Personal tools

FFCP PHASE1:Hg19::chr12:56236690..56236701,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 8: Line 8:
|id=chr12:56236690..56236701,-
|id=chr12:56236690..56236701,-
|ontology_enrichment_celltype=CL:0002057!6.40e-33!42;CL:0000860!5.09e-30!45;CL:0002194!2.67e-29!63;CL:0000576!2.67e-29!63;CL:0000040!2.67e-29!63;CL:0000559!2.67e-29!63;CL:0002009!4.95e-28!65;CL:0000839!3.49e-25!70;CL:0000557!1.16e-24!71;CL:0000766!2.86e-22!76;CL:0000763!1.48e-11!112;CL:0000049!1.48e-11!112;CL:0002087!5.82e-11!119;CL:0002031!1.86e-09!124;CL:0000738!8.16e-08!140
|ontology_enrichment_celltype=CL:0002057!6.40e-33!42;CL:0000860!5.09e-30!45;CL:0002194!2.67e-29!63;CL:0000576!2.67e-29!63;CL:0000040!2.67e-29!63;CL:0000559!2.67e-29!63;CL:0002009!4.95e-28!65;CL:0000839!3.49e-25!70;CL:0000557!1.16e-24!71;CL:0000766!2.86e-22!76;CL:0000763!1.48e-11!112;CL:0000049!1.48e-11!112;CL:0002087!5.82e-11!119;CL:0002031!1.86e-09!124;CL:0000738!8.16e-08!140
|ontology_enrichment_celltype_v019=CL:0000860;1.20e-86;33!CL:0002057;1.20e-86;33!CL:0000473;5.24e-70;39!CL:0000234;5.24e-70;39!CL:0000576;1.65e-36;48!CL:0000766;6.69e-26;69!CL:0000763;3.90e-11;100!CL:0002087;3.13e-10;104!CL:0002541;7.91e-08;3!CL:0000738;3.26e-07;136!CL:0000136;8.22e-07;13
|ontology_enrichment_development_v019=CL:0002057;1.33e-55;42!CL:0000049;3.34e-10;108
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019=
|ontology_enrichment_uberon=UBERON:0002405!1.28e-20!115;UBERON:0002371!1.41e-20!80;UBERON:0002390!8.80e-19!102;UBERON:0003061!8.80e-19!102;UBERON:0001474!2.41e-18!86;UBERON:0004765!5.45e-18!101;UBERON:0001434!5.45e-18!101;UBERON:0002193!5.49e-16!112;UBERON:0002204!1.74e-10!167;UBERON:0003081!2.07e-07!216
|ontology_enrichment_uberon=UBERON:0002405!1.28e-20!115;UBERON:0002371!1.41e-20!80;UBERON:0002390!8.80e-19!102;UBERON:0003061!8.80e-19!102;UBERON:0001474!2.41e-18!86;UBERON:0004765!5.45e-18!101;UBERON:0001434!5.45e-18!101;UBERON:0002193!5.49e-16!112;UBERON:0002204!1.74e-10!167;UBERON:0003081!2.07e-07!216
|ontology_enrichment_uberon_v019=UBERON:0003124;7.91e-08;3!UBERON:0000920;7.91e-08;3
|phase1_expression=0.363356758541113,0.428201047781966,0.140954404095971,0,0,0,0,0.631719873426831,0,0,0,0,0,0,0.331397375727916,0,0,0.730310090387373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200544447470142,0,0.447830948479849,0,0.515151135268373,0.436194716338694,1.51150377475524,0.970336244751265,2.55671940596253,13.9797081927421,22.6085650753426,0.863077176966451,6.40401766322752,5.20260905754887,7.58440497620561,11.6187243045089,14.8969135253776,1.69418105588344,8.46009065179322,6.96642801779762,4.28517449319264,11.8743740018155,9.59005688698562,0.329851300186716,1.19678194572979,0,2.03146467040009,9.64554881974938,9.9651559839292,5.02497330513487,11.9941071236646,13.031330682307,4.84319602106695,7.36555271975129,8.86094684834476,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0.130979075497713,0,0,0,0,0.26591592103773,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22452937262617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234321431833797,0,0,0.448346041655403,0.117434498643765,0,0.140450806702248,0.408308342509787,0,0.103325781175765,0,0,0,0,0,0,0.277064115484183,0,0,0.150238058906597,0,0,0,0,0.900273288253207,0,0,0.18611685633159,0.675105328965065,0.0974370051611986,0,0.0920498986422993,0,0.355009592516614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,1.47008711385542,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246217006087397,2.10603838625314,1.18904929830983,0,0,0.283550194484773,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0.102827492703324,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0.791951872933429,0,0,0,0,0,0,0,0,0,0.434343920002738,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0.207970861530807,0.178428988797162,0,0,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0.248107807818777,0,0,0,0.511707249066704,0.160853921143607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0.137836572484531,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0.855877976067841,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0.655894752046633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.470719003883896,0.43050537267123,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.63714722689409,0,0,0,0,0,0,0,0,0,0,0,0.398495976502139,0.552567831062295,0,0,0,0,0,0,0,0.197286811273867,0,0,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34636466614658,0.760531603454056,5.10401855571071,0.0915975934018623,5.33034776018635,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0.176915129006678,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0.195551382734803,0,0.426905989478705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0,0,0,0.429226048136571,0.223171457441873,0.268733889946905,0,0,0,0,0,0,0,0,0,0.160753148465019,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,1.32506888912221,0,0,0,0,0.747511887973863,2.35806457649499,0,0,0,0,0,9.24830265728106,12.7851845951577,22.9759182572596,5.24596209135687,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159296767163702,0,0.155262956876259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354809480650555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.469919589899268,1.54698931136585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0918948995348449,0,0,0,0,0,0,0,0.0645889098360061,0.31037357147929,0,0,0.202117188958219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0
|phase1_expression=0.363356758541113,0.428201047781966,0.140954404095971,0,0,0,0,0.631719873426831,0,0,0,0,0,0,0.331397375727916,0,0,0.730310090387373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200544447470142,0,0.447830948479849,0,0.515151135268373,0.436194716338694,1.51150377475524,0.970336244751265,2.55671940596253,13.9797081927421,22.6085650753426,0.863077176966451,6.40401766322752,5.20260905754887,7.58440497620561,11.6187243045089,14.8969135253776,1.69418105588344,8.46009065179322,6.96642801779762,4.28517449319264,11.8743740018155,9.59005688698562,0.329851300186716,1.19678194572979,0,2.03146467040009,9.64554881974938,9.9651559839292,5.02497330513487,11.9941071236646,13.031330682307,4.84319602106695,7.36555271975129,8.86094684834476,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0.130979075497713,0,0,0,0,0.26591592103773,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22452937262617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234321431833797,0,0,0.448346041655403,0.117434498643765,0,0.140450806702248,0.408308342509787,0,0.103325781175765,0,0,0,0,0,0,0.277064115484183,0,0,0.150238058906597,0,0,0,0,0.900273288253207,0,0,0.18611685633159,0.675105328965065,0.0974370051611986,0,0.0920498986422993,0,0.355009592516614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,1.47008711385542,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246217006087397,2.10603838625314,1.18904929830983,0,0,0.283550194484773,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0.102827492703324,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0.791951872933429,0,0,0,0,0,0,0,0,0,0.434343920002738,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0.207970861530807,0.178428988797162,0,0,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0.248107807818777,0,0,0,0.511707249066704,0.160853921143607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0.137836572484531,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0.855877976067841,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0.655894752046633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.470719003883896,0.43050537267123,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.63714722689409,0,0,0,0,0,0,0,0,0,0,0,0.398495976502139,0.552567831062295,0,0,0,0,0,0,0,0.197286811273867,0,0,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34636466614658,0.760531603454056,5.10401855571071,0.0915975934018623,5.33034776018635,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0.176915129006678,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0.195551382734803,0,0.426905989478705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0,0,0,0.429226048136571,0.223171457441873,0.268733889946905,0,0,0,0,0,0,0,0,0,0.160753148465019,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,1.32506888912221,0,0,0,0,0.747511887973863,2.35806457649499,0,0,0,0,0,9.24830265728106,12.7851845951577,22.9759182572596,5.24596209135687,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159296767163702,0,0.155262956876259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354809480650555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.469919589899268,1.54698931136585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0918948995348449,0,0,0,0,0,0,0,0.0645889098360061,0.31037357147929,0,0,0.202117188958219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0
|short_description=p3@MMP19
|short_description=p3@MMP19
}}
}}

Revision as of 05:25, 10 August 2012

Short description:p3@MMP19
Species:Human (Homo sapiens)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_MMP19_5end
Coexpression cluster:C2220_CD14_mature_chorionic_adipose_breast_Cardiac_choriocarcinoma
Association with transcript: 4bp_to_ENST00000322569_5end
EntrezGene:MMP19
HGNC: 7165
UniProt: Q99542
Genome view:ZENBU


View on UCSC genome browser


Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression




0
5
10
15
20
25




  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data









Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.