FFCP PHASE1:Hg19::chr5:138210954..138210965,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 8: | Line 8: | ||
|id=chr5:138210954..138210965,- | |id=chr5:138210954..138210965,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000047;1.93e-09;2 | |||
|ontology_enrichment_development_v019=UBERON:0006601;6.60e-16;82!UBERON:0010122;5.65e-08;2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.87e-81!82;UBERON:0005743!3.83e-79!86;UBERON:0000073!2.13e-77!94;UBERON:0001016!2.13e-77!94;UBERON:0001049!1.13e-76!57;UBERON:0005068!1.13e-76!57;UBERON:0006241!1.13e-76!57;UBERON:0007135!1.13e-76!57;UBERON:0002780!3.46e-71!41;UBERON:0001890!3.46e-71!41;UBERON:0006240!3.46e-71!41;UBERON:0003080!3.35e-69!42;UBERON:0000955!1.70e-67!69;UBERON:0006238!1.70e-67!69;UBERON:0002616!1.53e-64!59;UBERON:0001893!2.61e-62!34;UBERON:0002020!2.67e-62!34;UBERON:0003528!2.67e-62!34;UBERON:0002791!1.90e-60!33;UBERON:0001869!2.77e-59!32;UBERON:0003075!2.76e-56!86;UBERON:0007284!2.76e-56!86;UBERON:0002346!5.04e-53!90;UBERON:0003056!7.28e-51!61;UBERON:0000956!5.78e-47!25;UBERON:0000203!5.78e-47!25;UBERON:0002619!2.97e-42!22;UBERON:0001950!9.11e-39!20;UBERON:0004121!9.43e-39!169;UBERON:0000153!1.05e-38!129;UBERON:0007811!1.05e-38!129;UBERON:0000033!1.51e-38!123;UBERON:0000924!2.14e-37!173;UBERON:0006601!2.14e-37!173;UBERON:0007023!6.15e-33!115;UBERON:0002420!8.01e-17!9;UBERON:0007245!8.01e-17!9;UBERON:0010009!8.01e-17!9;UBERON:0010011!8.01e-17!9;UBERON:0000454!8.01e-17!9;UBERON:0002308!2.07e-16!9;UBERON:0000125!2.07e-16!9;UBERON:0000025!2.21e-16!194;UBERON:0001871!9.55e-16!7;UBERON:0009663!3.34e-13!7;UBERON:0000475!5.52e-13!365;UBERON:0004111!9.25e-13!241;UBERON:0000200!1.17e-12!6;UBERON:0000064!1.57e-11!219;UBERON:0000483!4.22e-11!309;UBERON:0000477!4.27e-11!286;UBERON:0000119!7.91e-11!312;UBERON:0000349!1.37e-10!5;UBERON:0001872!1.98e-10!5;UBERON:0003076!2.21e-10!15;UBERON:0003057!2.21e-10!15;UBERON:0001894!3.51e-10!7;UBERON:0006222!3.51e-10!7;UBERON:0002021!4.16e-10!5;UBERON:0000369!1.37e-08!4;UBERON:0002435!1.37e-08!4;UBERON:0000204!1.37e-08!4;UBERON:0010082!1.37e-08!4;UBERON:0000481!3.09e-08!347;UBERON:0000480!6.89e-08!626;UBERON:0002298!7.50e-08!8;UBERON:0000467!1.99e-07!625;UBERON:0002771!2.65e-07!3 | |ontology_enrichment_uberon=UBERON:0001017!2.87e-81!82;UBERON:0005743!3.83e-79!86;UBERON:0000073!2.13e-77!94;UBERON:0001016!2.13e-77!94;UBERON:0001049!1.13e-76!57;UBERON:0005068!1.13e-76!57;UBERON:0006241!1.13e-76!57;UBERON:0007135!1.13e-76!57;UBERON:0002780!3.46e-71!41;UBERON:0001890!3.46e-71!41;UBERON:0006240!3.46e-71!41;UBERON:0003080!3.35e-69!42;UBERON:0000955!1.70e-67!69;UBERON:0006238!1.70e-67!69;UBERON:0002616!1.53e-64!59;UBERON:0001893!2.61e-62!34;UBERON:0002020!2.67e-62!34;UBERON:0003528!2.67e-62!34;UBERON:0002791!1.90e-60!33;UBERON:0001869!2.77e-59!32;UBERON:0003075!2.76e-56!86;UBERON:0007284!2.76e-56!86;UBERON:0002346!5.04e-53!90;UBERON:0003056!7.28e-51!61;UBERON:0000956!5.78e-47!25;UBERON:0000203!5.78e-47!25;UBERON:0002619!2.97e-42!22;UBERON:0001950!9.11e-39!20;UBERON:0004121!9.43e-39!169;UBERON:0000153!1.05e-38!129;UBERON:0007811!1.05e-38!129;UBERON:0000033!1.51e-38!123;UBERON:0000924!2.14e-37!173;UBERON:0006601!2.14e-37!173;UBERON:0007023!6.15e-33!115;UBERON:0002420!8.01e-17!9;UBERON:0007245!8.01e-17!9;UBERON:0010009!8.01e-17!9;UBERON:0010011!8.01e-17!9;UBERON:0000454!8.01e-17!9;UBERON:0002308!2.07e-16!9;UBERON:0000125!2.07e-16!9;UBERON:0000025!2.21e-16!194;UBERON:0001871!9.55e-16!7;UBERON:0009663!3.34e-13!7;UBERON:0000475!5.52e-13!365;UBERON:0004111!9.25e-13!241;UBERON:0000200!1.17e-12!6;UBERON:0000064!1.57e-11!219;UBERON:0000483!4.22e-11!309;UBERON:0000477!4.27e-11!286;UBERON:0000119!7.91e-11!312;UBERON:0000349!1.37e-10!5;UBERON:0001872!1.98e-10!5;UBERON:0003076!2.21e-10!15;UBERON:0003057!2.21e-10!15;UBERON:0001894!3.51e-10!7;UBERON:0006222!3.51e-10!7;UBERON:0002021!4.16e-10!5;UBERON:0000369!1.37e-08!4;UBERON:0002435!1.37e-08!4;UBERON:0000204!1.37e-08!4;UBERON:0010082!1.37e-08!4;UBERON:0000481!3.09e-08!347;UBERON:0000480!6.89e-08!626;UBERON:0002298!7.50e-08!8;UBERON:0000467!1.99e-07!625;UBERON:0002771!2.65e-07!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0001869;1.47e-91;32!UBERON:0003528;6.75e-88;34!UBERON:0002020;6.75e-88;34!UBERON:0002791;3.55e-86;32!UBERON:0001893;2.71e-82;34!UBERON:0002619;1.15e-81;22!UBERON:0000956;4.24e-78;25!UBERON:0000203;4.24e-78;25!UBERON:0002780;1.14e-75;41!UBERON:0001890;1.14e-75;41!UBERON:0001950;9.15e-75;20!UBERON:0000073;9.55e-55;53!UBERON:0002616;9.55e-55;53!UBERON:0000955;1.51e-37;68!UBERON:0001017;4.62e-35;75!UBERON:0001016;1.07e-32;83!UBERON:0001871;8.46e-26;6!UBERON:0002420;2.79e-25;9!UBERON:0007245;2.79e-25;9!UBERON:0010009;2.79e-25;9!UBERON:0010011;2.79e-25;9!UBERON:0000454;2.79e-25;9!UBERON:0000125;1.57e-24;9!UBERON:0002308;1.57e-24;9!UBERON:0000200;2.89e-23;6!UBERON:0000349;2.95e-19;5!UBERON:0001872;8.03e-19;5!UBERON:0009663;2.43e-18;7!UBERON:0002021;2.95e-18;5!UBERON:0002784;2.37e-16;4!UBERON:0000369;3.04e-15;4!UBERON:0002435;3.04e-15;4!UBERON:0000204;3.04e-15;4!UBERON:0001894;5.56e-14;7!UBERON:0001870;5.22e-13;3!UBERON:0007023;2.19e-12;114!UBERON:0011216;5.79e-12;132!UBERON:0005383;1.51e-11;3!UBERON:0005382;1.51e-11;3!UBERON:0000988;3.97e-11;3!UBERON:0001905;1.93e-09;2!UBERON:0002757;1.93e-09;2!UBERON:0010134;1.93e-09;2!UBERON:0005408;1.93e-09;2!UBERON:0001899;1.93e-09;2!UBERON:0002702;3.11e-09;2!UBERON:0002771;4.36e-09;2!UBERON:0010314;4.72e-09;132!UBERON:0001876;7.69e-09;2!UBERON:0001897;1.24e-08;2!UBERON:0010225;1.24e-08;2!UBERON:0001954;2.00e-08;2!UBERON:0003022;2.00e-08;2!UBERON:0002421;2.00e-08;2!UBERON:0002600;2.00e-08;2!UBERON:0001873;5.65e-08;2!UBERON:0002148;5.65e-08;2!UBERON:0001875;5.65e-08;2!UBERON:0006331;5.65e-08;2!UBERON:0009662;5.65e-08;2!UBERON:0006514;5.65e-08;2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.28988789704845,0.958120975510189,0.627713197974014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236482229888585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0.661743720148475,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438977620880838,0,0,0,0,0,0,0,0,0,0,0,0,0.252433774244115,0,0,0.355009592516614,0.10075209822764,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.39116485970092,0,0.144366447761074,0.925971025153221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.38512259934129,10.4111883086097,3.09315525111078,5.69555302136786,3.82763250991898,0,0,0,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164254312027618,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107420244868274,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318203247925937,0,0.359744915166629,0.274537029736055,0.117812402345686,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0.202910376962704,0,0,0.143411352204052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.97659059106519,3.09472716103128,0,0,0,0,0.276283915531148,0,0.511343412510774,0,0,0,0,0,0,0,0,0.969332746095218,3.24688343566479,1.99613798001194,0,0,0,0,0,0,0,0,0.520874984799877,1.77148277162768,1.92954301800653,0,0.774054819518572,1.18219047581419,5.70402032600329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0,0.611030144933625,0,0,0,0.741412462787447,0,2.57690890297873,0,0,0,0,1.20990716048664,2.14250933141343,0.126373159256976,0.751617097072463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.677942222341597,0,0,5.31810686029381,0,0,0,0,0,0,0,0,0,0,0,0.104602846312333,0,0,1.80126086612937,1.64286454670392,0,0,2.89176089707246,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.38568906942791,2.58786471611994,0,0,0,0,0,3.76647251279753,0,0.0788057072991982,0.157363764404994,0,0,0,0,0,0,0,0,0,0,0,0,0.226624183040251,0,0,1.93924434542326,1.58679122091228,0,0,0,0,0,0,0.988058159489721,0,0,0,0,0,0,0,6.2024772597689,6.46739203980405,4.13130071331449,0,0.776503360757966,0.558867626472451,0.553394539744923,0,0,0,0,0,0,0,0,0,0.189403005275089,0.251567901752575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308801447160972,0,0,0,0,0.512483037175893,0,0,3.45646090379327,0,0,0,0,0,0,0,0,0,0,0,0,0,0.76736622782191,0.431299245586727,0,1.85656384926424,0,0,0,0,0,0,0.80057074828547,0,0.3062454773532,4.04644118107695,1.41696576325585,2.71377560397157,2.46139637088906,3.52900374710405,1.86724581653388,4.84426936895553,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.10672889244615,2.34323429584154,4.75379631952723,2.85371145872581,3.28184885410932,0,0,0,0,7.49982570229601,16.8141861109412,0,0.227662191351298,0,0,0,1.22345519358297,1.97318320688547,0,0,0,3.61365856806804,0,0,0,0,0.214429632529969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439762066981716,0,0,0,0,0,0,3.33724394095407,0.297046400327086,0.4226557275834,0,0,0,0,0,0,0,0,0,0.716697915757256,0,1.90376172534561,2.18175345170189,0,0,0,0,0,0,0,0,0,0,0,0,0,3.31667775783512,2.79269088827117,0,0,0.0645889098360061,0.124149428591716,0,0,0,0,0,0,0,0.332660356546013,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.28988789704845,0.958120975510189,0.627713197974014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236482229888585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0.661743720148475,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438977620880838,0,0,0,0,0,0,0,0,0,0,0,0,0.252433774244115,0,0,0.355009592516614,0.10075209822764,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.39116485970092,0,0.144366447761074,0.925971025153221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.38512259934129,10.4111883086097,3.09315525111078,5.69555302136786,3.82763250991898,0,0,0,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164254312027618,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107420244868274,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318203247925937,0,0.359744915166629,0.274537029736055,0.117812402345686,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0.202910376962704,0,0,0.143411352204052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.97659059106519,3.09472716103128,0,0,0,0,0.276283915531148,0,0.511343412510774,0,0,0,0,0,0,0,0,0.969332746095218,3.24688343566479,1.99613798001194,0,0,0,0,0,0,0,0,0.520874984799877,1.77148277162768,1.92954301800653,0,0.774054819518572,1.18219047581419,5.70402032600329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0,0.611030144933625,0,0,0,0.741412462787447,0,2.57690890297873,0,0,0,0,1.20990716048664,2.14250933141343,0.126373159256976,0.751617097072463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.677942222341597,0,0,5.31810686029381,0,0,0,0,0,0,0,0,0,0,0,0.104602846312333,0,0,1.80126086612937,1.64286454670392,0,0,2.89176089707246,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.38568906942791,2.58786471611994,0,0,0,0,0,3.76647251279753,0,0.0788057072991982,0.157363764404994,0,0,0,0,0,0,0,0,0,0,0,0,0.226624183040251,0,0,1.93924434542326,1.58679122091228,0,0,0,0,0,0,0.988058159489721,0,0,0,0,0,0,0,6.2024772597689,6.46739203980405,4.13130071331449,0,0.776503360757966,0.558867626472451,0.553394539744923,0,0,0,0,0,0,0,0,0,0.189403005275089,0.251567901752575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308801447160972,0,0,0,0,0.512483037175893,0,0,3.45646090379327,0,0,0,0,0,0,0,0,0,0,0,0,0,0.76736622782191,0.431299245586727,0,1.85656384926424,0,0,0,0,0,0,0.80057074828547,0,0.3062454773532,4.04644118107695,1.41696576325585,2.71377560397157,2.46139637088906,3.52900374710405,1.86724581653388,4.84426936895553,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.10672889244615,2.34323429584154,4.75379631952723,2.85371145872581,3.28184885410932,0,0,0,0,7.49982570229601,16.8141861109412,0,0.227662191351298,0,0,0,1.22345519358297,1.97318320688547,0,0,0,3.61365856806804,0,0,0,0,0.214429632529969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439762066981716,0,0,0,0,0,0,3.33724394095407,0.297046400327086,0.4226557275834,0,0,0,0,0,0,0,0,0,0.716697915757256,0,1.90376172534561,2.18175345170189,0,0,0,0,0,0,0,0,0,0,0,0,0,3.31667775783512,2.79269088827117,0,0,0.0645889098360061,0.124149428591716,0,0,0,0,0,0,0,0.332660356546013,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p4@LRRTM2 | |short_description=p4@LRRTM2 | ||
}} | }} |
Revision as of 12:47, 9 August 2012
Short description: | p4@LRRTM2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_LRRTM2_5end |
Coexpression cluster: | C257_pineal_insula_frontal_occipital_temporal_medial_paracentral |
Association with transcript: | 13bp_to_ENST00000274711_5end |
EntrezGene: | LRRTM2 |
HGNC: | 19409 |
UniProt: | O43300 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|
Ontology term | p-value | n |
---|
Ontology term | p-value | n |
---|
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.