FFCP PHASE1:Hg19::chr11:5617858..5617934,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr11:5617858..5617934,+
|short_description=p1@TRIM6-TRIM34,p1@TRIM6
|description=CAGE_peak_1_at_TRIM6-TRIM34_5end,CAGE_peak_1_at_TRIM6_5end
|association_with_t...") |
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|description=CAGE_peak_1_at_TRIM6-TRIM34_5end,CAGE_peak_1_at_TRIM6_5end | |description=CAGE_peak_1_at_TRIM6-TRIM34_5end,CAGE_peak_1_at_TRIM6_5end | ||
|association_with_transcript=0bp_to_ENST00000380097,ENST00000511284,NM_001003818,NM_001003819,NM_001198644,NM_001198645,uc001mbd.2,uc001mbe.2,uc001mbf.2,uc010qzk.1,uc010qzl.1_5end | |association_with_transcript=0bp_to_ENST00000380097,ENST00000511284,NM_001003818,NM_001003819,NM_001198644,NM_001198645,uc001mbd.2,uc001mbe.2,uc001mbf.2,uc010qzk.1,uc010qzl.1_5end | ||
|EntrezGene=117854, | |EntrezGene=117854,445372 | ||
|HGNC=16277, | |HGNC=16277,33440 | ||
|UniProt=Q9C030, | |UniProt=Q9C030,B4DDQ5,B2RNG4 | ||
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| ||
}} | }} |
Revision as of 20:49, 13 February 2012
Short description: | p1@TRIM6-TRIM34, p1@TRIM6 |
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Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_TRIM6-TRIM34_5end, CAGE_peak_1_at_TRIM6_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000380097, ENST00000511284, NM_001003818, NM_001003819, NM_001198644, NM_001198645, uc001mbd.2, uc001mbe.2, uc001mbf.2, uc010qzk.1, uc010qzl.1_5end |
EntrezGene: | 117854,445372 |
HGNC: | 33440&submit=Submit 16277, 33440 |
UniProt: | Q9C030B4DDQ5B2RNG4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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Ontology term | p-value | n |
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Ontology term | p-value | n |
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Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.