.8786195196067,9.23679585336143,7.73919853304773,1.90934123603023,1.10717597753397,0.609958401380546,1.18805874903981,0.418176592028937,1.09181281873089,1.34864346384821,0.909188012978695,1.57053565190418,1.16653475962614,0,0,0.747582730219894,0.330916980914195,0.583353565032143,0.129159823477731,0,0.234714477291508,0.2604087696879,0.104859344425711,0.241584120826006,0.576060012515731,1.58005560314089,1.82452693761148,1.84879722896689,3.37794139742267,1.43221356533985,2.98022032171897,3.12508168751919,1.9199638532695,1.61546319917036,2.13379058634,2.82313318383153,2.0466154955348,2.50150788264857,2.10378423926824,5.44152920676507,0.221985953374065,0.179427713218951,0.839423081820392,1.54551675225752,1.50145980360946,1.09890974560359,1.07184189539533,0.501572104035363,1.6942555278512,0.460325236507177,0,0.343706364687375,0,0,0,0,0,0,0.207574695168353,0,0.512200817262403,0.243106717068294,0.628839487883947,0.919217542250071,1.11123363900808,1.44224540067226,1.60459604795908,1.01078884705519,0.50695859978048,1.69763707247469,1.12369808963859,1.6646539625266,1.14870937911227,0.476293691283074,1.0429589335037,0.964546102318525,1.23625770240992,1.61918812147837,1.02860775715625,1.24233064311536,1.43061713968393,2.47088908274958,1.78807822789128,1.86152137361688,1.46342378298218,2.36762740294059,1.08643291076689,4.48913817326191,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|short_description=p4@Arhgef3
|short_description=p4@Arhgef3
}}
}}

Latest revision as of 20:15, 25 September 2015

Short description:p4@Arhgef3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_4_at_Arhgef3_5end
Coexpression cluster:MCL_coexpression_mm9:2898
Association with transcript: 0bp_to_uc007stq.1_5end
EntrezGene:Arhgef3
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p4@Arhgef3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.32
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E916.01
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E76.76
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F212.87
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E62.05
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F11.12
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E419.17
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E818.36
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.67
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.81
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A22.68
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A43.56
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A61.27
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A35.61
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.16
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.19
Ileum epithelium, pool2.CNhs13232.10253-104C10.25
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.50
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I921.04
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A115.46
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.21
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.00
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.12
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.26
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.31
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.18
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.40
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.15
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.00
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.37
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.08
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G34.35
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F71.72
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A72.81
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.60
accessory axillary lymph node, adult.CNhs10475.1063-29H96.47
adrenal gland, adult.CNhs10508.49-24D74.75
adrenal gland, embryo E14.CNhs11038.406-44C51.04
adrenal gland, embryo E16.CNhs11004.1254-43D67.00
adrenal gland, embryo E17.CNhs11043.1263-45I13.23
adrenal gland, embryo E18.CNhs11026.1262-18F56.48
adrenal gland, neonate N00.CNhs11191.1311-23C17.41
adrenal gland, neonate N25.CNhs11223.1377-27I33.27
amnion, adult pregnant day17.5.CNhs10488.583-22A83.21
aorta, adult.CNhs10498.46-23H13.61
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F51.78
bone (os femoris), neonate N16.CNhs11225.1525-43A61.99
bone (os femoris), neonate N20.CNhs11195.1350-25C32.42
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B25.56
cerebellum, neonate N30.CNhs11135.1395-42I23.98
colon, adult.CNhs10468.36-18H71.79
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C72.76
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D11.20
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D41.40
corpora quadrigemina, adult.CNhs10501.16-22A40.60
corpus striatum, adult.CNhs10487.19-21D80.46
corpus striatum, neonate N00.CNhs11226.630-43F10.00
cortex, adult.CNhs10473.12-14D50.17
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.21
diencephalon, neonate N30.CNhs11201.1388-42B20.16
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.71
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.49
epididymis, adult.CNhs10490.58-23B20.76
eyeball, adult.CNhs10484.31-12G43.79
eyeball, embryo E12.CNhs11016.345-16C60.52
eyeball, embryo E14.CNhs10521.399-16E20.69
eyeball, embryo E15.CNhs10593.426-16C90.36
eyeball, embryo E17.CNhs11023.1261-18D40.15
eyeball, neonate N00.CNhs11207.633-15C60.34
eyeball, neonate N01.CNhs11140.1532-43E70.64
eyeball, neonate N02.CNhs11205.1551-44G80.56
eyeball, neonate N16.CNhs11188.777-19A21.55
forelimb, embryo E11.CNhs10596.335-25E20.65
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.35
forelimb, embryo E14.CNhs10577.413-26A80.66
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C41.39
forelimb, embryo E18.CNhs11008.1520-43B50.62
gonad, embryo E13.CNhs11044.1564-45I61.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C81.40
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.62
heart, embryo E12.CNhs11015.353-12F50.94
heart, embryo E13.CNhs11013.376-3I91.62
heart, embryo E14.CNhs10597.403-26D41.42
heart, embryo E15.CNhs11017.431-16C82.16
heart, embryo E16.CNhs11021.457-17C62.47
heart, embryo E17.CNhs11025.479-18E52.33
heart, embryo E18.CNhs11030.1283-20G32.41
heart, neonate N00.CNhs11213.639-21E33.15
heart, neonate N03.CNhs11221.1349-25I23.62
heart, neonate N10.CNhs11118.749-24G19.69
heart, neonate N16.CNhs11209.782-15G110.86
heart, neonate N20.CNhs11127.821-26I67.46
heart, neonate N25.CNhs11196.1351-25D39.66
heart, neonate N30.CNhs11202.1390-42D210.33
hippocampus, adult.CNhs10478.13-16E80.42
hippocampus, neonate N00.CNhs11228.627-43G10.21
intestinal mucosa, adult.CNhs10506.860-29I30.66
intestine, adult.CNhs10496.178-9A31.32
intestine, embryo E12.CNhs11019.1251-16I52.13
intestine, embryo E13.CNhs11010.381-16D52.32
intestine, embryo E15.CNhs10602.976-16D81.93
intestine, embryo E16.CNhs10585.463-22H40.81
intestine, embryo E17.CNhs10582.482-18D31.78
intestine, embryo E18.CNhs10526.1289-20F70.76
intestine, neonate N00.CNhs11126.644-26D12.85
intestine, neonate N01.CNhs11192.1322-23E92.47
intestine, neonate N06.CNhs11102.688-20B82.51
intestine, neonate N07.CNhs11095.720-20F22.59
intestine, neonate N10.CNhs11098.755-23A51.56
intestine, neonate N20.CNhs11187.827-18D11.80
intestine, neonate N25.CNhs11121.1352-25E33.03
intestine, neonate N30.CNhs11131.1384-42G12.39
kidney, embryo E14.CNhs10606.411-4I91.52
kidney, embryo E15.CNhs10997.434-16F82.40
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I24.28
kidney, embryo E18.CNhs11001.1288-20C74.07
kidney, neonate N00.CNhs11214.646-21G74.28
kidney, neonate N10.CNhs11206.758-6D55.63
kidney, neonate N20.CNhs11113.832-19I14.28
kidney, neonate N25.CNhs11122.1353-25F35.81
kidney, neonate N30.CNhs11203.1385-42H13.70
liver, adult pregnant day01.CNhs10466.508-5B21.78
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.59
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.24
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G41.44
liver, neonate N00.CNhs11117.641-24F40.32
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H22.23
liver, neonate N10.CNhs11115.751-24B90.94
liver, neonate N20.CNhs11220.823-25A31.26
liver, neonate N25.CNhs11198.1368-26H10.36
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B137.87
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F81.63
lung, embryo E15.CNhs11020.432-17C51.36
lung, embryo E16.CNhs10998.458-17B64.93
lung, embryo E17.CNhs10605.480-44A66.03
lung, embryo E18.CNhs10583.1287-20I615.23
lung, neonate N00.CNhs11224.640-42C615.03
lung, neonate N06.CNhs11212.683-20E517.81
lung, neonate N07.CNhs11111.715-19A321.93
lung, neonate N10.CNhs11219.750-23E620.41
lung, neonate N20.CNhs11109.822-18A444.57
lung, neonate N25.CNhs11119.1359-25C727.11
lung, neonate N30.CNhs11133.1394-42H229.07
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H23.31
medulla oblongata, adult.CNhs10477.17-12C20.48
medulla oblongata, neonate N30.CNhs11200.1396-42A30.12
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C24.54
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.56
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.22
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.89
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.46
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.79
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I70.57
ovary, embryo E18.CNhs11040.505-44H70.36
ovary, neonate N00.CNhs11217.1299-22I41.63
oviduct, adult pregnant day01.CNhs10500.988-6G61.15
pancreas, adult.CNhs10486.34-16E42.65
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.94
pancreas, embryo E17.CNhs10599.1558-45G31.48
pancreas, embryo E18.CNhs10580.1535-43I71.54
pancreas, neonate N00.CNhs11105.645-26G90.78
pancreas, neonate N01.CNhs11138.1531-43D72.91
pancreas, neonate N02.CNhs11139.1539-43D81.78
pancreas, neonate N16.CNhs11136.787-43B62.21
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H52.06
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.18
pituitary gland, embryo E13.CNhs11009.370-44C70.65
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B90.89
pituitary gland, embryo E16.CNhs11036.449-43F60.36
pituitary gland, embryo E17.CNhs11039.1265-44F51.15
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I73.29
placenta, adult pregnant day17.CNhs10464.577-18G35.51
prostate, adult.CNhs10470.859-1F80.66
skin, adult.CNhs10492.30-1C31.48
skin, neonate N00.CNhs11124.650-25G41.78
skin, neonate N03.CNhs11215.662-22H31.15
skin, neonate N06.CNhs11097.693-20I51.31
skin, neonate N10.CNhs11108.762-6C40.98
small intestine, neonate N16.CNhs11114.790-21I11.46
spinal cord, adult.CNhs10505.24-13C90.56
spleen, adult.CNhs10465.25-2G22.05
spleen, embryo E16.CNhs11035.461-43C11.44
spleen, embryo E18.CNhs11011.1271-21F21.30
spleen, neonate N10.CNhs11116.752-24D11.51
spleen, neonate N20.CNhs11112.824-19H11.37
spleen, neonate N25.CNhs11099.1354-25G31.60
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C610.88
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C99.24
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D37.74
stomach, adult.CNhs10503.33-1H61.91
stomach, embryo E12.CNhs10588.356-43E31.11
stomach, embryo E15.CNhs10603.1252-16G80.61
stomach, embryo E16.CNhs11022.459-17D41.19
stomach, embryo E17.CNhs11006.1035-18D50.42
stomach, embryo E18.CNhs10999.1286-20C61.09
stomach, neonate N03.CNhs11193.1340-24B81.35
stomach, neonate N07.CNhs11210.718-18A90.91
stomach, neonate N25.CNhs11104.1355-25E41.57
stomach, neonate N30.CNhs11134.1386-42I11.17
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.75
testis, embryo E15.CNhs11034.443-27C50.33
testis, embryo E16.CNhs11033.470-26G50.58
testis, embryo E17.CNhs11029.486-18I50.13
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.23
testis, neonate N07.CNhs11222.726-26I40.26
testis, neonate N10.CNhs11204.763-44D90.10
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E20.58
thymus, adult.CNhs10471.38-12B51.58
thymus, embryo E14.CNhs11041.402-44I41.82
thymus, embryo E15.CNhs11005.430-45I21.85
thymus, embryo E16.CNhs11002.456-26C53.38
thymus, embryo E17.CNhs10581.478-18C11.43
thymus, embryo E18.CNhs10595.1273-19G42.98
thymus, neonate N02.CNhs11181.1541-43F83.13
thymus, neonate N03.CNhs11137.2104-43C71.92
thymus, neonate N06.CNhs11197.681-26C41.62
thymus, neonate N07.CNhs11211.713-19D32.13
thymus, neonate N10.CNhs11194.748-24E42.82
thymus, neonate N20.CNhs11186.820-7A22.05
thymus, neonate N25.CNhs11125.1362-25G72.50
thymus, neonate N30.CNhs11132.1393-42G22.10
tongue, adult.CNhs10499.32-1B45.44
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.18
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.84
urinary bladder, adult.CNhs10481.879-12E41.55
uterus, adult pregnant day19.CNhs10497.590-15F51.50
uterus, adult.CNhs10509.92-27E51.10
vagina, adult.CNhs10502.89-27D51.07
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11.69
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.46
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.34
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.21
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.51
whole body, embryo E14.5.CNhs10578.420-27D20.24
whole body, embryo E14.CNhs10519.395-14B10.63
whole body, embryo E16.CNhs10514.453-14F20.92
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.11
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.44
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.70
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.66
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.15
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.04
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.62
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G52.47
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.79
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.86
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.46
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G52.37
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.09
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G54.49
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.18
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.64
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.55
whole body, embryo E17.5.CNhs10513.490-9F90.96
whole body, embryo E17.CNhs10517.475-3I50.25
whole body, embryo E18.CNhs10516.493-3B31.64
whole body, neonate N00.CNhs10525.657-19C22.58
whole body, neonate N01.CNhs10576.659-23C61.34
whole body, neonate N06.CNhs10515.692-21D11.32
whole body, neonate N10.CNhs10518.761-6B45.56





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
respiratory tract8.38e-1141
respiratory system3.24e-1042
lung3.24e-0814
respiratory tube3.24e-0814
respiration organ3.24e-0814
pair of lungs3.24e-0814
lung primordium3.24e-0814
lung bud3.24e-0814
mixed endoderm/mesoderm-derived structure3.60e-0735
epithelial bud6.78e-0717
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